prot_M-pyrifera_M_contig112756.2654.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig112756.2654.1
Unique Name	prot_M-pyrifera_M_contig112756.2654.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	193

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A3C0HRA8_9ACTN (Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HRA8_9ACTN)

HSP 1 Score: 371 bits (952), Expect = 3.070e-127
Identity = 172/193 (89.12%), Postives = 182/193 (94.30%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R++VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRMAG EVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPY+PDFTAP+DAGD KAVGKRPT+++SRPNFIELC QL  EDEK FE LFRRLGLSVDWTRTYETINDHCRRISQL FL NL  G+AYQ+EAPSLWDVTFQTAVAQAELEDKEMPGAYHKL
Sbjct:   37 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMAGSEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYNPDFTAPNDAGDPKAVGKRPTIAVSRPNFIELCVQLTVEDEKAFEGLFRRLGLSVDWTRTYETINDHCRRISQLAFLDNLNAGQAYQIEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 229

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A2D8LWN9_9ACTN (Valine--tRNA ligase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LWN9_9ACTN)

HSP 1 Score: 375 bits (962), Expect = 1.910e-122
Identity = 174/193 (90.16%), Postives = 182/193 (94.30%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R++VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRMAG EVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGD KAVGKRPT+++SRPNFIELC QL  EDEK FE LFRRLGLSVDWTRTYETINDHCRRISQL FL NL  G+AYQ+EAPSLWDVTFQTAVAQAELEDKEMPGAYHKL
Sbjct:   37 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMAGSEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDPKAVGKRPTIAVSRPNFIELCVQLTVEDEKAFEGLFRRLGLSVDWTRTYETINDHCRRISQLAFLDNLNAGQAYQIEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 229

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A7K1Z958_9ACTN (Valine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z958_9ACTN)

HSP 1 Score: 347 bits (891), Expect = 8.700e-112
Identity = 164/193 (84.97%), Postives = 175/193 (90.67%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R++VFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAG+EVFYPMGWDDNGLPTERRVQNY+GV CDPSLPYD DF+ P DAG+ K V KR  +SISRPNFI+LC +L  EDEKVFE LFR LGLSVDWTRTY TINDHCRR+SQL FL NL RGEAYQVEAPSLWDVTFQTAVAQAELEDKE+PGAYHKL
Sbjct:   37 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGREVFYPMGWDDNGLPTERRVQNYYGVVCDPSLPYDGDFSVPADAGNPKEVSKRRPISISRPNFIDLCLELTGEDEKVFEQLFRHLGLSVDWTRTYTTINDHCRRVSQLAFLDNLARGEAYQVEAPSLWDVTFQTAVAQAELEDKEVPGAYHKL 229

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A3M2FWS9_ACTSX (Valine--tRNA ligase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FWS9_ACTSX)

HSP 1 Score: 347 bits (890), Expect = 9.060e-112
Identity = 159/193 (82.38%), Postives = 176/193 (91.19%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R+++F+IDTPPPTVSGSLHVGHVFSYTHTDTVARYQRM G+EVFYPMGWDDNGLPTERRVQNY+GVRCDPSLPYDPDFT P DAG+ KA+ KR  ++ISRPNFIELC +L  EDEK FE LFR+LGLSVDWTRTY TI+DHCRR+SQL F  NL+RGEAYQVEAPSLWDVTFQTAVAQAELED+E+PGAYH L
Sbjct:   37 RDEIFAIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMRGREVFYPMGWDDNGLPTERRVQNYYGVRCDPSLPYDPDFTPPADAGNPKAIAKREVIAISRPNFIELCHRLTAEDEKAFEGLFRKLGLSVDWTRTYATIDDHCRRVSQLAFCENLQRGEAYQVEAPSLWDVTFQTAVAQAELEDRELPGAYHTL 229

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A2D9PT51_9ACTN (Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D9PT51_9ACTN)

HSP 1 Score: 325 bits (833), Expect = 1.420e-109
Identity = 152/193 (78.76%), Postives = 172/193 (89.12%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R +VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRM+G+EVFYPMGWDDNGLPTERRVQNYFGVRC+PSL YDPDFTAP+DAGD KA+ +R  V+ISR NFI+LC  L  EDE+ FEALFRRLGLSVDWT+ Y TI++ C+R+SQ GFL NL RGEAYQ+EAP+LWDVT +TAVAQAELED+E PGAYH L
Sbjct:   46 RAEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMSGREVFYPMGWDDNGLPTERRVQNYFGVRCEPSLTYDPDFTAPEDAGDPKAMKERGDVAISRRNFIDLCHVLTAEDEQAFEALFRRLGLSVDWTQHYTTIDERCQRVSQRGFLRNLARGEAYQIEAPTLWDVTHRTAVAQAELEDRERPGAYHTL 238

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A382BCV1_9ZZZZ (Valine--tRNA ligase (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382BCV1_9ZZZZ)

HSP 1 Score: 323 bits (828), Expect = 8.140e-109
Identity = 151/193 (78.24%), Postives = 167/193 (86.53%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R +VFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRMAG+EVFYPMGWDDNGLPTERRVQNYFGVRC+PSLPYDPDF APDDAGD  A+ KR  + ISR NFI+LC  L  EDE+ FE LFRRLGLSVDWT+ Y TI++ C+R SQ  FL NL RGEAYQ+EAPSLWDVT +TAVAQAELED++ PGAYH L
Sbjct:   46 RSEVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMAGREVFYPMGWDDNGLPTERRVQNYFGVRCEPSLPYDPDFAAPDDAGDPTAIKKRGEIDISRRNFIDLCHVLTAEDEQAFETLFRRLGLSVDWTQHYATIDERCQRTSQRAFLRNLARGEAYQIEAPSLWDVTHRTAVAQAELEDRDRPGAYHTL 238

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A6N9EPZ2_9ACTN (Valine--tRNA ligase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EPZ2_9ACTN)

HSP 1 Score: 337 bits (863), Expect = 1.640e-107
Identity = 154/193 (79.79%), Postives = 173/193 (89.64%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R +VFSIDTPPPTVSGSLHVGHVFSYTHTD +AR++RMAG+ VFYPMGWDDNGLPTERRVQNY+GVRCDPSLPYDPDF AP DAG   AV KR T+++SRPNFI+LC +L   DE+ FE LFRR+GLSVDWTRTY TI+ HCRR+SQL FL NLERGEAYQ+EAPSLWDVTFQTAVAQAEL+D+E+PGAYHKL
Sbjct:   45 RSEVFSIDTPPPTVSGSLHVGHVFSYTHTDIIARHRRMAGQAVFYPMGWDDNGLPTERRVQNYYGVRCDPSLPYDPDFAAPPDAGRPSAVAKRRTIAVSRPNFIDLCEELTASDERAFEDLFRRIGLSVDWTRTYATIDTHCRRVSQLAFLENLERGEAYQIEAPSLWDVTFQTAVAQAELDDREVPGAYHKL 237

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A2E6XGI6_9CHLR (Valine--tRNA ligase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E6XGI6_9CHLR)

HSP 1 Score: 334 bits (857), Expect = 1.240e-106
Identity = 157/193 (81.35%), Postives = 173/193 (89.64%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R++VFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNY+GVRCDPSLPYDPDF AP DAGD KA+ KR  + ISR NFI LC +L  EDEK FEAL+R LGLS+DWT+TY TI+D C+R++Q  FL NLERGEAYQVEAPSLWDVTF+TAVAQAELED+E PGAYH+L
Sbjct:   44 RDEVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYYGVRCDPSLPYDPDFEAPADAGDPKAIKKRGDLDISRRNFIALCHELTLEDEKAFEALWRHLGLSIDWTQTYATIDDRCQRVAQRAFLRNLERGEAYQVEAPSLWDVTFRTAVAQAELEDRERPGAYHQL 236

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A3D5GIN1_9ACTN (Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5GIN1_9ACTN)

HSP 1 Score: 323 bits (829), Expect = 2.340e-105
Identity = 151/193 (78.24%), Postives = 169/193 (87.56%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R  VFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAG+EVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPY+P+F  P DAGD KA+ KR  V +SRPNF+ELC  L  EDEK FE+LFRRLGLSVDWT+ Y TI++ C+++SQ  FL NL RGEAYQ+EAPSLWDVT +TAVAQAELED+E PGAY++L
Sbjct:   43 RVDVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGREVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYEPEFAPPADAGDQKAIKKRGEVRVSRPNFVELCHVLTAEDEKAFESLFRRLGLSVDWTQHYATIDERCQQVSQRAFLRNLARGEAYQIEAPSLWDVTHRTAVAQAELEDRERPGAYYRL 235

[Close]

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Match: A0A800IBD6_9ACTN (Valine--tRNA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IBD6_9ACTN)

HSP 1 Score: 328 bits (842), Expect = 1.590e-104
Identity = 153/193 (79.27%), Postives = 171/193 (88.60%), Query Frame = 0

Query:    1 REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISRPNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGFLGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL 193
            R QVFSIDTPPPTVSGSLHVGHVFSYTHTDT+ARYQRM GKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDP+FT P+DAGDAK + KR    ISR NF+ELC  L +EDEKVFE+L+R+LGLS+DW  TY TI+D C+R++Q  FL NLERGEAYQ+EAPSLWDVTF+TAVAQAELED+  PGAYH+L
Sbjct:   45 RAQVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMQGKEVFYPMGWDDNGLPTERRVQNYFGVRCDPSLPYDPNFTPPEDAGDAKVIKKRRDHDISRRNFVELCHLLTQEDEKVFESLWRQLGLSIDWNLTYATIDDRCQRMAQRAFLRNLERGEAYQIEAPSLWDVTFRTAVAQAELEDRPRPGAYHQL 237

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig112756.2654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A3C0HRA8_9ACTN	3.070e-127	89.12	Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrob...	[more]
A0A2D8LWN9_9ACTN	1.910e-122	90.16	Valine--tRNA ligase n=7 Tax=Acidimicrobiaceae bact...	[more]
A0A7K1Z958_9ACTN	8.700e-112	84.97	Valine--tRNA ligase n=2 Tax=Acidimicrobiaceae bact...	[more]
A0A3M2FWS9_ACTSX	9.060e-112	82.38	Valine--tRNA ligase n=1 Tax=Actinomyces sp. TaxID=...	[more]
A0A2D9PT51_9ACTN	1.420e-109	78.76	Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrob...	[more]
A0A382BCV1_9ZZZZ	8.140e-109	78.24	Valine--tRNA ligase (Fragment) n=1 Tax=marine meta...	[more]
A0A6N9EPZ2_9ACTN	1.640e-107	79.79	Valine--tRNA ligase n=8 Tax=Acidimicrobiaceae bact...	[more]
A0A2E6XGI6_9CHLR	1.240e-106	81.35	Valine--tRNA ligase n=1 Tax=Chloroflexi bacterium ...	[more]
A0A3D5GIN1_9ACTN	2.340e-105	78.24	Valine--tRNA ligase (Fragment) n=1 Tax=Acidimicrob...	[more]
A0A800IBD6_9ACTN	1.590e-104	79.27	Valine--tRNA ligase n=1 Tax=Acidimicrobiia bacteri...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 94..189 e-value: 9.3E-10 score: 37.4 coord: 3..65 e-value: 1.0E-16 score: 60.4
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..191 e-value: 1.3E-39 score: 138.2
None	No IPR available	PANTHER	PTHR11946	VALYL-TRNA SYNTHETASES	coord: 97..189
None	No IPR available	PANTHER	PTHR11946	VALYL-TRNA SYNTHETASES	coord: 3..62
None	No IPR available	PANTHER	PTHR11946:SF93	VALINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 2	coord: 97..189
None	No IPR available	PANTHER	PTHR11946:SF93	VALINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 2	coord: 3..62
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 3..187
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 12..23

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig112756	contig	M-pyrifera_M_contig112756:3..581 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig112756.2654.1	mRNA_M-pyrifera_M_contig112756.2654.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig112756 3..581 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig112756.2654.1 ID=prot_M-pyrifera_M_contig112756.2654.1|Name=mRNA_M-pyrifera_M_contig112756.2654.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
REQVFSIDTPPPTVSGSLHVGHVFSYTHTDTVARYQRMAGKEVFYPMGWD
DNGLPTERRVQNYFGVRCDPSLPYDPDFTAPDDAGDAKAVGKRPTVSISR
PNFIELCTQLAEEDEKVFEALFRRLGLSVDWTRTYETINDHCRRISQLGF
LGNLERGEAYQVEAPSLWDVTFQTAVAQAELEDKEMPGAYHKL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002300	aa-tRNA-synth_Ia
IPR014729	Rossmann-like_a/b/a_fold
IPR001412	aa-tRNA-synth_I_CS