prot_M-pyrifera_M_contig112711.2640.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112711.2640.1
Unique Nameprot_M-pyrifera_M_contig112711.2640.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length60
Homology
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A7S4MNV0_9EUKA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MNV0_9EUKA)

HSP 1 Score: 103 bits (257), Expect = 1.250e-26
Identity = 47/59 (79.66%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 GGFFHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            GGFFHNPKGR EADT RAYFTQM QELG RLI  VY     APSKWW CFNKRKFMNLA
Sbjct:  114 GGFFHNPKGRQEADTVRAYFTQMRQELGVRLIELVYKNNPNAPSKWWTCFNKRKFMNLA 172          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A2P6NG12_9EUKA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NG12_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 3.840e-20
Identity = 37/57 (64.91%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 GGFFHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMN 57
            GG   NP  R E DT R Y TQ+ QE GQRL+ +VYA GD AP KWWMCFNKRKF+N
Sbjct:  113 GGIVTNPANRGETDTIRQYLTQIRQETGQRLLQKVYANGDAAPDKWWMCFNKRKFLN 169          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: L8HDC1_ACACA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDC1_ACACA)

HSP 1 Score: 83.2 bits (204), Expect = 9.280e-19
Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    2 GFFHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMN 57
            GF  NP  RAEAD  R Y TQ+ QE G RLI  VYA G+  PSKWWMCF+KRKF+N
Sbjct:  102 GFVSNPANRAEADQIRQYLTQLRQETGDRLIEAVYAFGENEPSKWWMCFSKRKFLN 157          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A0L0DQL6_THETB (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DQL6_THETB)

HSP 1 Score: 80.9 bits (198), Expect = 2.190e-17
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 GGFFHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            GGFF  P+ RAEAD  RAYFTQ+ QELG RL+  VY       SKWWMCF  RKF+N+A
Sbjct:  151 GGFFSAPESRAEADEIRAYFTQLRQELGIRLVDLVYPDETSPASKWWMCFKSRKFLNIA 209          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A1X7VJE5_AMPQE (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VJE5_AMPQE)

HSP 1 Score: 78.2 bits (191), Expect = 1.220e-16
Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    3 FFHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            F   P  RAEAD  R YFTQM QELGQRL+ +V+  GD+ PSKWW+CF KR+FM+ +
Sbjct:  116 FMSKPASRAEADQMRQYFTQMRQELGQRLVEKVFGDGDK-PSKWWICFTKRRFMDKS 171          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A6A6U253_9PEZI (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6U253_9PEZI)

HSP 1 Score: 76.3 bits (186), Expect = 8.730e-16
Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    4 FHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            F  PK R EA+  R Y  QM QEL QR +ARVYA GD APSKWW+ F KRKFMN+A
Sbjct:  134 FEPPKERNEAEVLRQYMMQMRQELAQRCLARVYADGD-APSKWWLSFKKRKFMNMA 188          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A7M5WRP1_9CNID (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WRP1_9CNID)

HSP 1 Score: 75.1 bits (183), Expect = 1.140e-15
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    7 PKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            PK R EAD  R YFTQ+ QELGQR++ +VY      PSKWWMCF KR+FM+ +
Sbjct:   95 PKDRTEADQTRMYFTQLRQELGQRILDKVYEPNTNKPSKWWMCFVKRRFMDKS 147          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A6G1GYR8_9PEZI (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1GYR8_9PEZI)

HSP 1 Score: 75.1 bits (183), Expect = 2.440e-15
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    4 FHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            F  PK R +A+T R Y  QM QELGQRL+ARVY+ GD+ PSKWW+ F KRKFM  +
Sbjct:  134 FEAPKDRQDAETLRQYIMQMRQELGQRLLARVYSEGDK-PSKWWLSFTKRKFMGKS 188          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A0D1Z9D9_9PEZI (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D1Z9D9_9PEZI)

HSP 1 Score: 75.1 bits (183), Expect = 2.490e-15
Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    4 FHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            F  PK R EA+T R Y  QM QELG RL++RVYA G   PSKWW+ F KRKFM  +
Sbjct:  134 FEGPKDRHEAETLRQYIMQMRQELGARLLSRVYADGTDKPSKWWLSFTKRKFMGKS 189          
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Match: A0A517L3J6_9PEZI (Actin-related protein 2/3 complex subunit 3 n=3 Tax=Venturia TaxID=5024 RepID=A0A517L3J6_9PEZI)

HSP 1 Score: 74.7 bits (182), Expect = 3.510e-15
Identity = 34/56 (60.71%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    4 FHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCFNKRKFMNLA 59
            F  PK R EA+T R Y  QM QELG RLI RVYA G   PSKWW+ F KRKFM  +
Sbjct:  134 FEGPKDRHEAETLRQYMMQMRQELGARLINRVYADGTDKPSKWWLSFTKRKFMGKS 189          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112711.2640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4MNV0_9EUKA1.250e-2679.66Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A2P6NG12_9EUKA3.840e-2064.91Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
L8HDC1_ACACA9.280e-1964.29Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A0L0DQL6_THETB2.190e-1761.02Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A1X7VJE5_AMPQE1.220e-1659.65Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A6A6U253_9PEZI8.730e-1664.29Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7M5WRP1_9CNID1.140e-1558.49Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A6G1GYR8_9PEZI2.440e-1560.71Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A0D1Z9D9_9PEZI2.490e-1558.93Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A517L3J6_9PEZI3.510e-1560.71Actin-related protein 2/3 complex subunit 3 n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilyGENE3D1.10.1760.10coord: 1..59
e-value: 5.4E-20
score: 73.9
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilySUPERFAMILY69060Arp2/3 complex 21 kDa subunit ARPC3coord: 2..57
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 3..57
e-value: 6.7E-20
score: 71.8
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112711contigM-pyrifera_M_contig112711:7..186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112711.2640.1mRNA_M-pyrifera_M_contig112711.2640.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112711 7..186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112711.2640.1 ID=prot_M-pyrifera_M_contig112711.2640.1|Name=mRNA_M-pyrifera_M_contig112711.2640.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=60bp
GGFFHNPKGRAEADTCRAYFTQMHQELGQRLIARVYAAGDQAPSKWWMCF
NKRKFMNLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036753ARPC3_sf
IPR007204ARPC3