prot_M-pyrifera_M_contig112951.2694.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112951.2694.1
Unique Nameprot_M-pyrifera_M_contig112951.2694.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length46
Homology
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A7S3DN11_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DN11_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 7.150e-11
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLACLL 35
            ++FDHFCPWV NAVGA NHKFF LF+ Y  + CLL
Sbjct:   60 VKFDHFCPWVGNAVGALNHKFFCLFLLYTAITCLL 94          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A7S1Y5B7_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y5B7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 8.450e-11
Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLACLL 35
            ++ DHFCPWV NAVGA NHKFFVLF+ Y  L+CLL
Sbjct:  152 VKMDHFCPWVCNAVGALNHKFFVLFIFYTLLSCLL 186          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A7S2Y8H8_9STRA (Palmitoyltransferase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y8H8_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.620e-9
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLACLLVTIASIEAATH 46
            ++FDHFCPWV NAVGA NHKFF LF+ Y  + C+L  +  +  A H
Sbjct:   60 VKFDHFCPWVGNAVGALNHKFFCLFLLYTAITCVLSMLLLLLRALH 105          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A6B2LFU5_9EUKA (Palmitoyltransferase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LFU5_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 2.100e-9
Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLA 32
            LR+DHFCPW+ANAVG +NHK+F+L + YA +A
Sbjct:   70 LRYDHFCPWIANAVGLQNHKYFILLIIYAMIA 101          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A7S1B7Z3_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7Z3_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.420e-9
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTY---AFLACLLV 36
            ++FDH+CPW+ NAVG RNHKFFVLFV Y   A + CLLV
Sbjct:  196 VKFDHYCPWINNAVGVRNHKFFVLFVAYVATAAVGCLLV 234          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A7J7ID45_9RHOD (Palmitoyltransferase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ID45_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 6.110e-9
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLACLLVTIASIEAATH 46
            L+ DH+CPW  N +G  NHKFFV F+ YAFLA L+  + S+ A  H
Sbjct:  188 LKMDHYCPWTNNTIGFYNHKFFVQFLYYAFLASLITAVISLPAILH 233          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: M1VAM4_CYAM1 (Palmitoyltransferase n=2 Tax=cellular organisms TaxID=131567 RepID=M1VAM4_CYAM1)

HSP 1 Score: 58.5 bits (140), Expect = 8.370e-9
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLACLLVTIASIEA 43
            L+ DHFCPW  N VG  NHKFFV F+ Y F+ACL+  + S  A
Sbjct:  188 LKMDHFCPWTNNTVGFYNHKFFVQFLYYGFMACLVTAVLSFPA 230          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: M2X872_GALSU (Palmitoyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X872_GALSU)

HSP 1 Score: 58.2 bits (139), Expect = 1.080e-8
Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLACLLVTIASI 41
            L+ DH CPW+ N VG  N KFF+LFV YAFL CL V++  +
Sbjct:  147 LKMDHHCPWINNCVGFYNQKFFILFVYYAFLGCLFVSVTGV 187          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A7S2W6V2_9STRA (Palmitoyltransferase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6V2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.120e-8
Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLAC 33
            L+ DHFCPWV NAVG  NHKFF+LFV Y  L+C
Sbjct:  131 LKMDHFCPWVNNAVGLFNHKFFLLFVLYTMLSC 163          
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Match: A0A7S0CKC9_9STRA (Palmitoyltransferase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CKC9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 2.870e-8
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    1 LRFDHFCPWVANAVGARNHKFFVLFVTYAFLA 32
            ++ DHFCPWV NA+GA NHK FVLF+ Y FL+
Sbjct:   37 VKMDHFCPWVCNAIGAMNHKHFVLFILYTFLS 68          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112951.2694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3DN11_9STRA7.150e-1168.57Palmitoyltransferase (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S1Y5B7_9STRA8.450e-1171.43Palmitoyltransferase (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2Y8H8_9STRA1.620e-954.35Palmitoyltransferase n=1 Tax=Amphiprora paludosa T... [more]
A0A6B2LFU5_9EUKA2.100e-965.63Palmitoyltransferase n=1 Tax=Arcella intermedia Ta... [more]
A0A7S1B7Z3_9STRA2.420e-966.67Palmitoyltransferase (Fragment) n=1 Tax=Corethron ... [more]
A0A7J7ID45_9RHOD6.110e-952.17Palmitoyltransferase n=1 Tax=Cyanidiococcus yangmi... [more]
M1VAM4_CYAM18.370e-955.81Palmitoyltransferase n=2 Tax=cellular organisms Ta... [more]
M2X872_GALSU1.080e-856.10Palmitoyltransferase n=1 Tax=Galdieria sulphuraria... [more]
A0A7S2W6V2_9STRA1.120e-869.70Palmitoyltransferase n=2 Tax=Rhizochromulina marin... [more]
A0A7S0CKC9_9STRA2.870e-865.63Palmitoyltransferase n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 1..44
e-value: 5.0E-15
score: 55.8
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 1..39
NoneNo IPR availablePANTHERPTHR22883:SF147PALMITOYLTRANSFERASEcoord: 1..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..46
NoneNo IPR availablePROSITEPS50216DHHCcoord: 1..27
score: 14.428
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112951contigM-pyrifera_M_contig112951:443..580 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112951.2694.1mRNA_M-pyrifera_M_contig112951.2694.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112951 443..580 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112951.2694.1 ID=prot_M-pyrifera_M_contig112951.2694.1|Name=mRNA_M-pyrifera_M_contig112951.2694.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=46bp
LRFDHFCPWVANAVGARNHKFFVLFVTYAFLACLLVTIASIEAATH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC