prot_M-pyrifera_M_contig10011.26.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10011.26.1
Unique Nameprot_M-pyrifera_M_contig10011.26.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
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BLAST of mRNA_M-pyrifera_M_contig10011.26.1 vs. uniprot
Match: D7FVJ8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ8_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.120e-22
Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 0 
Query:    3 LLKAGADPTVRTPEDRPPLSV-IAATASNSDSAEIVRSLLRGGAPPDAFCMDGLFPLHIACEAGGDAGVVQALLAGGAEINSLCPGEDFLLPIHLAARSGHTKAVRALATTAG--CRLDEK 120
            LL+AG D T R   DR  L+V +A       SA +V++LL+ GA P +FC  G  PLH AC +G D  VVQALL GGA +++ CPG  FLLPIH+A  + HT  VR L  T+G  C L++K
Sbjct: 1359 LLEAGGDHTERDILDRSCLTVAVAGVKPTRRSASVVQALLKWGADPTSFCAKGFNPLHHACASGVDPAVVQALLDGGAAVDTPCPGYRFLLPIHMAVHNEHTDVVRVLTETSGVACGLNQK 1479
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10011.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVJ8_ECTSI1.120e-2248.76Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 53..83
e-value: 0.16
score: 21.0
coord: 16..49
e-value: 580.0
score: 6.8
coord: 89..119
e-value: 130.0
score: 11.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 53..82
score: 10.659
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 28..118
e-value: 1.2E-10
score: 41.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..124
score: 22.623
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..124
e-value: 1.3E-20
score: 76.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..124
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 57..109
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 57..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10011contigM-pyrifera_M_contig10011:3480..3854 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10011.26.1mRNA_M-pyrifera_M_contig10011.26.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10011 3480..3854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10011.26.1 ID=prot_M-pyrifera_M_contig10011.26.1|Name=mRNA_M-pyrifera_M_contig10011.26.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MQLLKAGADPTVRTPEDRPPLSVIAATASNSDSAEIVRSLLRGGAPPDAF
CMDGLFPLHIACEAGGDAGVVQALLAGGAEINSLCPGEDFLLPIHLAARS
GHTKAVRALATTAGCRLDEKANNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf