mRNA_M-pyrifera_M_contig112785.2664.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig112785.2664.1
Unique NamemRNA_M-pyrifera_M_contig112785.2664.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A2R5GMA8_9STRA (RuvB-like helicase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMA8_9STRA)

HSP 1 Score: 253 bits (647), Expect = 6.180e-80
Identity = 128/178 (71.91%), Postives = 153/178 (85.96%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAE-LLKAQAD 531
            LR E+NKVV RYI  G+A L PGVLF+DE HMLDIECFTYLNRALES+LAP+VIFATNRG+STIRGTD+ +PHGIP+DLLDRTLI+RT+PY LE+ + IL+IRA TEG+TL  EAL  LGEIG++TSLR+AVQLLTPA+ILA T GRD +++ D++EVD LFFDAKASA+ L K  AD
Sbjct:  277 LRQEINKVVNRYIDQGIAELVPGVLFIDEVHMLDIECFTYLNRALESTLAPIVIFATNRGVSTIRGTDVRSPHGIPVDLLDRTLIVRTQPYTLEEQIGILSIRASTEGITLDEEALARLGEIGSKTSLRFAVQLLTPAKILAATAGRDQVQLGDIEEVDRLFFDAKASAKHLAKLDAD 454
[Close]
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A812VIR6_9DINO (RuvB-like helicase n=5 Tax=Suessiales TaxID=89954 RepID=A0A812VIR6_9DINO)

HSP 1 Score: 250 bits (639), Expect = 9.320e-79
Identity = 124/180 (68.89%), Postives = 152/180 (84.44%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LR E+NKVV RYI  G+A L PGVLF+DE HMLDIECFTYLNRALES+L+P++IFATNRGI TIRGTD++APHGIP+DLLDR +IIRT PY +++I++++ IRAQTE L+L  +AL  LGEIGA TSLRY VQLLTPA ILA+T GR+ I   D++E+D LFFDAK+SA+LL  QADKY+
Sbjct:  275 LRLEINKVVNRYIDQGIAELIPGVLFIDEVHMLDIECFTYLNRALESTLSPIIIFATNRGICTIRGTDIVAPHGIPVDLLDRLVIIRTMPYSVDEIIQVVNIRAQTESLSLEEDALVLLGEIGANTSLRYVVQLLTPASILAKTNGREAIVREDIEEIDSLFFDAKSSAKLLAEQADKYI 454
[Close]
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A6V2U2W2_HETAK (RuvB-like helicase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2U2W2_HETAK)

HSP 1 Score: 250 bits (638), Expect = 1.280e-78
Identity = 125/180 (69.44%), Postives = 156/180 (86.67%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LRTE+NKVV RYI  GVA L PGVLF+DE HMLDIECFT+LNRALESSL+P+VIFATNRG+ TI+GTD+++PHGIP+DLLDR LI+RT PY LE++V+I+ IRAQ E + +  EAL A+GEIGA+TSLRYAVQ+LTPARILA+T GR+ I + DV+E+D LFFDAKASA++L +Q++ YL
Sbjct:  275 LRTEINKVVNRYIDQGVAELVPGVLFIDEVHMLDIECFTFLNRALESSLSPIVIFATNRGVCTIKGTDMISPHGIPVDLLDRMLILRTMPYSLEEMVQIIGIRAQAEEIEIEDEALAAIGEIGAKTSLRYAVQMLTPARILAETSGREKIGLGDVEEIDELFFDAKASAKIL-SQSEGYL 453
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BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A2V0P0H7_9CHLO (RuvB-like helicase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P0H7_9CHLO)

HSP 1 Score: 240 bits (613), Expect = 3.340e-78
Identity = 121/180 (67.22%), Postives = 147/180 (81.67%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LR E+N+VV RYI  GVA L PGVLF+DE HMLD+ECFTYLNRALES+LAP+VIFATNRGI  IRGTD+ +PHG+P+DLLDR +IIRT PY   ++V+ILAIRAQ EG+T+  E+L  LG IG RTSLR+AVQLLTPA ++A T GRD I + D++E+D LF DAK+SA LL  QADKY+
Sbjct:   19 LRQEINRVVNRYIDQGVAELVPGVLFVDEVHMLDMECFTYLNRALESALAPIVIFATNRGICEIRGTDIKSPHGVPIDLLDRLVIIRTLPYSPAEMVQILAIRAQVEGITVDEESLAHLGAIGERTSLRHAVQLLTPASLMAATNGRDAISMGDLEEIDGLFHDAKSSARLLAEQADKYI 198
[Close]
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A7S4A7V5_9STRA (RuvB-like helicase n=4 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S4A7V5_9STRA)

HSP 1 Score: 248 bits (634), Expect = 5.260e-78
Identity = 125/180 (69.44%), Postives = 152/180 (84.44%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LRTE+N+VV RYI  G A L PGVLF+DE HMLDIECFTYLNRALESSLAP+VIFATNRG+ TIRGTD+++PHGIP+DLLDR LI+RT PY LE+I++I++IRA+TE L +  +AL ALGEIG RTSLRYAVQ+L P++ILA+T GR  I ++D+ EVD LFFDAKASA +L A +D YL
Sbjct:  276 LRTEINRVVNRYIDQGTAELVPGVLFVDEVHMLDIECFTYLNRALESSLAPIVIFATNRGVCTIRGTDVVSPHGIPVDLLDRMLILRTMPYSLEEIIQIMSIRAETESLDIEDQALAALGEIGVRTSLRYAVQMLAPSKILAETNGRTSIHLSDIAEVDDLFFDAKASAAIL-ANSDGYL 454
[Close]
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A5A8CKQ0_CAFRO (RuvB-like helicase n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CKQ0_CAFRO)

HSP 1 Score: 248 bits (634), Expect = 5.400e-78
Identity = 127/180 (70.56%), Postives = 151/180 (83.89%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LR E+NKVV RYI +GVA L PGVLF+DE HMLDIECFTYLNRALESSL+P+VIFATNRGI TIRGTD+LAPHGIP+DLLDR L+IRT PY LE+  +I+AIRAQTE + L  EAL  L EIG++TSLR+AVQLLTPARILA  +GR+ I   DV+E++ LFFDAKASA++L A+A  +L
Sbjct:  276 LRREINKVVNRYIDTGVAELVPGVLFIDEVHMLDIECFTYLNRALESSLSPIVIFATNRGICTIRGTDVLAPHGIPVDLLDRMLVIRTMPYSLEETAQIIAIRAQTESIRLHEEALAVLAEIGSKTSLRFAVQLLTPARILAGRQGREDIIAEDVREIEDLFFDAKASAKVLAAEASHFL 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A7S0FMB1_9STRA (RuvB-like helicase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FMB1_9STRA)

HSP 1 Score: 240 bits (613), Expect = 7.640e-78
Identity = 120/180 (66.67%), Postives = 152/180 (84.44%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LRTE+N+VV RYI  GVA L PGVLF+DE HMLDIECFTYLNR+LES+L+P+V+FATNRG+  IRGTD+LAPHG+P+DLLDR LI+RT PY  E++V+I++IRA  EG+ L  EAL  LG+IG++TSLRYAVQ+LTP+RI+A+T GR  I  +DVKEVD LFFD KASA+LL A+++ Y+
Sbjct:   45 LRTEINRVVNRYIDQGVAELVPGVLFVDEVHMLDIECFTYLNRSLESTLSPIVVFATNRGVCKIRGTDVLAPHGVPVDLLDRMLIVRTMPYSHEEMVQIISIRASVEGIELEDEALKDLGDIGSKTSLRYAVQMLTPSRIMAETCGRTKIATSDVKEVDTLFFDGKASAQLL-AKSEGYM 223
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BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A7S1AYA7_NOCSC (RuvB-like helicase n=2 Tax=Dinophyceae TaxID=2864 RepID=A0A7S1AYA7_NOCSC)

HSP 1 Score: 246 bits (629), Expect = 2.960e-77
Identity = 124/180 (68.89%), Postives = 148/180 (82.22%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LR E+NKVV RYI  G+A L PGVLF+DE HMLDIECFTYLNRALES+L+P+V+FATNRGI TIRGTD+++PHGIPLDLLDR +IIRT PY +++IV+++ IRA TE L +   AL  LGEIG  TSLRYAVQLLTP+ ILA+T GRD I   D+ EVD LFFDAK+SA+LL  QADKY+
Sbjct:  275 LRLEINKVVNRYIDQGIAELVPGVLFIDEVHMLDIECFTYLNRALESTLSPIVVFATNRGICTIRGTDIVSPHGIPLDLLDRLVIIRTMPYSVDEIVQVVNIRAVTENLKIDENALVMLGEIGVNTSLRYAVQLLTPSSILAKTSGRDSISKEDIAEVDSLFFDAKSSAKLLAEQADKYI 454
[Close]
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A0A7S3MK56_9STRA (RuvB-like helicase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MK56_9STRA)

HSP 1 Score: 246 bits (627), Expect = 6.080e-77
Identity = 126/180 (70.00%), Postives = 153/180 (85.00%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LR+E+N+VV RYI  GVA L PGVLF+DE HMLDIECFT+LNR LES L+P+V+FATNRG+ TIRGTD+LAPHG+P+DLLDR LIIRT PY LE++V+I++IRA+TE + +  EAL A+GEIGARTSLRYAVQLLTP  ILAQT GR+ I  +DV+EVD LF DAKASA+LL A++D YL
Sbjct:  277 LRSEINRVVNRYIDQGVAELVPGVLFIDEVHMLDIECFTFLNRTLESPLSPIVVFATNRGVCTIRGTDVLAPHGVPVDLLDRMLIIRTMPYSLEEMVQIVSIRAETETIQVDEEALAAMGEIGARTSLRYAVQLLTPGNILAQTAGRECINASDVEEVDELFKDAKASAKLL-ARSDGYL 455
[Close]
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Match: A8J4W8_CHLRE (RuvB-like helicase n=7 Tax=Chlamydomonadales TaxID=3042 RepID=A8J4W8_CHLRE)

HSP 1 Score: 245 bits (626), Expect = 8.360e-77
Identity = 124/180 (68.89%), Postives = 148/180 (82.22%), Query Frame = 1 
Query:    1 LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLAPVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRILAIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGIEVADVKEVDLLFFDAKASAELLKAQADKYL 540
            LR E+NKVV RYI  GVA L PGVLF+DE HMLDIECFTYLNRALESSL+P+VIFATNRG+ TIRGTD+ +PHG+P+DLLDR +IIRT PY L ++V+ILAIRAQ EG+ +  E+L  LGE+G RTSLR+AVQLLTPA +LA+T GRD I   D+++VD LF DAK SA LL  QADKY+
Sbjct:  275 LRQEINKVVNRYIDQGVAELVPGVLFIDEVHMLDIECFTYLNRALESSLSPIVIFATNRGLCTIRGTDITSPHGVPVDLLDRLVIIRTLPYTLSEMVQILAIRAQVEGIGIDEESLAFLGEVGERTSLRHAVQLLTPASMLARTNGRDAIVRGDLEDVDNLFHDAKYSARLLAEQADKYI 454
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112785.2664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5GMA8_9STRA6.180e-8071.91RuvB-like helicase n=1 Tax=Hondaea fermentalgiana ... [more]
A0A812VIR6_9DINO9.320e-7968.89RuvB-like helicase n=5 Tax=Suessiales TaxID=89954 ... [more]
A0A6V2U2W2_HETAK1.280e-7869.44RuvB-like helicase n=2 Tax=Heterosigma akashiwo Ta... [more]
A0A2V0P0H7_9CHLO3.340e-7867.22RuvB-like helicase n=1 Tax=Raphidocelis subcapitat... [more]
A0A7S4A7V5_9STRA5.260e-7869.44RuvB-like helicase n=4 Tax=Pelagomonadales TaxID=5... [more]
A0A5A8CKQ0_CAFRO5.400e-7870.56RuvB-like helicase n=2 Tax=Sar TaxID=2698737 RepID... [more]
A0A7S0FMB1_9STRA7.640e-7866.67RuvB-like helicase n=1 Tax=Minutocellus polymorphu... [more]
A0A7S1AYA7_NOCSC2.960e-7768.89RuvB-like helicase n=2 Tax=Dinophyceae TaxID=2864 ... [more]
A0A7S3MK56_9STRA6.080e-7770.00RuvB-like helicase n=1 Tax=Spumella elongata TaxID... [more]
A8J4W8_CHLRE8.360e-7768.89RuvB-like helicase n=7 Tax=Chlamydomonadales TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112785contigM-pyrifera_M_contig112785:3..548 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score254.2
Seed ortholog evalue4.5e-65
Seed eggNOG ortholog44056.XP_009041661.1
Preferred nameRUVBL1
KEGG koko:K04499
KEGG Pathwayko04310,map04310
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000123,GO:0000166,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000491,GO:0000492,GO:0000785,GO:0000790,GO:0000812,GO:0001085,GO:0001091,GO:0001094,GO:0001098,GO:0001099,GO:0002119,GO:0002164,GO:0002682,GO:0002831,GO:0003674,GO:0003678,GO:0003712,GO:0003713,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006355,GO:0006357,GO:0006417,GO:0006464,GO:0006473,GO:0006475,GO:0006508,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007507,GO:0008026,GO:0008094,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009791,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010755,GO:0010756,GO:0010941,GO:0010954,GO:0015630,GO:0016020,GO:0016043,GO:0016363,GO:0016462,GO:0016569,GO:0016570,GO:0016573,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017025,GO:0017076,GO:0017111,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030111,GO:0030162,GO:0030177,GO:0030554,GO:0031011,GO:0031055,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031497,GO:0031929,GO:0031974,GO:0031981,GO:0032101,GO:0032268,GO:0032270,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033202,GO:0034080,GO:0034248,GO:0034250,GO:0034399,GO:0034508,GO:0034622,GO:0034708,GO:0034724,GO:0034728,GO:0035060,GO:0035097,GO:0035267,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0040008,GO:0042127,GO:0042623,GO:0042981,GO:0043044,GO:0043067,GO:0043138,GO:0043139,GO:0043140,GO:0043141,GO:0043167,GO:0043168,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043531,GO:0043543,GO:0043900,GO:0043933,GO:0043967,GO:0043968,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044665,GO:0044703,GO:0045088,GO:0045727,GO:0045862,GO:0045893,GO:0045935,GO:0046620,GO:0048232,GO:0048285,GO:0048507,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048609,GO:0048638,GO:0048731,GO:0048856,GO:0050776,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051117,GO:0051171,GO:0051173,GO:0051225,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0060303,GO:0060420,GO:0060828,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070035,GO:0070209,GO:0070603,GO:0070613,GO:0070646,GO:0070647,GO:0070925,GO:0071103,GO:0071339,GO:0071704,GO:0071824,GO:0071826,GO:0071840,GO:0072359,GO:0080090,GO:0080134,GO:0090263,GO:0090307,GO:0097159,GO:0097255,GO:0097346,GO:0097367,GO:0140014,GO:0140097,GO:0140110,GO:1900150,GO:1901265,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1902680,GO:1902850,GO:1903047,GO:1903317,GO:1903319,GO:1903506,GO:1903508,GO:1904837,GO:1904949,GO:1990234,GO:1990904,GO:2000026,GO:2000072,GO:2000112,GO:2000269,GO:2001141
EggNOG free text desc.ATP-dependent 5'-3' DNA helicase activity
EggNOG OGsCOG1224@1,KOG1942@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Exons1
Model size546
Cds size546
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815641.6180859-CDS-M-pyrifera_M_contig112785:2..5481622815641.6180859-CDS-M-pyrifera_M_contig112785:2..548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112785 3..548 +
1692277501.0477042-CDS-M-pyrifera_M_contig112785:2..5481692277501.0477042-CDS-M-pyrifera_M_contig112785:2..548Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig112785 3..548 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112785.2664.1prot_M-pyrifera_M_contig112785.2664.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig112785 3..548 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig112785.2664.1

>prot_M-pyrifera_M_contig112785.2664.1 ID=prot_M-pyrifera_M_contig112785.2664.1|Name=mRNA_M-pyrifera_M_contig112785.2664.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
LRTEVNKVVERYIQSGVATLAPGVLFLDECHMLDIECFTYLNRALESSLA
PVVIFATNRGISTIRGTDLLAPHGIPLDLLDRTLIIRTRPYVLEDIVRIL
AIRAQTEGLTLAAEALGALGEIGARTSLRYAVQLLTPARILAQTRGRDGI
EVADVKEVDLLFFDAKASAELLKAQADKYLG*
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mRNA from alignment at M-pyrifera_M_contig112785:3..548+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig112785.2664.1 ID=mRNA_M-pyrifera_M_contig112785.2664.1|Name=mRNA_M-pyrifera_M_contig112785.2664.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig112785:3..548+ (Macrocystis pyrifera P11B4 male)
CTGCGCACTGAGGTGAACAAAGTTGTGGAACGTTACATTCAATCTGGAGT
TGCAACACTTGCACCTGGAGTTTTGTTCTTGGATGAGTGCCATATGCTTG
ACATTGAATGTTTCACGTACCTCAACCGTGCTCTTGAATCTTCCTTGGCT
CCTGTTGTCATCTTTGCTACAAATCGTGGGATTTCTACAATTCGTGGCAC
TGATTTGCTTGCACCACATGGCATTCCATTGGATTTGCTTGATCGTACTC
TCATCATCCGAACACGCCCGTATGTCCTTGAAGACATTGTGAGAATTCTT
GCCATTCGTGCTCAAACTGAAGGACTCACACTTGCAGCAGAAGCTCTTGG
TGCATTGGGAGAAATCGGAGCACGAACTTCCCTTCGCTATGCTGTCCAAC
TACTCACACCAGCACGCATCCTTGCACAAACCAGAGGAAGAGACGGTATT
GAAGTTGCAGACGTCAAAGAAGTTGACCTTCTCTTCTTTGATGCAAAGGC
ATCTGCAGAACTTCTCAAAGCACAAGCAGACAAGTACCTCGGATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig112785:3..548+

>mRNA_M-pyrifera_M_contig112785.2664.1 ID=mRNA_M-pyrifera_M_contig112785.2664.1|Name=mRNA_M-pyrifera_M_contig112785.2664.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig112785:3..548+ (Macrocystis pyrifera P11B4 male)
CTGCGCACTGAGGTGAACAAAGTTGTGGAACGTTACATTCAATCTGGAGT
TGCAACACTTGCACCTGGAGTTTTGTTCTTGGATGAGTGCCATATGCTTG
ACATTGAATGTTTCACGTACCTCAACCGTGCTCTTGAATCTTCCTTGGCT
CCTGTTGTCATCTTTGCTACAAATCGTGGGATTTCTACAATTCGTGGCAC
TGATTTGCTTGCACCACATGGCATTCCATTGGATTTGCTTGATCGTACTC
TCATCATCCGAACACGCCCGTATGTCCTTGAAGACATTGTGAGAATTCTT
GCCATTCGTGCTCAAACTGAAGGACTCACACTTGCAGCAGAAGCTCTTGG
TGCATTGGGAGAAATCGGAGCACGAACTTCCCTTCGCTATGCTGTCCAAC
TACTCACACCAGCACGCATCCTTGCACAAACCAGAGGAAGAGACGGTATT
GAAGTTGCAGACGTCAAAGAAGTTGACCTTCTCTTCTTTGATGCAAAGGC
ATCTGCAGAACTTCTCAAAGCACAAGCAGACAAGTACCTCGGATAACTGC
GCACTGAGGTGAACAAAGTTGTGGAACGTTACATTCAATCTGGAGTTGCA
ACACTTGCACCTGGAGTTTTGTTCTTGGATGAGTGCCATATGCTTGACAT
TGAATGTTTCACGTACCTCAACCGTGCTCTTGAATCTTCCTTGGCTCCTG
TTGTCATCTTTGCTACAAATCGTGGGATTTCTACAATTCGTGGCACTGAT
TTGCTTGCACCACATGGCATTCCATTGGATTTGCTTGATCGTACTCTCAT
CATCCGAACACGCCCGTATGTCCTTGAAGACATTGTGAGAATTCTTGCCA
TTCGTGCTCAAACTGAAGGACTCACACTTGCAGCAGAAGCTCTTGGTGCA
TTGGGAGAAATCGGAGCACGAACTTCCCTTCGCTATGCTGTCCAACTACT
CACACCAGCACGCATCCTTGCACAAACCAGAGGAAGAGACGGTATTGAAG
TTGCAGACGTCAAAGAAGTTGACCTTCTCTTCTTTGATGCAAAGGCATCT
GCAGAACTTCTCAAAGCACAAGCAGACAAGTACCTCGGATAA
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