prot_M-pyrifera_M_contig112910.2684.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112910.2684.1
Unique Nameprot_M-pyrifera_M_contig112910.2684.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: L8GRY6_ACACA (Coatomer subunit beta n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRY6_ACACA)

HSP 1 Score: 68.6 bits (166), Expect = 8.960e-12
Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    2 TYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEE 68
            TYPE R++I R+L  +L  I +S+V R ALWV+GEY+ + +DID AF+T+KG +G++P +   SE+E
Sbjct:  426 TYPELRESILRKLFLSLKHITASSVYRTALWVLGEYALTTDDIDQAFSTLKGEIGALPLVKDGSEDE 492          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A078BAW4_STYLE (Coatomer subunit beta n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078BAW4_STYLE)

HSP 1 Score: 68.2 bits (165), Expect = 1.220e-11
Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    3 YPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAEK 75
            +PEHRQ+I  ++ ++  DI+S  V+R+ALW++GEY+ +  D+D AF TIK  VGS+P    ++ + + +E  K
Sbjct:  447 HPEHRQSIFEKICDSFEDIRSHLVIRVALWIIGEYATTQTDVDRAFDTIKKNVGSLPLYKAEANDNQNQEETK 519          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A8J8P1P6_HALGN (Coatomer subunit beta n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P1P6_HALGN)

HSP 1 Score: 65.5 bits (158), Expect = 1.090e-10
Identity = 31/73 (42.47%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    3 YPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEE--EEAEEA 73
            + EHRQAI  ++ ++  DI++  V+R+ALW++GEY+ S +D+D AF TIK  +G++P     +E+  EE++EA
Sbjct:  447 HQEHRQAIFDKICDSFEDIRAHLVIRVALWILGEYASSQKDVDKAFETIKRNIGALPIFAPATEQTGEESKEA 519          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: J9HVP7_9SPIT (Coatomer subunit beta n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9HVP7_9SPIT)

HSP 1 Score: 65.1 bits (157), Expect = 1.490e-10
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = 0
Query:    3 YPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKS 65
            +PEHRQAI  ++ +   DI+S  V+R+ALW++GEY+ S  D++ AF TIK  +G++P  +  S
Sbjct:  445 HPEHRQAIFDKICDNFEDIRSHLVIRVALWIIGEYATSQRDVERAFDTIKKNIGALPLFSEDS 507          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A7S3CTS9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CTS9_9SPIT)

HSP 1 Score: 64.3 bits (155), Expect = 2.650e-10
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    3 YPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFL 61
            +PEH++A+ + L  ++  IK+  VLR+ +W+VGEYSE + DID AF  IK  +GS+P  
Sbjct:  315 HPEHQKALLQHLFNSIDSIKNHLVLRVTIWIVGEYSEQLSDIDQAFEAIKRNIGSLPIF 373          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: I0YWB4_COCSC (Coatomer subunit beta n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YWB4_COCSC)

HSP 1 Score: 64.3 bits (155), Expect = 2.780e-10
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    2 TYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAE 74
            T P+ R  I  RL++    I+SS V   ALW++ EYS S+EDI  A   I+  +GS+PF+  K E+++AEE E
Sbjct:  427 TNPKLRPTILERLIDTFSQIRSSRVCSCALWILSEYSTSVEDIHAALEVIRSGLGSMPFIKDKDEKDDAEEVE 499          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A4D8ZSP5_SALSN (Coatomer subunit beta n=15 Tax=Lamiales TaxID=4143 RepID=A0A4D8ZSP5_SALSN)

HSP 1 Score: 62.4 bits (150), Expect = 1.320e-9
Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    2 TYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAEK 75
            T P+ R +I  RLL+    I+++ V   ALW++GEYS S+ +++ A +TIK  +G +PF ++   EE+A+ ++K
Sbjct:  425 TNPKLRVSIVTRLLDTFYQIRAARVCSCALWIIGEYSLSLSEVESAISTIKQCLGDLPFFSISENEEDADSSKK 498          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A5A7R4W3_STRAF (Coatomer n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7R4W3_STRAF)

HSP 1 Score: 61.6 bits (148), Expect = 2.500e-9
Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    2 TYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAEK 75
            T P+ R ++  RLL+    I+++ V   ALW++GEYS S+ +++ A  TIK  +G +PF ++  EEE A+ ++K
Sbjct:  425 TNPKLRVSVITRLLDTFYQIRAARVCSCALWIIGEYSLSLSEVESAIATIKQCLGQLPFFSLSEEEESADSSKK 498          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A482ULG5_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ULG5_9ARCH)

HSP 1 Score: 58.9 bits (141), Expect = 3.080e-9
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    2 TYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEEAEK 75
            TYPE R  +  +L + + DI +S V R+ALW++G+YS+S  D+  AF  I+  +G +P  T   E  EA +A K
Sbjct:    3 TYPELRATVMNKLRDVMPDITASEVFRVALWLLGQYSQSEADVSAAFHVIRECIGPLPLHTPLKEFVEAAKAGK 76          
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Match: A0A7S0G8S0_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G8S0_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 4.470e-9
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    4 PEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTTIKGAVGSVPFLTVKSEEEEAEE 72
            PE R  I  +LL+AL  +K+ AV+R ALW++GEYSE+ + +  AF TI   VGS+P  T K + E+ E+
Sbjct:  347 PELRPGILEKLLDALPTMKAPAVVRGALWILGEYSETPQHLRHAFITIMENVGSLPLATTKPDLEDEED 415          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112910.2684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8GRY6_ACACA8.960e-1249.25Coatomer subunit beta n=1 Tax=Acanthamoeba castell... [more]
A0A078BAW4_STYLE1.220e-1141.10Coatomer subunit beta n=1 Tax=Stylonychia lemnae T... [more]
A0A8J8P1P6_HALGN1.090e-1042.47Coatomer subunit beta n=1 Tax=Halteria grandinella... [more]
J9HVP7_9SPIT1.490e-1044.44Coatomer subunit beta n=1 Tax=Oxytricha trifallax ... [more]
A0A7S3CTS9_9SPIT2.650e-1045.76Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
I0YWB4_COCSC2.780e-1043.84Coatomer subunit beta n=2 Tax=Coccomyxa TaxID=4189... [more]
A0A4D8ZSP5_SALSN1.320e-937.84Coatomer subunit beta n=15 Tax=Lamiales TaxID=4143... [more]
A0A5A7R4W3_STRAF2.500e-937.84Coatomer n=1 Tax=Striga asiatica TaxID=4170 RepID=... [more]
A0A482ULG5_9ARCH3.080e-940.54Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S0G8S0_9RHOD4.470e-946.38Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..71
e-value: 3.2E-6
score: 27.8
IPR016460Coatomer beta subunit (COPB1)PANTHERPTHR10635COATOMER SUBUNIT BETAcoord: 2..72
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112910contigM-pyrifera_M_contig112910:64..288 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112910.2684.1mRNA_M-pyrifera_M_contig112910.2684.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112910 64..297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112910.2684.1 ID=prot_M-pyrifera_M_contig112910.2684.1|Name=mRNA_M-pyrifera_M_contig112910.2684.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
MTYPEHRQAITRRLLEALCDIKSSAVLRIALWVVGEYSESMEDIDFAFTT
IKGAVGSVPFLTVKSEEEEAEEAEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016460COPB1
IPR016024ARM-type_fold