mRNA_M-pyrifera_M_contig10126.270.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10126.270.1 vs. uniprot
Match: D7FKU3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU3_ECTSI) HSP 1 Score: 479 bits (1234), Expect = 1.880e-164 Identity = 274/437 (62.70%), Postives = 301/437 (68.88%), Query Frame = 1 Query: 1 MRVANGSQPFRRDPEGSLGRSGEFRLNEGRRDSGLHHEIEP-LIGLSHDRHDHP-EELSVHRI--LVRRCAFPFARRIPRILKRRTAQFFITVWLCWIVAACAEWRAQHNLKTLRKQLVAFLQETAFYVEEEGRLSEAWQSPLQRRLASDFD-EPVHGLVHAGRSPIGSATKNRIDGAGRLRGAAAGEQTHRGDARGPVETAKFADKAQVESDGPVHGLHTYFQSGGGENDLAHDRDLRSQ--ARDH-SCPLIYAVDAVTAKEHGLHLFQEELELLGTVTARLCRCLCDVPIPHAQEQPE-VRATNNGQEKDDGQDNAETVRTRRKLGVCKGEAHTLMLEEMLKGANVVISGDSGWFYEWFASMQDAYHRTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAGWRPFRNPIDAVRHGFNFMQYKLRQFQV 1284 MR++NGSQ FRRD EG LGR EG +E EP L + HDHP EELSVHRI L RRCAFPFARRIPR+ KRRT Q + +WLCWIVAAC EWRAQHNL+ RKQLVAFLQET FYV EEGRLSE+WQSPLQRRL D EPV G G + G +R + + G G RG +A + D ++ S G G Q ++ R LR Q A H SCPLIY VDA TAK+HGL LFQEELELLGTVTARLCRCLC P+ H Q+ P+ R T D G +AE R R+LGVC+GEAH LMLEEMLKGANVVISGDSGWFY WF SMQDAY RTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGA WRPFR+PIDAVRHGFNFMQYKLRQ QV Sbjct: 1 MRLSNGSQTFRRDSEGLLGRG------EGP------NETEPFLFQQGENDHDHPAEELSVHRIQVLARRCAFPFARRIPRVTKRRTGQVLLILWLCWIVAACIEWRAQHNLRRSRKQLVAFLQETTFYVVEEGRLSESWQSPLQRRLTLHVDGEPVVG----GEARHGEEDSDRQRHSSNS--SPVGVDRDLGRIRGGFSSAGYGDSEEMPSGGFSGGSQASRQHRERADEWLRQRRLRPQGSAEGHESCPLIYTVDAKTAKKHGLLLFQEELELLGTVTARLCRCLCHSPVVHTQDHPQGQRRTAFAAASDSGHKSAEAERPHRRLGVCEGEAHALMLEEMLKGANVVISGDSGWFYRWFESMQDAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQV 419
BLAST of mRNA_M-pyrifera_M_contig10126.270.1 vs. uniprot
Match: A0A6G0XQ13_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQ13_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.660e-22 Identity = 47/101 (46.53%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 985 MLEEMLKGANVVISGDSGWFYEWFASMQ-DAYHRTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAGWRPFRNPIDAVRHGFNFMQYKLRQFQV 1284 ++ E++KGA+V+I D+G FYE F ++ D Y R SH+S G+P+G++L T+LTGT DSWFQ EGA W PF+ P+D+ H N+++YK+R QV Sbjct: 133 LMMEVVKGAHVIIENDNGRFYELFKTISSDTYSRISSHYSNDVQYGVPQGSLLDTLLTGTTSANDSWFQFEGANWDPFQRPVDSFLHCLNYIEYKIRGVQV 233
BLAST of mRNA_M-pyrifera_M_contig10126.270.1 vs. uniprot
Match: A0A836C7N5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N5_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.060e-21 Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 1 Query: 721 SCPLIYAVDAVTAKEHGLHLFQEELELLGTVTARLCRCLCDVPIPHAQEQPEVRATNNGQEKDDGQDNAETVRTRRKLGVCKGEAHTLMLEEMLKGANVVISGDSGWFYEWFASMQDAYHRTCSHF 1098 SCPL+Y + A AK +GL L +EEL+LLGT+ R+C+C+C +P + Q A + R L VC A T+ E+L+GANVV+ GD GW+Y WF MQDAY RT SH+ Sbjct: 190 SCPLLYTLSAAKAKTYGLSLAEEELQLLGTLMVRICKCVCPFQLPESATQL-----------------AGHLPGHRVLRVCDESAGTVA--EILRGANVVVDGDGGWYYRWFQRMQDAYKRTSSHY 296
BLAST of mRNA_M-pyrifera_M_contig10126.270.1 vs. uniprot
Match: A0A1V9ZMZ5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMZ5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.600e-18 Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 985 MLEEMLKGANVVISGDSGWFYEWFASMQDA-YHRTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAGWRPFRNPIDAVRHGFNFMQYKLRQFQV 1284 +L E+LKGA+VV+ D+G FY ++ Y R SH S + +P+G +L T+LTGT + DSWFQ EGA W P P+D++ H N+++YK+R Q+ Sbjct: 126 VLMELLKGAHVVVENDAGVFYGLLKNISTTTYPRISSHVSVATQYAVPQGPLLDTLLTGTTLSNDSWFQFEGANWDPVERPVDSMLHVLNYVEYKIRGVQI 226
BLAST of mRNA_M-pyrifera_M_contig10126.270.1 vs. uniprot
Match: A0A1V9ZN05_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZN05_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.000e-18 Identity = 42/101 (41.58%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 985 MLEEMLKGANVVISGDSGWFYEWFASMQDAYH-RTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAGWRPFRNPIDAVRHGFNFMQYKLRQFQV 1284 +L+++L+GA+VV++ D G++Y+ F ++ A H R SHFST L +P+G +L T+L G + DSWFQLEG+ W P P+D++ H N+++Y + QV Sbjct: 115 LLQDILRGAHVVVAYDRGFYYDLFRNLSTAVHTRQSSHFSTAPQLAVPQGPLLNTLLMGKTIEHDSWFQLEGSTWDPISRPMDSLVHVLNYLEYCVGGVQV 215 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10126.270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10126.270.1 >prot_M-pyrifera_M_contig10126.270.1 ID=prot_M-pyrifera_M_contig10126.270.1|Name=mRNA_M-pyrifera_M_contig10126.270.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=431bp MRVANGSQPFRRDPEGSLGRSGEFRLNEGRRDSGLHHEIEPLIGLSHDRHback to top mRNA from alignment at M-pyrifera_M_contig10126:6817..10499+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10126.270.1 ID=mRNA_M-pyrifera_M_contig10126.270.1|Name=mRNA_M-pyrifera_M_contig10126.270.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3683bp|location=Sequence derived from alignment at M-pyrifera_M_contig10126:6817..10499+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10126:6817..10499+ >mRNA_M-pyrifera_M_contig10126.270.1 ID=mRNA_M-pyrifera_M_contig10126.270.1|Name=mRNA_M-pyrifera_M_contig10126.270.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2586bp|location=Sequence derived from alignment at M-pyrifera_M_contig10126:6817..10499+ (Macrocystis pyrifera P11B4 male)back to top |