mRNA_M-pyrifera_M_contig113.2699.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig113.2699.1
Unique NamemRNA_M-pyrifera_M_contig113.2699.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: D7G2Q9_ECTSI (FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q9_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 8.910e-143
Identity = 207/253 (81.82%), Postives = 230/253 (90.91%), Query Frame = 2 
Query:  122 MAGDVDETKGVTVDLAEYKGGAITVKVPRMEISDAQVEAALKASKKPYKLIPVRFVEEGGTKMGHTVIMNWEAKVNGAVVPGAKKENFELEFKEGHDAPWNTFATNMAVGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDELRTLLRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNADKVLNAVSWAKFGERSTLDFKWNCIKEKIASVEGIEPREVSTLLRSEADVVVVDK 880
            MAGD+DETKGVTVDLAEYKGGA+TV+VP +EI++AQVEAAL+ SKKPYKLIPVRFVEEGGTKMGHTVIMNW+AKV+G  VPGAKKENFELEFKEGH  PW TFAT MAVGMGQMETKVFPATFP+DFEIEGLRGK ALVQAVVK+IARKE K PETRSDDE+R  LR KGEQT++NRTD+AVDEA+KK LL SC+VNADKVLNAVSWAKFGE+STLDFKWNCIKEKIA  EGIEPR V   LR EA+V++++K
Sbjct:    1 MAGDLDETKGVTVDLAEYKGGAVTVRVPLIEITEAQVEAALQKSKKPYKLIPVRFVEEGGTKMGHTVIMNWDAKVDGRPVPGAKKENFELEFKEGHPEPWATFATKMAVGMGQMETKVFPATFPEDFEIEGLRGKQALVQAVVKNIARKEVKEPETRSDDEVRAALRVKGEQTVKNRTDKAVDEAVKKFLLSSCNVNADKVLNAVSWAKFGEQSTLDFKWNCIKEKIAVAEGIEPRAVVEFLRDEAEVILMEK 253
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BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A4D9CVA6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVA6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 7.610e-51
Identity = 118/268 (44.03%), Postives = 159/268 (59.33%), Query Frame = 2 
Query:  122 MAGDVDET--KGVTVDLAEYKGGAITVKVPRMEISDAQVEAALK-ASKKPYKLIPVRFVEEGGTKMGHTVIMNWEAKV------------NGAVVPGAKKENFELEFKEGHDAPWNTFATNMAVGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDELRTLLRAKGEQTMQNRTDQAV-DEAI---KKALLDSCDVNADKVLNAVSWAKFGERSTLDFKWNCIKEKIASVEGIEPREVSTLLRSEADVV 868
            M G++  T  KG  V L  YK GA++   P+  +SDA+VEA +K A+KK +KL PVRFVEEGGT+MGHTV+ +W+A               GAV+P A  +NF LE KE    P  +FA  +A GMGQMETKVF    P+   IE  RG  A +  +V+SI  KE+   + RS +E +  +RA+    +Q +TD A   EAI   +  LL++     +K+  +VSWAKFGE S  DFKW+ I+E IA+ EGI+  EV + L  E  VV
Sbjct:    1 MTGEMASTSAKGA-VTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTFKLTPVRFVEEGGTRMGHTVVCDWKATYVSGGDPAKHSLRPGAVLPRADIKNFVLELKEDQSEPLASFARAVASGMGQMETKVFEVAMPESATIESWRGVTAKIMLLVRSINIKENLAADGRSIEEKQAAVRAE----LQAKTDAAARQEAIAHFRAILLETTQTETEKMQESVSWAKFGENSLKDFKWSLIQEAIAAAEGIDFSEVPSFLLRENPVV 263
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BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A7S0VQZ5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VQZ5_9CRYP)

HSP 1 Score: 177 bits (448), Expect = 2.790e-49
Identity = 101/237 (42.62%), Postives = 140/237 (59.07%), Query Frame = 2 
Query:  122 MAGDVDETKGVTVDLAEYKGGAITVKVPRMEISDAQVEAALKASKKPYKLIPVRFVE-EGGTKMGHTVIMNWE--AKVNGAVVPGAKKENFELEFKEGHDAPWNTFATNMAVGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDELRTLLRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNADKVLNAVSWAKFGERSTLDFKWNCIKEKIASVEGIE 823
            M G     K   V L +Y G ++T+  PR E+S+A V   LK + K Y+L   RF + EGG +MGHTV++N+   +   GA + G K   +ELE KEG   PW+TFA+N+AVGMGQ E K F  TFP D+ +  L+GK    +  VK I +K  K P+TR ++  R    A+ E  ++    + VD+A++  L+ +C  +  K   AVSWAKFGERSTLD +W  IKE I   EGI+
Sbjct:   67 MQGGSGGDKNAEVTLGQYTGLSVTL--PRAEVSEAAVAKILKENAKDYRLESARFTDGEGGARMGHTVLINFVGYSPETGAELKGTKANMYELELKEGQKEPWSTFASNIAVGMGQDEMKSFVVTFPGDYAVPALQGKQVRFETYVKKIMKKVAKDPDTRQEEVQRADAVAQLEAAIERNNLEKVDQALRLELMKTCAADTTKATEAVSWAKFGERSTLDLQWQIIKEAIGREEGIK 301
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BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A388KP71_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KP71_CHABU)

HSP 1 Score: 159 bits (402), Expect = 1.880e-41
Identity = 94/245 (38.37%), Postives = 138/245 (56.33%), Query Frame = 2 
Query:  152 VTVDLAEYKGGAITVKVPRMEISDAQVEAALKASK-KPYKLIPVRFVEEGGTKMGHTVIMNWEAKV-----NGAVVPGAKKENFELEFKEGHDAPWNTFATNMA-VGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDELRTLLRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNADKVLNAVSWAKFGERSTLDFKWNCIKEKIASVEGIEPREVSTLLRSEADV 865
            V V L  YKGG I VK  + E++D +VE A K  + K ++   + F   G  K+GHTV +N+E K      +G ++ G K + ++LE KE  D PW  F   +   GMGQ E+K F   FP DF+   LR   A     VK+I  K++ P +TR + E R  ++ +     + +++  +D  I+ ALL+S + + DK+ + VSWAKFGE S  DFKWN + E++A VE I   +V   LR EAD+
Sbjct:  181 VKVVLGPYKGGVIKVKATKHEVTDEEVERAFKEKREKTHEFERINFTGSGA-KLGHTVKINFEGKYAEGPKSGQLIQGTKADMYDLELKERPDYPWKRFVEEITGTGMGQEESKTFMVVFPPDFKAPHLRNVKARFTVTVKAIGVKKELPKDTRPEHEQREEIKDELVAAEERKSNAQIDPEIRSALLESSEADVDKIASNVSWAKFGENSLKDFKWNLLMEEVARVENIAFEDVMPFLRREADI 424
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BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A1Y1I108_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I108_KLENI)

HSP 1 Score: 142 bits (359), Expect = 6.320e-36
Identity = 89/245 (36.33%), Postives = 132/245 (53.88%), Query Frame = 2 
Query:  152 VTVDLAEYKGGAITVKVPRMEISDAQVEAALKASK-KPYKLIPVRFVEEGGTKMGHTVIMNWEAKVN-----GAVVPGAKKENFELEFKEGHDAPWNTFATNMAV-GMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDELRTLLRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNADKVLNAVSWAKFGERSTLDFKWNCIKEKIASVEGIEPREVSTLLRSEADV 865
            V + L  YK GAI V   + E+S+ ++E ALKA   K Y    + F   G  K+GH V +++E K +     G ++ G K + FELE +   D PW TF   +   GMGQ E+K F  TFP D++   LR   A     V  I  K+    + R +  +R  + A    T + +T+  +D+ +++ LL++ + + DKV  +VSWAKFGE+S  DFKWN + E++A  E IE  E    LR +A V
Sbjct:  102 VKIALGPYKDGAIKVSAKKFEVSNDEIEKALKAKLGKTYDFERINFTGSGA-KIGHMVKVSFEGKYSDGPNAGQLIRGTKADFFELELQPREDDPWKTFVEQIVKNGMGQEESKSFTLTFPADYKAVPLRNVAARFTVTVHEIGIKKMLEKDPRPEAAIRADIEADLRATAERKTNDLIDQEVRRVLLETSEADVDKVAASVSWAKFGEKSLQDFKWNLLLEEVARNEKIEFEEAKAFLRRQATV 345
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BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A7R9Y821_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y821_9VIRI)

HSP 1 Score: 139 bits (351), Expect = 1.040e-35
Identity = 89/248 (35.89%), Postives = 133/248 (53.63%), Query Frame = 2 
Query:  152 VTVDLAEYKGGAITVKVPRMEISDAQVEAALKASK-KPYKLIPVRFVEEGGTKMGHTVIMNWEAKVN------GAVVPGAKKENFELEFKEGHDAPWNTFATNMA-VGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDE-LRTLLRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNADKVLNAVSWAKFGERSTLDFKWNCIKEKIASVEGIEPRE-VSTLLRSEADV 865
            V V L EYKGGA+ V+  +    +A V+A L+    K ++L+ V F   G   MGHTV +   A         G  VPG   ++  ++ K  +  P N F   +   GMGQME+K FP  FPDD++ E LRG   L   ++K IA K   P  T +D   LR  + A+ ++  +  + +  D AI+ ALLD C+V+  K + +V+WAKFGE S  D+ ++ I E+I   EG+  ++ +   LR EA +
Sbjct:    7 VDVKLCEYKGGALCVRADKSVADEAAVDAELEEEMAKEFELVRVNFTGSGAA-MGHTVKLEMSATFGPGHQHAGQPVPGMTVDDLSVDLKTSNPFPLNHFVQAIVEAGMGQMESKTFPVAFPDDYQSERLRGVTCLFTIMIKEIAEKRPLPARTEADRATLREEIAARHDEQARRASAKRADLAIRNALLDGCEVDTQKTVESVAWAKFGEESIRDYAYSMILEEIGGREGLATQDDIKRFLREEASI 253
[Close]
BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A7S1MV31_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MV31_HEMAN)

HSP 1 Score: 124 bits (310), Expect = 1.230e-30
Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 2 
Query:  365 GAKKENFELEFKEGHDAPWNTFATNMAVGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDELRTLLRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNADKVLNAVSWAKFGERSTLDFKWNCIKEKIASVEGIE 823
            G K   +ELE K  H  PW+TF  N+AVGMGQ E K F  TFPDD+ +  L GK    +  VK I  +  K  + R + E R    A  E +M+      VD+AI++ L+ +C  +  K   AVSWAKFGE+STLD +W  IKE I   EGI+
Sbjct:    4 GTKANMYELELKGDHKEPWSTFTENIAVGMGQDEMKSFVVTFPDDYAVPALVGKQVRFETYVKKIMNRVAKEADARPEAEQRAEAIAALEASMERSNLDKVDQAIRQELMKTCTADTTKATEAVSWAKFGEKSTLDLQWQIIKEAIGRKEGIK 156
[Close]
BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A4D9DGH6_9STRA (ABC transporter domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGH6_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.510e-17
Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 2 
Query:  122 MAGDVDET--KGVTVDLAEYKGGAITVKVPRMEISDAQVEAALK-ASKKPYKLIPVRFVEEGGTKMGHTVIMNWEAKV------------NGAVVPGAKKENFELEFKEGHDAPWNTFATNMAVGM 454
            M G++  T  KG  V L  YK GA++   P+  +SDA+VEA +K A+KK +KL PVRFVEEGGT+MGHTV+ +W+A               GAV+P A  +NF LE KE    P  +FA  +A GM
Sbjct:   61 MTGEMASTSAKGA-VTLGPYKNGALSFTYPKPTVSDAEVEAQVKTAAKKTFKLTPVRFVEEGGTRMGHTVVCDWKATYVSGGDPAKHSLRPGAVLPRADIKNFVLELKEDQSEPLASFARAVASGM 185
[Close]
BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A1V5HNE3_9BACT (Trigger factor n=1 Tax=Tenericutes bacterium ADurb.BinA124 TaxID=1852921 RepID=A0A1V5HNE3_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 3.880e-10
Identity = 44/137 (32.12%), Postives = 73/137 (53.28%), Query Frame = 2 
Query:  158 VDLAEYKGGAITVKVPRMEISDAQVEAALKASKKPYKLIPVRFVEEGGTKMGHTVIMNWEAKVNGAVVPGAKKENFELEFKEGHDAPWNTFATNMAVGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARK 568
            V L +Y G  + VK    E+ +++VEAA+    +      +  VEEG  ++GHT + ++E +V+G +  G   +N+ LE   G   P   F   M VGM Q E +     FPDD++ E L+GK+A+ +  +  I ++
Sbjct:  118 VVLGKYFG--VEVKKDSTEVEESEVEAAINRDLRSKS--DLELVEEGSLELGHTAVFDFEGRVDGVLFEGGTAKNYSLEIGSGQFIPG--FEEQM-VGMKQEEERDLKVKFPDDYQAENLKGKEAVFKVKLHEIKKR 247
[Close]
BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Match: A0A0R1HSX2_9LACO (Trigger factor n=2 Tax=Dellaglioa algida TaxID=105612 RepID=A0A0R1HSX2_9LACO)

HSP 1 Score: 67.0 bits (162), Expect = 1.300e-8
Identity = 61/201 (30.35%), Postives = 98/201 (48.76%), Query Frame = 2 
Query:  158 VDLAEYKGGAITVKVPRMEISDAQVEAALKASKKPYKLIPVRFVEEGGTKMGHTVIMNWEAKVNGAVVPGAKKENFELEFKEGHDAPWNTFATNMAVGMGQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKE----DKPPETRSDDELRTL--LRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNA--DKVLNAV 736
            V+L +YKG  +TV      ++   VE  L+A ++    + ++  E+     G TVI+++E KV+G    G K EN+ LE       P      +  VG    E      TFP+D++ E LRGK+A+    V  +  KE    D       D+E+ TL  L+AK +  ++   D A  EAI+ A ++    NA  D++ N++
Sbjct:  116 VELGDYKG--LTVPKQSRRVTKKDVEDNLEAKRQQQAELVLK--EDEAAVSGDTVIIDFEGKVDGVAFDGGKSENYTLELGSNSFIPG---FEDQLVGHKAGEDVDVTVTFPEDYQAEDLRGKEAIFAVKVHEVKGKELPEMDDEFAKDVDEEVNTLEELQAKTKDQIKETKDAAAKEAIQDAAIELAVDNAKVDEIPNSM 309
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113.2699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Q9_ECTSI8.910e-14381.82FKBP-type peptidyl-prolyl cis-trans isomerase n=1 ... [more]
A0A4D9CVA6_9STRA7.610e-5144.03Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0VQZ5_9CRYP2.790e-4942.62Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A388KP71_CHABU1.880e-4138.37Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A1Y1I108_KLENI6.320e-3636.33Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7R9Y821_9VIRI1.040e-3535.89Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S1MV31_HEMAN1.230e-3043.79Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A4D9DGH6_9STRA3.510e-1746.03ABC transporter domain-containing protein n=1 Tax=... [more]
A0A1V5HNE3_9BACT3.880e-1032.12Trigger factor n=1 Tax=Tenericutes bacterium ADurb... [more]
A0A0R1HSX2_9LACO1.300e-830.35Trigger factor n=2 Tax=Dellaglioa algida TaxID=105... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113contigM-pyrifera_M_contig113:18177..24149 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score77.4
Seed ortholog evalue1.2e-11
Seed eggNOG ortholog1031288.AXAA01000003_gene1594
Preferred nametig
KEGG koko:K03545
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
EggNOG OGs1TQQ8@1239,248C3@186801,36DYI@31979,COG0544@1,COG0544@2
Ec32 ortholog descriptionSecreted hypothetical protein
Ec32 orthologEc-11_003150.1
COG Functional cat.D
Best tax levelClostridiaceae
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons8
Model size1046
Cds size882
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113.2699.1prot_M-pyrifera_M_contig113.2699.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig113 18337..24145 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.5036097-UTR-M-pyrifera_M_contig113:18176..183361622815643.5036097-UTR-M-pyrifera_M_contig113:18176..18336Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig113 18177..18336 -
1692277501.9419184-UTR-M-pyrifera_M_contig113:18176..183361692277501.9419184-UTR-M-pyrifera_M_contig113:18176..18336Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig113 18177..18336 -
1622815643.605438-UTR-M-pyrifera_M_contig113:24145..241491622815643.605438-UTR-M-pyrifera_M_contig113:24145..24149Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig113 24146..24149 -
1692277502.0336487-UTR-M-pyrifera_M_contig113:24145..241491692277502.0336487-UTR-M-pyrifera_M_contig113:24145..24149Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig113 24146..24149 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.5141184-CDS-M-pyrifera_M_contig113:18336..185011622815643.5141184-CDS-M-pyrifera_M_contig113:18336..18501Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 18337..18501 -
1692277501.9544175-CDS-M-pyrifera_M_contig113:18336..185011692277501.9544175-CDS-M-pyrifera_M_contig113:18336..18501Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 18337..18501 -
1622815643.5256312-CDS-M-pyrifera_M_contig113:18849..189241622815643.5256312-CDS-M-pyrifera_M_contig113:18849..18924Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 18850..18924 -
1692277501.9642184-CDS-M-pyrifera_M_contig113:18849..189241692277501.9642184-CDS-M-pyrifera_M_contig113:18849..18924Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 18850..18924 -
1622815643.538707-CDS-M-pyrifera_M_contig113:19341..194821622815643.538707-CDS-M-pyrifera_M_contig113:19341..19482Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 19342..19482 -
1692277501.9733803-CDS-M-pyrifera_M_contig113:19341..194821692277501.9733803-CDS-M-pyrifera_M_contig113:19341..19482Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 19342..19482 -
1622815643.5499337-CDS-M-pyrifera_M_contig113:20423..205281622815643.5499337-CDS-M-pyrifera_M_contig113:20423..20528Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 20424..20528 -
1692277501.9819136-CDS-M-pyrifera_M_contig113:20423..205281692277501.9819136-CDS-M-pyrifera_M_contig113:20423..20528Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 20424..20528 -
1622815643.5646253-CDS-M-pyrifera_M_contig113:21151..212081622815643.5646253-CDS-M-pyrifera_M_contig113:21151..21208Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 21152..21208 -
1692277501.993271-CDS-M-pyrifera_M_contig113:21151..212081692277501.993271-CDS-M-pyrifera_M_contig113:21151..21208Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 21152..21208 -
1622815643.5742183-CDS-M-pyrifera_M_contig113:22501..226151622815643.5742183-CDS-M-pyrifera_M_contig113:22501..22615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 22502..22615 -
1692277502.0051003-CDS-M-pyrifera_M_contig113:22501..226151692277502.0051003-CDS-M-pyrifera_M_contig113:22501..22615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 22502..22615 -
1622815643.5837295-CDS-M-pyrifera_M_contig113:22979..230691622815643.5837295-CDS-M-pyrifera_M_contig113:22979..23069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 22980..23069 -
1692277502.0147574-CDS-M-pyrifera_M_contig113:22979..230691692277502.0147574-CDS-M-pyrifera_M_contig113:22979..23069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 22980..23069 -
1622815643.5933843-CDS-M-pyrifera_M_contig113:24010..241451622815643.5933843-CDS-M-pyrifera_M_contig113:24010..24145Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 24011..24145 -
1692277502.0245461-CDS-M-pyrifera_M_contig113:24010..241451692277502.0245461-CDS-M-pyrifera_M_contig113:24010..24145Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig113 24011..24145 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig113.2699.1

>prot_M-pyrifera_M_contig113.2699.1 ID=prot_M-pyrifera_M_contig113.2699.1|Name=mRNA_M-pyrifera_M_contig113.2699.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=294bp
MCANSFVLPSRPLISGRTRISTSAFARTSSQPRKQSTRMMAGDVDETKGV
TVDLAEYKGGAITVKVPRMEISDAQVEAALKASKKPYKLIPVRFVEEGGT
KMGHTVIMNWEAKVNGAVVPGAKKENFELEFKEGHDAPWNTFATNMAVGM
GQMETKVFPATFPDDFEIEGLRGKDALVQAVVKSIARKEDKPPETRSDDE
LRTLLRAKGEQTMQNRTDQAVDEAIKKALLDSCDVNADKVLNAVSWAKFG
ERSTLDFKWNCIKEKIASVEGIEPREVSTLLRSEADVVVVDKK*
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mRNA from alignment at M-pyrifera_M_contig113:18177..24149-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig113.2699.1 ID=mRNA_M-pyrifera_M_contig113.2699.1|Name=mRNA_M-pyrifera_M_contig113.2699.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5973bp|location=Sequence derived from alignment at M-pyrifera_M_contig113:18177..24149- (Macrocystis pyrifera P11B4 male)
GTGTATGTGTGCCAACAGCTTCGTGTTGCCCTCCAGACCCCTCATATCAG
GGCGGACGAGAATAAGCACGTCCGCATTTGCGCGAACCTCGTCGCAACCG
CGGAAGCAGTCGACACGAATGATGGCCGGCGACGTTGATGTGAGTCTTAT
CCTGCTCATGAGTGACATTCCAGAGTTGGTTTAATGGTGGATGCCGGTGG
CAAGTAGGCAAACAATGGAATAATCTTGTCCATTGGTGACGTTTGTGTAG
TCACAAATGTCGTAATCCCTCGTCCAGGCGTATACCTGGTACTTGTGCAT
GTTCCCCGACAACTACAGCTGTGCATGCACACGTGTCATCCATGGGGTCA
AAAGCTTGTCGCTGCATTGAATACGGCAGCAGGCAGCAACAACGTCACAT
GTGCGTATTGTGGGTACCGCTCTTAGAACTTCGCCATCGAGTCCTCCCTG
TGCTCGAAAGCTCTTCCTCTTCTCGGTCCCTCTTGCAGCACAAGCGAAAC
GTGTGCGTCTCCGCCAGAATCGTGATCGTACAAGCAGCCTTATGGTTTCA
TCCATTTATCGTGTCCCCCCAAATCTATATTAAAGAGCCATCATATTGTA
TATCGCATGCTCTCGTAGGCTACATATCTTCGTATCGCATGCATGATATG
GTATCGAGGGTCGGTTTAGACTGGCACCCCTGCTGGCAGAGTTTTGATTT
GTAGCTATCTACTTATAATACTGCCGTCCCTGAAAGCGCGAGAGCAAGAG
TTACCAAAGCCGATGACAATCGACGAGCAGGAACCCTGATATAGGCCCGA
TGAAAACGAAGGCGTGTACGGGACAGGAGAAGGGAAGACACCTGTGACAA
CGGCTTGTCCAGAATGTCGCCGAGGGCACAAACCCACGCGAATTAAGCTG
GAATGTAAACGTGAACATATTAAAAAAAAAACGCAACATTTGTCCATGTT
CATGTTGCAGCAGCCAGGCAGCAGCAGCGTCGGATGAAGACGCGTCCTGA
TTGCGTTGCCCTGCCTTGCCTTGCACGCTGCCTTGCTTTTGCCGGGTCTC
TCGTCCAACTTATCCGCGTCGCGTTTCTAGGAGACGAAGGGCGTAACGGT
AGACCTAGCGGAGTACAAGGGAGGAGCCATCACGGTCAAGGTGCCTCGCA
TGGAGATCTCCGACGCGCAGGCGAGAGATCAACCCACCACCTTATTTGAC
TCTTGAGATGTACTGGTACACTGGTACCTGGTAGAAGTTGAGTTGCAGTC
TTCCCAACCGAAGTCATTTCGATTCGACCTGCGATTGGTGACTCAGCGAC
ATAAGAGACCCTCCTTACTGTCCAGCTCTTCTGAGGAGCGGTGATTCCAC
GTCAGGACTACTAAATATATTCATATCAATCAAAACTCGTTTGAATAGAG
CTGAGTCTAGCACTTCGCTCATTTTACTACGGCGTTTGTTCTACTACCGT
ATACCACATACTAAGGATGCTGTTGTTGTTATTGTTATGTTTACTACGTA
CTCCACGCCGGTATTGAATATGCTTTGAGTGCAGGTGGAAGCGGCCTTGA
AGGCTTCGAAGAAGCCTTACAAGCTCATACCCGTAAGGTTTGTGGAGGAA
GGCGGCACAAAGATGGGCCACACCGTCATCATGAACTGGGAGGCCAAGGT
GCGGGGGCATAACCGACACCTTTCGACTTCGGCAAGGACTATTAGGGCTC
TAACGAAAAGTCCTGCACGCTGCGTTTCATCTGCTGAAAATGCGGTAGCT
CGTTAGTCCAGCAGCCATATGAATTGTTAATTGCAGTGGTCGCTTTCTTA
GCCGGAGTGTTGGGCACAGCAGTAGCCCCTTTGTGCTGGAGTGTTGTGTA
CAGCAGCAACATCGTTGCGTTGCAAGTACCGCGTACAGGTGCTGTGCTGC
ATACAGTCGTTTGTGTTGAGGTAGTGCATATCAGTACAGCAGTAGCCGCT
CTTGGTGCTACTGTATTGCGTACCAGCACAGGAGAAAGCCGCTACTGCTG
GGGTAGTGCATATCAGTACGGCAGTAGCTGCTGCTGGGCTAAGACATTGC
GTGCAGCCGCAGTAGCAGCAGCCCATGTGTGCGGAGGTATTGCGTACCAG
CCCAGCAGCACGGCTTATGTGCTGTGGTATTGCGCGAAACAGCAGAACCA
GCAGCCCTTCTGCGAAGGGGTATTGCGTACCAGAATAGCAGTAGCCGCTG
GTGTGCTGGCTTTCTGCGCACCATGACAGCAGTAGCTGCTACGGTACCGG
AGGTTTGCGTGCAGCAGCAGCAGCAGCAGCCGGTATTCCACTTCTGTGTT
GGTGAATGGTGTATTAATACAGCAGTATCCGTTGCTGTGCTGGGGTATTA
CATGCAGCAGCAGTAGCCACTTCTGTGCTGAAGTCCGGCGTATAAGTACA
ACAGTAGCCGCTGCTGTGCTGGGGTGTTGCCTCTCAATGCAGCAGTAGCC
GATGCTGTGGTGGGACAATGCGTGCAGCAGCATCACTCCTTCTGTCTGGG
GGGTTGCGGTTGTGCTGGAGTGTTGCCTATCAATGCAGCAGTAGCCGATG
CTGTGCCGGGGTAGTGCGTGCAGCGGCAGCAGTAGTCCTTCTGTGCTGGG
GTATTGCGTGCTAGTACAGCAGTAGCCGCTACTGTGCCGAGGTATTGCGT
ATCAGTACAGCAGTAGCCGCTACCACTACTGTGCTTGGGTATTGCGTGCA
AGTACAGCAGTAGCTGCTGGTGTTGCGTGCGGGTAAGGCAGTGGCCCCTT
TGTGCTGCGGTGTTGGAAGTACATACCCCACGCCTTTCTCTTCTGACCAC
CGACCATCCACCATGAACGGAGCGCCCGAATCCCGACGGGAAAGGGTTGT
ACGCGAGGCACCCAATCATCCGTAACTAATGTGTATGTTTTGCGAGTATT
TCGAACCTTTTTCGCTCCCTGTCGGTTTTGCTTTTCGGCAGGTCAACGGC
GCAGTCGTACCGGGAGCAAAGAAGGAAAACTTTGAGCTAGAGTTCAAGGT
GGGAATGAGATGAGCTGACAGCAGATTGTGACACGACAGGGGCAATGGTA
GAGCAGCTGTGAGAAAATGTTCAATGCTTGAGGAAACCCTTCTTCAGACA
GTCAGAGTGTAGCGCGACAGAGTGGTGAGGCTTGGTGAAGAAGTGGCCGC
TTTGTCTGGATAACCTGGTCATGTACGGCAGGTACTGACGCGGTTCGGTA
ATAAGGCACCACCTTGTCTGAGAACGCTCCTTATGATATGTCAGTAGCGC
GACAAGGGAGGTGCAACTCGGCAAAGAGCGGCAGCGTTTTTGTGGAAAAA
TCCCACCGTGGTGGGTAACATGTCAAGAGGTAATGCGACTCGGTCTTTCC
ACTTGTACTAAACAGTCGAGGAATACGGCGAGTGTGTTCGACTCGACGAA
AGGGGACCACTTTCCTAGGAGGGAGAAATCCGTATTGCGGATTATTTGTA
AATCGTAAGATGTTGCCCCGGGAAATCCGTCTTTGAGCCGCGTTGCGATC
GAGCATCAGTGACTGGACACCCCATTCATCTGACAGGAACTATCGTAGAC
CCTATCCTGGCCTTACTTCAACTATCTCACCTCGCGTAAACCGCTTATCG
CACCGCGACTGCCGACCGCAGGAGGGGCATGATGCTCCATGGAATACGTT
TGCGACCAATATGGCGGTGGGGATGGGGCAGATGGAGACGAAGGTGTTTC
CGGCAACGTTTCCCGACGACTTCGAGGCAAGTGTGTGAGACTGCTTCGTG
GAGACCCTGCTAAGTATAGAAACCCTCTGCTACATACGACATTAACAATT
CTCAAGCCCCGAGCAAAGCAACCCAGGAGGACCGAGTCCCTCGTGGCTTG
ACGAGTCATGTTATCCTTTGAAAGGTTGTTTGGTATAGAGATGATCGTAA
ACGTAGAGCACATTCTCATCGTGGCTGTGTGTAAGTATGCTGGTGCGTAT
CTACGCCCCGGGAAATCTCGCTTGCACGCTGCTGGCGTGCCCGACTTACT
GTGAGACGGTGGGCTCCGTCGGCAAAAAGCCTTGAAACGCGTGGTCGTAT
GCTGTAGTAAGCGTTGGGGCGGAGTCATCGGAAGGAGGAGGAAGGAAGGT
CGTGCCCTAGTTGGCGAGAAGGGTTTGGTACGTTAAATCAAGACCAAAGG
GCAAATTTTAGCTCTAGACCAAGGTGGTGCTCGCAGGTGCCGTCGAGAGT
TTTCCCAGAAGCTTCTCGTGTTCAAGGAGATGAAGTAGGTGCCGAATATA
TCGTTTGTTGTCTTTTAGGATGAATGTTGCGCCGTAGACCTCGTGGGAAC
CCCCTTCCCCTCCTTCTCGCTGTCGGCATGCATTCGTGTTCGAGTGAGGT
TTTGCTGCACACACGCCCTCGGCGTTGCCTTCCCTCCGCTAGAGCGCCTT
TTTGAGACCCTCCGGTGACTTGTACACGAGCGTATCACTTCGCCTTGCGT
CGCCCTGGTGAGCACCGGGCATGTCCCACCGATTTTCCTGGCCGCGGCGA
GGAAAATTTGTGCGGCTTGACGCGAAGATATATTCAAGTCGATTCATGCG
TCACGAGCAAGGGCAGCAAGCACGGCAGTGTGAGACGCATGGCCTTGTGC
CTCGGGTGGCTTCAACGTCTGACCGGTAAACGCCCCGCCCTTGCTATGCA
CCGCTCGGCTCGAGCAGATAGAAGGTTTGAGGGGCAAGGATGCGTTGGTT
CAGGCGGTAGTAAAGAGCATCGCCAGGAAGGAGGACAAGCCGCCTGAGAC
GCGCAGCGACGATGAGCTCAGGACTCTTCTTCGCGCGAAGGGGGAGCAGA
CAATGCAGGTGAGGTTGTTGGTCGAGGTGTCGTACGAATTCCCAAGACGA
AGGCTACGGATCGAACCGATTCGAAGACGCGCAAACAGCGAAAAACGAAC
AGAAAAACGGATCGATCTCAGAACCGATAGCGGAACCGAAAACTAAAACC
GACCCGAACAACGAAGCGGAGAACAAATCTGGAAACAAACAAAAATAAAA
AAATCACACGTAAGTTCGAACCTAAATCGAACCCCCCTCGTGATTTTGGG
CGCTTCCCATGGGTACGACGACCGTTGACGTCACGAGCGAACCTACAACA
CGCGTTAATCATTAGGGGTGGAGTGGAGGGGATGGACGCTCTCCAACCTT
CCGCCGCGAATTTTTAACTCCGCGATGAAACACGTTGCTCTTCGCGTTAC
TTTGACTGCCCCGTGCCTCATGCAGAACCGAACGGACCAGGCGGTGGACG
AGGCCATCAAGAAGGCCCTCCTTGACTCGTGCGATGTCAACGCTGACAAG
GTGCGCGGTAGACATTTCCGGGGGCATTTCAGGAACGAGGGACGACCGCA
AGGCCCGAGCACTCGAGCCCACCTAGACGAATAGCATAGCCTGACAAAGA
AAAAACACGATTCGAGATTTTCAACAGCAAGCAGACGTGGGGTGCTGTTT
TTCTCTCTGCAATCCGCATGTCCTGGATTTCAGTAGTGTTGCAGTATTGT
TTGATGTCGAGCATGCAACATGACGAGCTATGCTCCCCCCCCCAAAAAAA
AGCATTGCATTACATCGCCCACGGTAAATAATACGCTATCCCCCCCCCCC
CCAACGGCGGCTTCTTCGTCTTCGGCATTGCTTGGTTGACTCGACCAGGT
CTTGAATGCTGTATCGTGGGCAAAGTTTGGGGAGAGGTCGACTCTGGATT
TCAAGTGGAACTGCATCAAGGAAAAGATAGCTTCCGTCGAGGGAATAGAG
CCTCGGGAGGTGTCGACGCTGCTCCGCAGTGAAGCGGACGTCGTCGTCGT
AGACAAAAAGTAGTCGCCCGGGCTGCTGCCGCCGCCGCTACTGCTGCTAC
TGCTGGTGCTGCTACTACTGCTGCTGCTGCGAAACTAAAACAGCTGCATA
TGCCGTAGAGTAGCTCGTACCACGGGCAGGTTTTCGCCCCGCGCACGCTG
TGCTCGGCTGCGCATCGCTTCGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig113:18177..24149-

>mRNA_M-pyrifera_M_contig113.2699.1 ID=mRNA_M-pyrifera_M_contig113.2699.1|Name=mRNA_M-pyrifera_M_contig113.2699.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1764bp|location=Sequence derived from alignment at M-pyrifera_M_contig113:18177..24149- (Macrocystis pyrifera P11B4 male)
ATGTGTGCCAACAGCTTCGTGTTGCCCTCCAGACCCCTCATATCAGGGCG
GACGAGAATAAGCACGTCCGCATTTGCGCGAACCTCGTCGCAACCGCGGA
AGCAGTCGACACGAATGATGGCCGGCGACGTTGATATGTGTGCCAACAGC
TTCGTGTTGCCCTCCAGACCCCTCATATCAGGGCGGACGAGAATAAGCAC
GTCCGCATTTGCGCGAACCTCGTCGCAACCGCGGAAGCAGTCGACACGAA
TGATGGCCGGCGACGTTGATGAGACGAAGGGCGTAACGGTAGACCTAGCG
GAGTACAAGGGAGGAGCCATCACGGTCAAGGTGCCTCGCATGGAGATCTC
CGACGCGCAGGAGACGAAGGGCGTAACGGTAGACCTAGCGGAGTACAAGG
GAGGAGCCATCACGGTCAAGGTGCCTCGCATGGAGATCTCCGACGCGCAG
GTGGAAGCGGCCTTGAAGGCTTCGAAGAAGCCTTACAAGCTCATACCCGT
AAGGTTTGTGGAGGAAGGCGGCACAAAGATGGGCCACACCGTCATCATGA
ACTGGGAGGCCAAGGTGGAAGCGGCCTTGAAGGCTTCGAAGAAGCCTTAC
AAGCTCATACCCGTAAGGTTTGTGGAGGAAGGCGGCACAAAGATGGGCCA
CACCGTCATCATGAACTGGGAGGCCAAGGTCAACGGCGCAGTCGTACCGG
GAGCAAAGAAGGAAAACTTTGAGCTAGAGTTCAAGGTCAACGGCGCAGTC
GTACCGGGAGCAAAGAAGGAAAACTTTGAGCTAGAGTTCAAGGAGGGGCA
TGATGCTCCATGGAATACGTTTGCGACCAATATGGCGGTGGGGATGGGGC
AGATGGAGACGAAGGTGTTTCCGGCAACGTTTCCCGACGACTTCGAGGAG
GGGCATGATGCTCCATGGAATACGTTTGCGACCAATATGGCGGTGGGGAT
GGGGCAGATGGAGACGAAGGTGTTTCCGGCAACGTTTCCCGACGACTTCG
AGATAGAAGGTTTGAGGGGCAAGGATGCGTTGGTTCAGGCGGTAGTAAAG
AGCATCGCCAGGAAGGAGGACAAGCCGCCTGAGACGCGCAGCGACGATGA
GCTCAGGACTCTTCTTCGCGCGAAGGGGGAGCAGACAATGCAGATAGAAG
GTTTGAGGGGCAAGGATGCGTTGGTTCAGGCGGTAGTAAAGAGCATCGCC
AGGAAGGAGGACAAGCCGCCTGAGACGCGCAGCGACGATGAGCTCAGGAC
TCTTCTTCGCGCGAAGGGGGAGCAGACAATGCAGAACCGAACGGACCAGG
CGGTGGACGAGGCCATCAAGAAGGCCCTCCTTGACTCGTGCGATGTCAAC
GCTGACAAGAACCGAACGGACCAGGCGGTGGACGAGGCCATCAAGAAGGC
CCTCCTTGACTCGTGCGATGTCAACGCTGACAAGGTCTTGAATGCTGTAT
CGTGGGCAAAGTTTGGGGAGAGGTCGACTCTGGATTTCAAGTGGAACTGC
ATCAAGGAAAAGATAGCTTCCGTCGAGGGAATAGAGCCTCGGGAGGTGTC
GACGCTGCTCCGCAGTGAAGCGGACGTCGTCGTCGTAGACAAAAAGTAGG
TCTTGAATGCTGTATCGTGGGCAAAGTTTGGGGAGAGGTCGACTCTGGAT
TTCAAGTGGAACTGCATCAAGGAAAAGATAGCTTCCGTCGAGGGAATAGA
GCCTCGGGAGGTGTCGACGCTGCTCCGCAGTGAAGCGGACGTCGTCGTCG
TAGACAAAAAGTAG
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