prot_M-pyrifera_M_contig112958.2696.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112958.2696.1
Unique Nameprot_M-pyrifera_M_contig112958.2696.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length136
Homology
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A358A1H5_9ACTN (Transport permease protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A1H5_9ACTN)

HSP 1 Score: 180 bits (457), Expect = 2.370e-54
Identity = 87/131 (66.41%), Postives = 101/131 (77.10%), Query Frame = 0
Query:    5 ANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRDGVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEEP 135
            ANISWT +FL  +L+  M F LG+GFIV+V NARYRD QYLIG+L+ V FFLVPIVY P LLDRD VP++ R LV WNPPALFVEIARD  YFL+ P    LL +AAWA+ TF +GW YFR +SM ISEEP
Sbjct:  140 ANISWTAVFLVFSLLLTMAFALGIGFIVAVLNARYRDIQYLIGVLIGVGFFLVPIVYPPSLLDRDDVPEIGRQLVTWNPPALFVEIARDGVYFLQTPDPLKLLVAAAWAVGTFTVGWFYFRARSMEISEEP 270          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A6B1AWC8_9ACTN (Transport permease protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWC8_9ACTN)

HSP 1 Score: 172 bits (435), Expect = 6.790e-51
Identity = 81/132 (61.36%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    4 LANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRDGVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEEP 135
            L+NISWT++FL VA+           FIVSV NARYRD +YL GILLNV+FF VPIVYTP+LL ++ +P++AR+ V+WNP ALF+EI+RDA YFL+VP WN  LA+  W++ TF IGWV+FR QSM+ISEEP
Sbjct:  150 LSNISWTLVFLPVAMXXXXXXXXXXXFIVSVLNARYRDVKYLSGILLNVAFFAVPIVYTPELLKKEQIPEIARLFVEWNPVALFIEISRDAAYFLQVPLWNRFLAAVVWSVTTFVIGWVFFRRQSMSISEEP 281          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A2D6UAL4_9ACTN (Transport permease protein n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UAL4_9ACTN)

HSP 1 Score: 171 bits (433), Expect = 1.000e-50
Identity = 80/129 (62.02%), Postives = 100/129 (77.52%), Query Frame = 0
Query:    6 NISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRDGVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEE 134
            NISWT +FL  AL+  MMF LG+GFIV+V N+RYRD QYL G+L+ V FFLVP+VY P LL+ + VP++AR LV WNPPA+FVEIARD  YFL+ P    +L + AWA+ TFA+GW+YFR +SM ISEE
Sbjct:  141 NISWTALFLVFALLLTMMFALGIGFIVAVLNSRYRDIQYLTGVLIGVGFFLVPVVYPPSLLEHNDVPEIARQLVTWNPPAIFVEIARDGVYFLQTPDPLXVLVATAWAVGTFAVGWLYFRSRSMEISEE 269          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A2E0SYM4_9ACTN (ABC2_membrane domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0SYM4_9ACTN)

HSP 1 Score: 164 bits (416), Expect = 2.630e-45
Identity = 78/129 (60.47%), Postives = 96/129 (74.42%), Query Frame = 0
Query:    6 NISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRDGVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEE 134
            NISWT +F   AL+  MMF LG+GFIV+V N+RYRD QYL G+L+ V FFLVP+VY P LL+ + VP +AR LV WNPPA+FVE ARD  YFL+ P    +L + AWA+ TFA GW+YFR +SM ISEE
Sbjct:  474 NISWTALFXVFALLLTMMFALGIGFIVAVLNSRYRDIQYLTGVLIGVGFFLVPVVYPPSLLEXNDVPXIARQLVTWNPPAIFVEXARDGVYFLQTPDPLRVLVATAWAVGTFAXGWLYFRSRSMEISEE 602          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A3M2GIJ2_ACTSX (Transport permease protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GIJ2_ACTSX)

HSP 1 Score: 138 bits (348), Expect = 6.700e-38
Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 0
Query:    1 MIVLANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRD--GVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEEP 135
            M+ L N+SWTV+FL +ALV V +F LG+GF+V++ NARYRD QYL GI LNV FF VPIV+TP ++     G+P + RI ++ NP   FV  ARDA YFLEVP    ++A  AW++ +F  GW YFR +SM ISEEP
Sbjct:  139 MVALLNVSWTVVFLPLALVSVAVFALGIGFVVAILNARYRDVQYLTGIALNVWFFSVPIVFTPAIVPERAYGLP-VGRI-IELNPLTQFVGFARDAVYFLEVPSLGRIVAVVAWSVASFVPGWWYFRRKSMEISEEP 273          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A6B1EE92_9ACTN (Transport permease protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EE92_9ACTN)

HSP 1 Score: 137 bits (344), Expect = 3.650e-37
Identity = 79/137 (57.66%), Postives = 101/137 (73.72%), Query Frame = 0
Query:    1 MIVLANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLL-DRD-GVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEEP 135
            M VLAN+SWT++FL VA++   MF LG+GF  ++ NARYRD Q+L  I+L+V FF+VPIVYTPD++ DR  G+P +ARI V+ NP    + +ARDA YFLE P    L  +AAWAI TFAIG  +FR +SMAISEEP
Sbjct:  152 MTVLANVSWTLVFLPVAMLLAAMFALGLGFAAAIVNARYRDIQHLTTIVLSVGFFMVPIVYTPDIVPDRAYGLP-VARI-VELNPLNSVIAVARDAVYFLETPDLADLATAAAWAIGTFAIGLAFFRRRSMAISEEP 286          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A800LQ96_9ACTN (Transport permease protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800LQ96_9ACTN)

HSP 1 Score: 115 bits (288), Expect = 7.690e-29
Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 0
Query:    6 NISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRDGVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEE 134
            N+ WT++ L V L+F  MFGLG+G ++SVFN RYRD + LI ILL+  FFLVPIVYT D++  +     A  L+  NP + FV  ARD  YFLE P    +   A +A  +  +GW +   +SMA+SEE
Sbjct:  155 NLGWTIVLLPVVLLFTAMFGLGIGMVMSVFNTRYRDVENLIVILLSTMFFLVPIVYTEDIIPEEAYGLPAAALIGANPISQFVGTARDVVYFLEWPSLARMSLLAVYAFGSLGVGWWFLNRRSMALSEE 283          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A2E1WMJ6_9ACTN (Transport permease protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E1WMJ6_9ACTN)

HSP 1 Score: 110 bits (275), Expect = 5.290e-27
Identity = 60/136 (44.12%), Postives = 85/136 (62.50%), Query Frame = 0
Query:    1 MIVLANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRD--GVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEE 134
            M++L N+    + L + L    +FGLGVGF V V N  YRD QYL+GI++N  FFLVPIVY  D++ +   G+P   R +V+WNP   FV  ARD+ Y +E P  +  LA   ++  TFA+GW +F  +SM +SE+
Sbjct:  140 MVLLGNVGLPTLLLPIVLALAGLFGLGVGFFVCVLNTHYRDVQYLVGIVINAVFFLVPIVYPIDIIPQHHWGLP--IRKIVEWNPINQFVAAARDSAYLVEWPSASRWLALVIYSTATFALGWRFFARRSMRLSED 273          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A1Z9JQP1_9ACTN (Transport permease protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A1Z9JQP1_9ACTN)

HSP 1 Score: 108 bits (269), Expect = 4.700e-26
Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    1 MIVLANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRD--GVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEE 134
            MI++AN+  T + L + LV   +FGLG+GF V V N  YRD QYL+GI+LN  FFLVPIVY   ++     G+P   R ++++NP   FV  AR++ Y LE   WN       +++ +F +GW +F  +SM +SE+
Sbjct:  147 MILIANVGLTTLVLPIILVLAGLFGLGIGFFVCVLNTHYRDVQYLVGIILNALFFLVPIVYPISIIPEAHWGIP--IRKMIEYNPVNQFVAAARESAYLLEWSSWNRWALIIFYSVASFTLGWRFFNKRSMQLSED 280          
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Match: A0A7C7XQR1_9ACTN (Transport permease protein n=6 Tax=root TaxID=1 RepID=A0A7C7XQR1_9ACTN)

HSP 1 Score: 107 bits (266), Expect = 2.000e-25
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 0
Query:    4 LANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILLNVSFFLVPIVYTPDLLDRD--GVPDLARILVKWNPPALFVEIARDATYFLEVPQWNHLLASAAWAIITFAIGWVYFRDQSMAISEE 134
            L N+    + L V L+   +FGLG+GF V V N  YRD QYL+GI++N  FFLVPIVY  D++     G+P   R +V+WNP   FV  ARD+ Y +E P     LA   ++ + F +GW +F  +SM +SE+
Sbjct:  173 LGNVGLPTLVLPVVLLLAGLFGLGIGFFVCVLNTHYRDVQYLVGIIINAVFFLVPIVYPIDIIPERHWGLP--VRKIVEWNPINQFVAAARDSAYLVEWPSATRWLALVGYSTVAFGLGWRFFARRSMQLSED 303          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112958.2696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A358A1H5_9ACTN2.370e-5466.41Transport permease protein n=1 Tax=Acidimicrobiace... [more]
A0A6B1AWC8_9ACTN6.790e-5161.36Transport permease protein n=1 Tax=Acidimicrobiace... [more]
A0A2D6UAL4_9ACTN1.000e-5062.02Transport permease protein n=4 Tax=Acidimicrobiace... [more]
A0A2E0SYM4_9ACTN2.630e-4560.47ABC2_membrane domain-containing protein n=1 Tax=Ac... [more]
A0A3M2GIJ2_ACTSX6.700e-3854.74Transport permease protein n=1 Tax=Actinomyces sp.... [more]
A0A6B1EE92_9ACTN3.650e-3757.66Transport permease protein n=2 Tax=Acidimicrobiace... [more]
A0A800LQ96_9ACTN7.690e-2946.51Transport permease protein n=1 Tax=Acidimicrobiia ... [more]
A0A2E1WMJ6_9ACTN5.290e-2744.12Transport permease protein n=1 Tax=Acidimicrobiace... [more]
A0A1Z9JQP1_9ACTN4.700e-2641.91Transport permease protein n=3 Tax=Actinobacteria ... [more]
A0A7C7XQR1_9ACTN2.000e-2542.86Transport permease protein n=6 Tax=root TaxID=1 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 3..94
e-value: 3.7E-8
score: 33.0
NoneNo IPR availablePANTHERPTHR30413INNER MEMBRANE TRANSPORT PERMEASEcoord: 5..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..32
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 102..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112958contigM-pyrifera_M_contig112958:162..569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112958.2696.1mRNA_M-pyrifera_M_contig112958.2696.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112958 162..581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112958.2696.1 ID=prot_M-pyrifera_M_contig112958.2696.1|Name=mRNA_M-pyrifera_M_contig112958.2696.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp
MIVLANISWTVIFLFVALVFVMMFGLGVGFIVSVFNARYRDTQYLIGILL
NVSFFLVPIVYTPDLLDRDGVPDLARILVKWNPPALFVEIARDATYFLEV
PQWNHLLASAAWAIITFAIGWVYFRDQSMAISEEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans