mRNA_M-pyrifera_M_contig113049.2712.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A7S4IHI1_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IHI1_9EUKA) HSP 1 Score: 103 bits (258), Expect = 1.700e-25 Identity = 47/83 (56.63%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 112 GCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDYI 360
G L+P HP +D FLVP WK+ WHIDG+ N S + P+G +MQFT+LVGVLL+DLP E+SGNLAV+P SH++IQD++
Sbjct: 20 GHLEP--HPFTESND--FLVPRKWKEFWHIDGVSNSFTSGIIPQGHIMQFTLLVGVLLKDLPHEFSGNLAVYPGSHLAIQDFV 98
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: L8H8I4_ACACA (Phytanoyl-CoA dioxygenase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8I4_ACACA) HSP 1 Score: 103 bits (258), Expect = 1.080e-23 Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 1 ILDLLYKSPLLSYAELLIGRVKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
I DLLYK+ L A+ LIG+ + GQIALRFPG + C+ P L G T F+ P GW WHIDG+ + + PRG V FT+L+GVLL D+P+ SGNL VFP H+++Q++
Sbjct: 252 ITDLLYKTAALPLAQSLIGKTHPGFGGQIALRFPGFS-CIPSGDVPWL-GSATSFVYPEGWHQGWHIDGLHSPFSGV--PRGQVHNFTILLGVLLGDVPEPMSGNLTVFPGGHLALQNH 366
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A831TR36_9BACL (Uncharacterized protein n=1 Tax=Paenibacillaceae bacterium TaxID=2003592 RepID=A0A831TR36_9BACL) HSP 1 Score: 72.0 bits (175), Expect = 9.850e-13 Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 7 DLLYKSPLLSYAELLIGR--VKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
DL+ K+P L +AE +IG+ +K + GQIALRFP + +A+ K +H+DGI ++ N T FTML+G+++ DLP E SGNL V+P SH+ ++Y
Sbjct: 76 DLIIKTPTLDFAESIIGKDKIKPVHMGQIALRFPS----MQEKAN----------------KPGYHLDGIYSENNGV--KEKTYHNFTMLLGIMMSDLPHENSGNLTVWPGSHLLYEEY 172
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A1H1YR10_9ACTN (Phytanoyl-CoA dioxygenase (PhyH) n=3 Tax=Actinopolymorpha TaxID=117156 RepID=A0A1H1YR10_9ACTN) HSP 1 Score: 70.9 bits (172), Expect = 2.910e-12 Identity = 47/121 (38.84%), Postives = 58/121 (47.93%), Query Frame = 1
Query: 1 ILDLLYKSPLLSYAELLIGR--VKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
I DLL++SPL AE IG + GQIALRFP DP A HIDG+ + N P+GT+ FT LVGV L D+P Y+GN V+P SH + Y
Sbjct: 67 ITDLLHRSPLWEVAESAIGEGAIAPVNAGQIALRFPTPGTPHDPHA---------------------HIDGMYSPHNGV--PKGTIANFTALVGVFLSDVPTSYAGNFTVWPGSHRQYEGY 164
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A830HKN3_9CHLO (CUE domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HKN3_9CHLO) HSP 1 Score: 68.9 bits (167), Expect = 3.380e-11 Identity = 38/95 (40.00%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 79 GQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPA--GWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
GQIALRFPG C + + D D G + +WHIDGIP + N + G + F L GVLL D+ + SG L V+P SHV + +Y
Sbjct: 283 GQIALRFPGDA-CPNATNYDDXXXXDVRISASHFDGVRRYWHIDGIPGESNGLSY--GKIHNFDCLCGVLLSDVQEPMSGELCVYPGSHVELAEY 374
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: UPI00166934D1 (phytanoyl-CoA dioxygenase family protein n=1 Tax=Alicyclobacillus cellulosilyticus TaxID=1003997 RepID=UPI00166934D1) HSP 1 Score: 66.2 bits (160), Expect = 1.370e-10 Identity = 46/121 (38.02%), Postives = 61/121 (50.41%), Query Frame = 1
Query: 1 ILDLLYKSPLLSYAELLIGR--VKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
I DLL K+P AE ++G ++ QIALRFP DP P VP H+DG+ + N P GT+ FTMLVGVLL D+ +EY+GN V+P +H + Y
Sbjct: 66 ITDLLNKTPAWELAESVLGEGNIRPVTSAQIALRFPV---LQDPPKPP----------VP-------HLDGMHSPHNGV--PAGTIQNFTMLVGVLLSDVTREYAGNFTVWPGTHRLYEQY 164
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A6I5VNT4_9ACTN (Uncharacterized protein n=2 Tax=Microlunatus sp. Gsoil 973 TaxID=2672569 RepID=A0A6I5VNT4_9ACTN) HSP 1 Score: 63.2 bits (152), Expect = 1.780e-9 Identity = 47/121 (38.84%), Postives = 57/121 (47.11%), Query Frame = 1
Query: 1 ILDLLYKSPLLSYAELLIGR--VKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
IL LL +PL S AE +IG + HGQIALRFP T E HP HIDG+ N +GT+ FT LVGV L D P +GN V+P +H + DY
Sbjct: 65 ILSLLVDTPLWSMAESVIGEGTLLPVTHGQIALRFP--TNGPAAEIHP-------------------HIDGMYTPDNGV--KKGTIANFTALVGVYLSDTPTPDAGNFTVWPGTHRTYADY 162
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A2E4MU87_9BACT (Uncharacterized protein n=3 Tax=FCB group TaxID=1783270 RepID=A0A2E4MU87_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 2.820e-8 Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 10 LLYKSPLLSYAELLIG--RVKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
LL +P S AE IG R++ GQIA+RFP + DPE L G H+DG + N P+ T+ FTML+GV L ++ E+SGNLA++P +HV + Y
Sbjct: 69 LLNDTPAWSLAESAIGKGRIQPVNRGQIAIRFPVAG---DPE------------LTLGG-----HLDGRHSPTNGV--PKDTIRNFTMLLGVSLSEVRTEWSGNLALWPGTHVLYEAY 164
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A3R7MRQ3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MRQ3_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 3.660e-7 Identity = 41/118 (34.75%), Postives = 56/118 (47.46%), Query Frame = 1
Query: 1 ILDLLYKSPLLSYAELLIG--RVKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSI 348
+LDL Y S + Y E L+G +V QIALRFP +P+ TE WH DG+ +G FT+L G+ L ++P+ SGNL VFP SHV++
Sbjct: 246 VLDLYYLSDVCKYVEALVGADQVVPPQGAQIALRFPELGEPREPQG--------TE----------WHTDGMR---------QGRKHPFTLLAGIALSNVPEPLSGNLTVFPGSHVAL 336
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Match: A0A6B0YBS0_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6B0YBS0_9GAMM) HSP 1 Score: 51.6 bits (122), Expect = 1.730e-5 Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 1
Query: 34 SYAELLIG--RVKRCYHGQIALRFPGSTGCLDPEAHPDLHGHDTEFLVPAGWKDHWHIDGIPNQLNSALFPRGTVMQFTMLVGVLLQDLPKEYSGNLAVFPRSHVSIQDY 357
S+ L+G RV R QIALRFP G L A + G+ T +G+P+ G V FTML+G++L D+P +SGN +P +H ++ Y
Sbjct: 78 SHVRALLGDRRVVRPKGCQIALRFPLPEGTLRRVAGGHIDGYHTAR------------NGVPDD--------GIVRSFTMLLGIMLSDVPIPFSGNFTAWPGTHRDLERY 167 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113049.2712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig113049.2712.1 >prot_M-pyrifera_M_contig113049.2712.1 ID=prot_M-pyrifera_M_contig113049.2712.1|Name=mRNA_M-pyrifera_M_contig113049.2712.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp ILDLLYKSPLLSYAELLIGRVKRCYHGQIALRFPGSTGCLDPEAHPDLHGback to top mRNA from alignment at M-pyrifera_M_contig113049:24..461- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig113049.2712.1 ID=mRNA_M-pyrifera_M_contig113049.2712.1|Name=mRNA_M-pyrifera_M_contig113049.2712.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig113049:24..461- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig113049:24..461- >mRNA_M-pyrifera_M_contig113049.2712.1 ID=mRNA_M-pyrifera_M_contig113049.2712.1|Name=mRNA_M-pyrifera_M_contig113049.2712.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig113049:24..461- (Macrocystis pyrifera P11B4 male)back to top |