mRNA_M-pyrifera_M_contig112900.2681.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: A0A7S4HWG0_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HWG0_9EUKA) HSP 1 Score: 121 bits (303), Expect = 2.110e-28 Identity = 69/196 (35.20%), Postives = 110/196 (56.12%), Query Frame = 1
Query: 4 HLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNAL-------QMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRS-VPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLISSPDVRCSF 567
+ LPL + +K Q A + V AKH SVLY Q+W LLP+FC+ PTD ENF++LAKT+G+LL + L++I+C +L + LIQ + ++ D ++ + + + K++ S ++ + E+A +L+ I F+KNF PILFNIF C H +++ ++ + N I+AF S V SF
Sbjct: 245 NFLPLLSNLKRQSAAFEAADNTVAAKHFSVLYVQVWELLPAFCNFPTDVKENFKNLAKTIGTLLNDEPDLRVILCKSLTTLIIRNRSLIQATEDFYLENNQHDEDDRDSFAGRNEDSKELSSSMKVAHDLISPEQATENLEEIGKFAKNFFPILFNIF---CSMEHHTKSMKLRSAIYNAIKAFASASEETVLESF 437
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: A9RFV8_PHYPA (NUC173 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9RFV8_PHYPA) HSP 1 Score: 105 bits (262), Expect = 6.820e-23 Identity = 63/190 (33.16%), Postives = 105/190 (55.26%), Query Frame = 1
Query: 7 LLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDI-VSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLISSPDVRCSFLI 573
LLPL +++E+ +G+PV +K+ IW+LLPS C+ P+DTA+ F +AKT+G +L + L+ ++C++L++L+ +K +RGD+ + G + + ++ V+E + E A A+LKAI+G+S+NFLP+LFN+F + L TI A IS P SF +
Sbjct: 510 LLPLATRLRERARKCAADGKPVASKNAESCVQSIWALLPSLCNYPSDTAKGFGLIAKTLGDVLTKEPELRGLVCSSLKILVSQNRK----ARGDELGDKIGRKIAEEESSELSVAEQRARALYTPEVAAANLKAIAGYSRNFLPLLFNLFVAA--------PAEKRGDLQITIAAIASISDPQTVKSFFV 687
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: A0A151Z3I8_9MYCE (NUC173 domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3I8_9MYCE) HSP 1 Score: 103 bits (256), Expect = 4.350e-22 Identity = 63/184 (34.24%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 1 QHLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLISSPD 552
++ +PL +IKE+ + + + ++A++ +LY QIW+LLP F + P D +FR LAKT+G+++ D L+++IC +L +I K R + Y + S++ + E A +LK I GFSKN+LPILFN+F Q S K ++NTIEAFV I+ P+
Sbjct: 496 EYFVPLSQEIKEKSQQSINQNKIIEARNFDILYTQIWNLLPGFLNHPMDGVTSFRALAKTLGTMITEDTNLRVVICQSLSSMIN-------KLRETENTRPLPYIPLRKSYQQMSQ----------ERAKETLKVIGGFSKNYLPILFNVF-PQAASG-------QKFHMINTIEAFVSITEPE 654
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: A0A2R6WSB0_MARPO (NUC173 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WSB0_MARPO) HSP 1 Score: 96.7 bits (239), Expect = 8.150e-20 Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = 1
Query: 4 HLLPLGNQ--IKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAY------ASLKAISGFSKNFLPILFNIFNTQ 462
+LLPL ++ ++EQ L A +G+PV AK+C IW+LL S C+ P DTA +F +AKT+G L + GL+ +IC+ALQ LI + +RGD E G+ + F S + V + Y ASL I+G+S+NFLP+LFN F Q
Sbjct: 513 NLLPLASRLRVREQKLIA--DGKPVAAKNCEACVESIWALLSSVCNYPVDTATDFGRIAKTLGDALNKEAGLRGLICSALQTLILQNRM----ARGDQLE-GKKELKAMEEFNSSESTSVSNARARVADCYTPDAASASLATIAGYSRNFLPLLFNQFLAQ 666
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: Q54UV2_DICDI (ETS domain-containing protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54UV2_DICDI) HSP 1 Score: 92.4 bits (228), Expect = 2.430e-18 Identity = 62/182 (34.07%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 1 QHLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKV-VTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLIS 543
++ P+ +KE+G + +GR V+AK+ +LY Q+W LLP F + P D+ +FR +A+ +G L+ + GL+I+IC AL +I + +TK + + V E A LK++S FSKN+LPILFNIF T SN + + +LN IEA V I+
Sbjct: 504 EYFYPMAIAMKERGKQVEMDGRLVEAKNLEILYSQVWDLLPGFLNHPLDSDVSFRVIARNLGVALSDEPGLRIVICAALTQMINKLKDTQITKPPV------------------YIPLRKQHHLVTQERATQLLKSVSVFSKNYLPILFNIFPT---SNQDQ-----RYYILNAIEALVSIT 659
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: A0A2P6NXF6_9EUKA (NUC173 domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXF6_9EUKA) HSP 1 Score: 92.0 bits (227), Expect = 3.300e-18 Identity = 66/189 (34.92%), Postives = 97/189 (51.32%), Query Frame = 1
Query: 1 QHLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLISSPDVRCSF 567
Q+ LPL ++K++ A+K G+ +AK+ ++++ QIW+L P FC TD + F+ +A+++G LL S+ L+ IC L LI KS D+ KKA + P E+A ++LKAI+ F+KNFLPILFNIF + S + V NK T FV S P F
Sbjct: 684 QYFLPLSQRVKKRCQEAEKAGKGYEAKNWAIIFIQIWALWPRFCIRCTDIDKTFKSVAQSLGQLLTSEPQLREKICKGLNTLI--------KSNKPDS--------KKAVY-------------PPEQAASNLKAITVFTKNFLPILFNIFTDEATSKEDRRAV-NK-----TASNFVSASDPKTVMPF 837
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: A0A8J4Q4I2_9MYCE (NUC173 domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q4I2_9MYCE) HSP 1 Score: 91.7 bits (226), Expect = 4.470e-18 Identity = 58/181 (32.04%), Postives = 98/181 (54.14%), Query Frame = 1
Query: 1 QHLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLIS 543
++ LPL N +K + A+ EG V+A++ +LY Q+W LLP F + P D ++F+ +A+ +G+LL + GL+ +C +L ++I ++ T K F V + ++ E A LK+++ FS+N+LPILFNIF T SN + + ++N IE+FV I+
Sbjct: 495 EYFLPLANDMKTKARNAEGEGLYVEARNLDILYSQVWDLLPGFLNHPVDADQSFKLIARNLGTLLTEEVGLRNTLCTSLSLMINRLKETET--------------TKPLPF---VPLRKSYHNMTQERAKELLKSVAIFSRNYLPILFNIFPT---SNQDQ-----RYFIINAIESFVSIT 650
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: UPI001C09EFAF (RRP12-like protein isoform X1 n=4 Tax=Alosa TaxID=34772 RepID=UPI001C09EFAF) HSP 1 Score: 89.0 bits (219), Expect = 3.820e-17 Identity = 58/189 (30.69%), Postives = 86/189 (45.50%), Query Frame = 1
Query: 4 HLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLISSPDVRCSFL 570
+ LPL N +K + + G+ +++K L QIW++LP FC PTD F LA+T+GS L L++ IC AL+ LI RS E A L FSKNFLPILFN+F + P ++ + +L+TI ++ ++ P++ CSFL
Sbjct: 586 YFLPLANTLKRKAEELDQAGQKLESKVYQTLEQQIWTMLPGFCQRPTDVVGGFAGLARTLGSALNERPDLRLPICQALRTLI--------------------------------------RSAETAEEKAEL---GRFSKNFLPILFNVFTQKP---PESDSAPYRPAVLDTIRVYLTVTEPELVCSFL 730
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: F0ZEW1_DICPU (NUC173 domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZEW1_DICPU) HSP 1 Score: 88.6 bits (218), Expect = 5.230e-17 Identity = 57/181 (31.49%), Postives = 96/181 (53.04%), Query Frame = 1
Query: 1 QHLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRHLAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLIS 543
++ P+ +K++ A+ EG+ V+A++ +LY Q+W LLP F + P D ++F+ +A+ +G L+ + GL+ +IC AL I + E + K + + + + ++ E A L ++S FSKN+LPILFNIF T SN + + +LN IEAFV I+
Sbjct: 501 EYFYPMALAMKDRSKQAETEGKYVEARNLEILYSQVWDLLPGFLNHPLDGDQSFKVIARNIGVALSDELGLRTVICVALTQFINKLK--------------ESQQTKVSPY---IPYRKTHHTMSPERATQILNSVSVFSKNYLPILFNIFPT---SNQDQ-----RYFVLNAIEAFVSIT 656
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Match: A0A367K2V6_RHIST (NUC173 domain-containing protein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367K2V6_RHIST) HSP 1 Score: 88.2 bits (217), Expect = 6.990e-17 Identity = 63/189 (33.33%), Postives = 96/189 (50.79%), Query Frame = 1
Query: 7 LLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTAENFRH-LAKTVGSLLASDQGLQIIICNALQMLIQNFQKVVTKSRGDDAEEGEGYRRKKASFKDIVSEVQGDRSVPVEEAYASLKAISGFSKNFLPILFNIFNTQCHSNPHKNTVRNKAVLLNTIEAFVLISSP-DVRCSF 567
L+PLG+++ ++G AA +QAK L HQIWSL P FCDLPTD A F +A+ SLL S L+ + ALQ L++ Q +V KS DDA + Y KA EA +L +S F+ N+L + FN+++ + + + + + I+A++ I+ P DV +F
Sbjct: 423 LIPLGDRLAQKGEAAASRDLEMQAKVYETLVHQIWSLAPGFCDLPTDLARGFNDSVAERFSSLLYSQPELRPTLAQALQFLVEKNQALV-KSSADDAHLMKAYGLTKA------------------EAAQNLTFLSKFAVNYLAVFFNVYS--------QIAPQFRGFMADVIKAYLTITPPEDVNSTF 584 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112900.2681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112900.2681.1 >prot_M-pyrifera_M_contig112900.2681.1 ID=prot_M-pyrifera_M_contig112900.2681.1|Name=mRNA_M-pyrifera_M_contig112900.2681.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp QHLLPLGNQIKEQGLAAKKEGRPVQAKHCSVLYHQIWSLLPSFCDLPTDTback to top mRNA from alignment at M-pyrifera_M_contig112900:3..575- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112900.2681.1 ID=mRNA_M-pyrifera_M_contig112900.2681.1|Name=mRNA_M-pyrifera_M_contig112900.2681.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig112900:3..575- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112900:3..575- >mRNA_M-pyrifera_M_contig112900.2681.1 ID=mRNA_M-pyrifera_M_contig112900.2681.1|Name=mRNA_M-pyrifera_M_contig112900.2681.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig112900:3..575- (Macrocystis pyrifera P11B4 male)back to top |