mRNA_M-pyrifera_M_contig101258.269.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101258.269.1
Unique NamemRNA_M-pyrifera_M_contig101258.269.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A1Y1Y4X4_9FUNG (Post-GPI attachment to proteins factor 3 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y4X4_9FUNG)

HSP 1 Score: 140 bits (354), Expect = 2.490e-38
Identity = 68/136 (50.00%), Postives = 94/136 (69.12%), Query Frame = 1
Query:   13 PLFLRSLLWSCEENCKYVVMWEREVVRRG-EGLEP-VQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            PL LR  LWSC +NCKY  M  R++  +  E  EP VQYYGKWPF+R+FG+QEP SVLFS+ N + H WY W+ +    P  Y+L P    +A+ G+NAW+ S++FHTRDTP+T+++DY +A L +L    V+V+R
Sbjct:   52 PLSLRLTLWSCVDNCKYDCM--RQITEKATETGEPIVQYYGKWPFLRLFGMQEPASVLFSVLNGWGH-WYHWKVIKTRIPNTYFLKPFYYGYAIVGMNAWLWSSVFHTRDTPLTEKLDYFSAALTILYGLFVAVLR 184          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A1Y1XT47_9FUNG (Post-GPI attachment to proteins factor 3 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XT47_9FUNG)

HSP 1 Score: 138 bits (347), Expect = 2.510e-37
Identity = 63/134 (47.01%), Postives = 88/134 (65.67%), Query Frame = 1
Query:   13 PLFLRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            PL LR   WSC +NCKY  M +        G E VQYYGKWPF+R+FG+QEP SVLFS+ N + H W+ WR +    P +Y+L P    +AL G+NAW+ S+IFH+RD  VT+++DY +A L +L    ++++R
Sbjct:   48 PLILRITRWSCLDNCKYNCMRQATEAAVERGEEIVQYYGKWPFIRLFGLQEPASVLFSVLNGWAH-WHHWRRIQTRVPDQYFLKPFYFGYALLGMNAWLCSSIFHSRDNSVTEKLDYFSAALTILYGLYMAILR 180          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A1Y1XTK7_9FUNG (Post-GPI attachment to proteins factor 3 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XTK7_9FUNG)

HSP 1 Score: 134 bits (338), Expect = 5.880e-36
Identity = 63/134 (47.01%), Postives = 83/134 (61.94%), Query Frame = 1
Query:   13 PLFLRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            PL LR   WSCE NCKY  M E     R  G   VQYYGKWPFVR  G+QEP SV FS+ N + H W  W+ +    P+ Y+L     +F + G+N W+ SA+FHTRDTPVT++ DY +A L ++    V+++R
Sbjct:   51 PLSLRLTFWSCESNCKYTCMREITQRTREAGQPVVQYYGKWPFVRFLGMQEPASVAFSILNGWAH-WRHWKVIKSEVPEGYFLKRFYYMFVVVGVNTWLWSAVFHTRDTPVTEKFDYFSAALTVMYGLYVALLR 183          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A068RJS8_9FUNG (Post-GPI attachment to proteins factor 3 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RJS8_9FUNG)

HSP 1 Score: 134 bits (338), Expect = 6.150e-36
Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 1
Query:   13 PLFLRSLLWSCEENCKYVVMWEREVVRRG--EGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            PL LR   WSC ENC+Y  M  +++  R   +G    QYYGKWPF R+ G+QEP SVLFS+GN + H +Y ++ L    P  Y++ P +++FAL GINAW+ S +FH+RD PVT+++DY +A L LL     ++IR
Sbjct:   48 PLALRLTFWSCNENCRYECM--QQITDRAIQDGTPVYQYYGKWPFYRLLGIQEPASVLFSIGNGYVH-YYYYKILRREIPNGYFMKPFMLVFALVGINAWVWSTVFHSRDFPVTEKLDYFSAGLFLLYSLYYALIR 180          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A8H7SCW3_9FUNG (Post-GPI attachment to proteins factor 3 n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SCW3_9FUNG)

HSP 1 Score: 133 bits (334), Expect = 2.470e-35
Identity = 65/139 (46.76%), Postives = 90/139 (64.75%), Query Frame = 1
Query:   13 PLFLRSLLWSCEENCKYVVMWEREVVRRG--EGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWY---MWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            PL LR  LW C ENC+Y  M  +++  R   E     QYYGKWPF R++G+QEP SVLFS+GN + H +Y   + RD+    P  YYL P +++F+L GINAW+ S +FH+RD P+T+++DY +A L +L      VIR
Sbjct:   50 PLSLRLTLWDCPENCQYTCM--QKITDRALIENTPVYQYYGKWPFYRLWGIQEPASVLFSIGNGYVHYYYFGILRRDI----PNAYYLKPFMLMFSLVGINAWIWSTVFHSRDFPLTEKLDYFSAGLFILYSLYYGVIR 182          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: S2JL11_MUCC1 (Post-GPI attachment to proteins factor 3 n=4 Tax=Mucor TaxID=4830 RepID=S2JL11_MUCC1)

HSP 1 Score: 129 bits (325), Expect = 5.590e-34
Identity = 64/140 (45.71%), Postives = 87/140 (62.14%), Query Frame = 1
Query:    1 SSPPPLF--LRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            S P PL   LR L WSC E+C+YV M         EGL   QYYGKWPF R FG+QEP SV+FS+GN   HA+Y +R +    P  Y+L   ++L+   G+NAW+ S IFH+RDT  T+ +DY +A L++L     +++R
Sbjct:   40 SCPAPLSFSLRLLKWSCPEDCRYVCMQAVTDKAIEEGLPVYQYYGKWPFYRCFGIQEPASVIFSIGNGLVHAFY-FRQIQKQVPSGYFLKGFMLLYTTIGVNAWLWSTIFHSRDTKFTELMDYLSAGLLVLYSLYYAILR 178          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A8H7R6I3_9FUNG (Post-GPI attachment to proteins factor 3 n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7R6I3_9FUNG)

HSP 1 Score: 129 bits (325), Expect = 5.590e-34
Identity = 62/140 (44.29%), Postives = 85/140 (60.71%), Query Frame = 1
Query:    1 SSPPPLF--LRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            S P PL   LR   WSC ENC+Y+ M         EGL   QYYGKWPF R  G+QEP SVLFS+GN   HA+Y +R +    P  Y+    ++L+ + G+NAW+ S IFH+RDT  T+ +DY +A L++L     +++R
Sbjct:   40 SCPAPLSYSLRLFKWSCSENCRYICMQAATDKAIEEGLPVYQYYGKWPFYRCLGIQEPASVLFSIGNGLVHAYY-FRQIQKQVPSNYFFKGFMLLYTVIGMNAWLWSTIFHSRDTKFTELMDYFSAGLLVLYSLYYAILR 178          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A077WC63_9FUNG (Post-GPI attachment to proteins factor 3 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A077WC63_9FUNG)

HSP 1 Score: 127 bits (319), Expect = 7.680e-33
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 1
Query:    1 SSPPPLFLRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR 414
            SS  PL+LR+  WSC +NC Y  M E            VQ+YGKWPF R+FG+QEP SV FS+GN   H +Y+ R   +  P  +Y+ P +IL+A   IN W+ S+IFH+RD PVT+R+DY  A L ++     ++IR
Sbjct:   52 SSSLPLYLRAFFWSCPDNCGYNCMHEYTDTHS----PMVQFYGKWPFYRLFGIQEPASVAFSIGNGLVHFYYL-RVALLEIPPTWYMQPFVILYAAININTWIQSSIFHSRDLPVTERLDYFGAALTIMYSLYYAIIR 184          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A4P9XPM3_9FUNG (Post-GPI attachment to proteins factor 3 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XPM3_9FUNG)

HSP 1 Score: 127 bits (319), Expect = 8.750e-33
Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 1
Query:    4 SPPPLFLRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAP---KEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAA 372
            +P PL++R L W+C ++C+Y         R   G   VQY+GKWPF R+ GVQEP SVLFSL N + H    WR L VLA    K Y++  VL+ +A  G+N W+ SA+FH RDTP+T+++DY +A
Sbjct:   73 NPLPLYMRLLHWTCPDDCRYQCQHSVTAARLERGEPVVQYHGKWPFTRILGVQEPASVLFSLWNGYGH----WRYLPVLAGSVNKRYFMRTVLLGYAFVGLNTWLWSAVFHVRDTPLTEKLDYFSA 194          
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Match: A0A1X2I6B4_9FUNG (Post-GPI attachment to proteins factor 3 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I6B4_9FUNG)

HSP 1 Score: 125 bits (315), Expect = 1.730e-32
Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 1
Query:   13 PLFLRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRVFGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGINAWMGSAIFHTRDTPVTQRIDYHAAQLVLL 387
            PL LR L WSC ENC+Y  M            E +QYYGKWPF R  G+QEP SVLFS+GN   H  Y +  L    P  YYL   ++++AL G+NAW+ S +FH RDT VT+++DY +A L++L
Sbjct:   46 PLSLRLLFWSCRENCQYNCMQAITDKAIEHADEVMQYYGKWPFYRWLGIQEPASVLFSIGNGLVHHHY-YHVLKQRIPNNYYLKRAMLVYALLGMNAWVWSTVFHARDTSVTEKLDYFSAGLLIL 169          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101258.269.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1Y4X4_9FUNG2.490e-3850.00Post-GPI attachment to proteins factor 3 n=1 Tax=B... [more]
A0A1Y1XT47_9FUNG2.510e-3747.01Post-GPI attachment to proteins factor 3 n=1 Tax=B... [more]
A0A1Y1XTK7_9FUNG5.880e-3647.01Post-GPI attachment to proteins factor 3 n=1 Tax=B... [more]
A0A068RJS8_9FUNG6.150e-3647.06Post-GPI attachment to proteins factor 3 n=2 Tax=L... [more]
A0A8H7SCW3_9FUNG2.470e-3546.76Post-GPI attachment to proteins factor 3 n=1 Tax=M... [more]
S2JL11_MUCC15.590e-3445.71Post-GPI attachment to proteins factor 3 n=4 Tax=M... [more]
A0A8H7R6I3_9FUNG5.590e-3444.29Post-GPI attachment to proteins factor 3 n=1 Tax=M... [more]
A0A077WC63_9FUNG7.680e-3344.93Post-GPI attachment to proteins factor 3 n=2 Tax=L... [more]
A0A4P9XPM3_9FUNG8.750e-3346.83Post-GPI attachment to proteins factor 3 n=1 Tax=T... [more]
A0A1X2I6B4_9FUNG1.730e-3248.00Post-GPI attachment to proteins factor 3 n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101258contigM-pyrifera_M_contig101258:1..414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score129.0
Seed ortholog evalue1.7e-27
Seed eggNOG ortholog36080.S2JL11
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0019538,GO:0019637,GO:0019725,GO:0030003,GO:0030026,GO:0031090,GO:0031224,GO:0031984,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0046916,GO:0048878,GO:0050801,GO:0055065,GO:0055071,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0090407,GO:0098588,GO:0098771,GO:0098805,GO:0098827,GO:0098852,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509
EggNOG free text desc.Mn2 homeostasis protein
EggNOG OGs39RGE@33154,3NWWT@4751,COG5237@1,KOG2970@2759
COG Functional cat.S
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons1
Model size414
Cds size414
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815510.3186514-CDS-M-pyrifera_M_contig101258:0..4141622815510.3186514-CDS-M-pyrifera_M_contig101258:0..414Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101258 1..414 -
1692277444.0356169-CDS-M-pyrifera_M_contig101258:0..4141692277444.0356169-CDS-M-pyrifera_M_contig101258:0..414Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101258 1..414 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101258.269.1prot_M-pyrifera_M_contig101258.269.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101258 1..414 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101258.269.1

>prot_M-pyrifera_M_contig101258.269.1 ID=prot_M-pyrifera_M_contig101258.269.1|Name=mRNA_M-pyrifera_M_contig101258.269.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
SSPPPLFLRSLLWSCEENCKYVVMWEREVVRRGEGLEPVQYYGKWPFVRV
FGVQEPLSVLFSLGNAFPHAWYMWRDLDVLAPKEYYLSPVLILFALCGIN
AWMGSAIFHTRDTPVTQRIDYHAAQLVLLAQAVVSVIR
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mRNA from alignment at M-pyrifera_M_contig101258:1..414-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101258.269.1 ID=mRNA_M-pyrifera_M_contig101258.269.1|Name=mRNA_M-pyrifera_M_contig101258.269.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig101258:1..414- (Macrocystis pyrifera P11B4 male)
TCTTCTCCTCCCCCTCTTTTCCTGCGCAGCTTGCTTTGGAGTTGCGAGGA GAACTGCAAGTACGTCGTGATGTGGGAGCGTGAGGTTGTGCGCCGCGGGG AGGGGTTGGAGCCGGTGCAGTATTATGGGAAGTGGCCTTTCGTGCGTGTG TTTGGGGTGCAGGAGCCTCTGAGCGTCTTGTTTTCCCTGGGCAATGCGTT TCCGCACGCGTGGTACATGTGGCGGGACTTGGACGTGTTGGCCCCAAAAG AATACTACCTGAGCCCCGTTCTGATCCTCTTTGCGCTGTGTGGCATCAAC GCTTGGATGGGCTCTGCCATCTTCCACACTCGAGACACGCCAGTGACACA ACGCATTGACTACCATGCTGCCCAGCTGGTGCTGCTGGCGCAGGCCGTGG TGAGCGTGATCCGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101258:1..414-

>mRNA_M-pyrifera_M_contig101258.269.1 ID=mRNA_M-pyrifera_M_contig101258.269.1|Name=mRNA_M-pyrifera_M_contig101258.269.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig101258:1..414- (Macrocystis pyrifera P11B4 male)
TCTTCTCCTCCCCCTCTTTTCCTGCGCAGCTTGCTTTGGAGTTGCGAGGA
GAACTGCAAGTACGTCGTGATGTGGGAGCGTGAGGTTGTGCGCCGCGGGG
AGGGGTTGGAGCCGGTGCAGTATTATGGGAAGTGGCCTTTCGTGCGTGTG
TTTGGGGTGCAGGAGCCTCTGAGCGTCTTGTTTTCCCTGGGCAATGCGTT
TCCGCACGCGTGGTACATGTGGCGGGACTTGGACGTGTTGGCCCCAAAAG
AATACTACCTGAGCCCCGTTCTGATCCTCTTTGCGCTGTGTGGCATCAAC
GCTTGGATGGGCTCTGCCATCTTCCACACTCGAGACACGCCAGTGACACA
ACGCATTGACTACCATGCTGCCCAGCTGGTGCTGCTGGCGCAGGCCGTGG
TGAGCGTGATCCGGTCTTCTCCTCCCCCTCTTTTCCTGCGCAGCTTGCTT
TGGAGTTGCGAGGAGAACTGCAAGTACGTCGTGATGTGGGAGCGTGAGGT
TGTGCGCCGCGGGGAGGGGTTGGAGCCGGTGCAGTATTATGGGAAGTGGC
CTTTCGTGCGTGTGTTTGGGGTGCAGGAGCCTCTGAGCGTCTTGTTTTCC
CTGGGCAATGCGTTTCCGCACGCGTGGTACATGTGGCGGGACTTGGACGT
GTTGGCCCCAAAAGAATACTACCTGAGCCCCGTTCTGATCCTCTTTGCGC
TGTGTGGCATCAACGCTTGGATGGGCTCTGCCATCTTCCACACTCGAGAC
ACGCCAGTGACACAACGCATTGACTACCATGCTGCCCAGCTGGTGCTGCT
GGCGCAGGCCGTGGTGAGCGTGATCCGG
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