prot_M-pyrifera_M_contig112717.2642.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112717.2642.1
Unique Nameprot_M-pyrifera_M_contig112717.2642.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A6U1UND0_9EUKA (Histone H2B n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A6U1UND0_9EUKA)

HSP 1 Score: 181 bits (458), Expect = 1.410e-56
Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = 0 
Query:    4 KPASKKP--VARKTSKSASKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNS 123
            K A KKP   A   +K+  K++ D  +RKKPNTSSYS+YIYKVLKQVHPDTGIS+KAM+VMDSFVHDIFERLA+EAGRLARYN +HTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNS
Sbjct:    3 KAAGKKPRSTAEAKAKAPKKAASDKSKRKKPNTSSYSSYIYKVLKQVHPDTGISKKAMVVMDSFVHDIFERLATEAGRLARYNGKHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNS 124
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A384C8J3_URSMA (Histone H2B n=4 Tax=Carnivora TaxID=33554 RepID=A0A384C8J3_URSMA)

HSP 1 Score: 157 bits (397), Expect = 2.490e-47
Identity = 86/120 (71.67%), Postives = 98/120 (81.67%), Query Frame = 0 
Query:    5 PASKKPVARKTSKSA-SKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNS 123
            PA   P  +K SK A +K+ KDGK+RK+    SYS Y+YKVLKQVHPDTGIS KAM +M+SFV+DIFER+A EA RLA YN R TITSREIQT+VRL+LPGELAKHAVSEGTKAVTKY S
Sbjct:    4 PAKSAPAPKKGSKKAVTKAQKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS 123
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A6D2WU02_PANTR (Histone H2B n=2 Tax=Pan troglodytes TaxID=9598 RepID=A0A6D2WU02_PANTR)

HSP 1 Score: 157 bits (397), Expect = 2.570e-47
Identity = 88/122 (72.13%), Postives = 97/122 (79.51%), Query Frame = 0 
Query:    5 PASKKPVARKTSKSA--SKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSS 124
            PA   P  +K SK A      KDGK+RK+    SYS Y+YKVLKQVHPDTGIS KAM +M+SFV+DIFERLASEA RLA YN R TITSREIQT+VRL+LPGELAKHAVSEGTKAVTKY SS
Sbjct:    4 PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERLASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A2K6NGT6_RHIRO (Histone H2B n=2 Tax=Rhinopithecus TaxID=542827 RepID=A0A2K6NGT6_RHIRO)

HSP 1 Score: 157 bits (396), Expect = 3.650e-47
Identity = 87/122 (71.31%), Postives = 98/122 (80.33%), Query Frame = 0 
Query:    5 PASKKPVARKTSKSA--SKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSS 124
            PA   P  +K SK A  +   KDGK+RK+    SYS Y+YKVLKQVHPDTGIS KAM +M+SFV+DIFER+ASEA RLA YN R TITSREIQT+VRL+LPGELAKHAVSEGTKAVTKY SS
Sbjct:    4 PAKSAPAPKKGSKKAVTNAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A6B2LNY1_9EUKA (Histone H2B n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LNY1_9EUKA)

HSP 1 Score: 157 bits (397), Expect = 4.950e-47
Identity = 79/92 (85.87%), Postives = 87/92 (94.57%), Query Frame = 0 
Query:   33 NTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSS 124
            N +SYST+IYKVLKQVHPDTGIS KAM +M+SFV DIFER+A+EAGRLARYN RHTITSREIQT+VRLILPGELAKHAVSEGTKAVTKYN+S
Sbjct:   49 NYNSYSTFIYKVLKQVHPDTGISNKAMAIMNSFVADIFERIANEAGRLARYNGRHTITSREIQTAVRLILPGELAKHAVSEGTKAVTKYNNS 140
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A091EER6_FUKDA (Histone H2B n=1 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091EER6_FUKDA)

HSP 1 Score: 156 bits (395), Expect = 5.020e-47
Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 0 
Query:   10 PVARKTSKSA-SKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSS 124
            P  +K SK A +K+ KDGK+RK+    SYS Y+YKVLKQVHPDTGIS KAM +M+SFV+DIFER+A EA RLA YN R TITSREIQT+VRL+LPGELAKHAVSEGTKAVTKY SS
Sbjct:    9 PSPKKDSKKAVTKAQKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 124
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A3Q2LQZ7_HORSE (Histone H2B n=6 Tax=Boreoeutheria TaxID=1437010 RepID=A0A3Q2LQZ7_HORSE)

HSP 1 Score: 156 bits (395), Expect = 5.180e-47
Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 0 
Query:    5 PASKKPVARKTSKSA--SKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSS 124
            PA   PV +K SK A      KDGK+RK+    SYS Y+YKVLKQVHPDTGIS KAM +M+SFV+DIFER+A EA RLA YN R TITSREIQT+VRL+LPGELAKHAVSEGTKAVTKY SS
Sbjct:    4 PAKSAPVPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: H2B1F_MOUSE (Histone H2B type 1-F/J/L n=18 Tax=Euteleostomi TaxID=117571 RepID=H2B1F_MOUSE)

HSP 1 Score: 156 bits (395), Expect = 5.180e-47
Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 0 
Query:    5 PASKKPVARKTSKSA--SKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSS 124
            PA   P  +K SK A      KDGK+RK+    SYS Y+YKVLKQVHPDTGIS KAM +M+SFV+DIFER+ASEA RLA YN R TITSREIQT+VRL+LPGELAKHAVSEGTKAVTKY SS
Sbjct:    4 PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: Q8CBB6_MOUSE (Histone H2B n=8 Tax=Boreoeutheria TaxID=1437010 RepID=Q8CBB6_MOUSE)

HSP 1 Score: 156 bits (395), Expect = 6.650e-47
Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 0 
Query:    5 PASKKPVARKTSKSA--SKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSS 124
            PA   P  +K SK A      KDGK+RK+    SYS Y+YKVLKQVHPDTGIS KAM +M+SFV+DIFER+ASEA RLA YN R TITSREIQT+VRL+LPGELAKHAVSEGTKAVTKY SS
Sbjct:    4 PAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
[Close]
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Match: A0A0G4IJD9_PLABS (Histone H2B n=2 Tax=Plasmodiophoridae TaxID=37358 RepID=A0A0G4IJD9_PLABS)

HSP 1 Score: 156 bits (394), Expect = 6.700e-47
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = 0 
Query:    2 PKKPASKKPVARKTSKSASKSSKDGKRRKKPNTSSYSTYIYKVLKQVHPDTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRLILPGELAKHAVSEGTKAVTKYNSSS 125
            PKK  S    A KT+K  SK SK  K+R      SY+TYIYKVLKQVHPDTGISR+AM +M+SF++DIFER+A EAGRLARYNS+ T++SREIQTSVRLILPGELAKHAVSEGTKAVTKY  SS
Sbjct:    3 PKKAPSATKAAGKTAKQPSKGSKRHKKR----VESYATYIYKVLKQVHPDTGISRRAMSIMNSFINDIFERIALEAGRLARYNSKSTLSSREIQTSVRLILPGELAKHAVSEGTKAVTKYTQSS 122
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112717.2642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U1UND0_9EUKA1.410e-5680.33Histone H2B n=1 Tax=Vannella sp. CB-2014 TaxID=148... [more]
A0A384C8J3_URSMA2.490e-4771.67Histone H2B n=4 Tax=Carnivora TaxID=33554 RepID=A0... [more]
A0A6D2WU02_PANTR2.570e-4772.13Histone H2B n=2 Tax=Pan troglodytes TaxID=9598 Rep... [more]
A0A2K6NGT6_RHIRO3.650e-4771.31Histone H2B n=2 Tax=Rhinopithecus TaxID=542827 Rep... [more]
A0A6B2LNY1_9EUKA4.950e-4785.87Histone H2B n=1 Tax=Arcella intermedia TaxID=19638... [more]
A0A091EER6_FUKDA5.020e-4773.28Histone H2B n=1 Tax=Fukomys damarensis TaxID=88558... [more]
A0A3Q2LQZ7_HORSE5.180e-4771.31Histone H2B n=6 Tax=Boreoeutheria TaxID=1437010 Re... [more]
H2B1F_MOUSE5.180e-4771.31Histone H2B type 1-F/J/L n=18 Tax=Euteleostomi Tax... [more]
Q8CBB6_MOUSE6.650e-4771.31Histone H2B n=8 Tax=Boreoeutheria TaxID=1437010 Re... [more]
A0A0G4IJD9_PLABS6.700e-4771.77Histone H2B n=2 Tax=Plasmodiophoridae TaxID=37358 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 78..95
score: 68.99
coord: 37..55
score: 84.26
coord: 95..108
score: 86.19
coord: 56..76
score: 62.31
coord: 108..121
score: 95.85
IPR000558Histone H2BSMARTSM00427h2b3coord: 27..123
e-value: 1.7E-64
score: 230.2
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 4..124
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 92..114
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 7..100
e-value: 4.3E-20
score: 72.4
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..125
e-value: 4.1E-58
score: 196.8
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 12..124
NoneNo IPR availablePANTHERPTHR23428:SF196HISTONE H2B TYPE 1-Ncoord: 4..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112717contigM-pyrifera_M_contig112717:144..521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112717.2642.1mRNA_M-pyrifera_M_contig112717.2642.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112717 144..533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112717.2642.1 ID=prot_M-pyrifera_M_contig112717.2642.1|Name=mRNA_M-pyrifera_M_contig112717.2642.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
MPKKPASKKPVARKTSKSASKSSKDGKRRKKPNTSSYSTYIYKVLKQVHP
DTGISRKAMIVMDSFVHDIFERLASEAGRLARYNSRHTITSREIQTSVRL
ILPGELAKHAVSEGTKAVTKYNSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold