mRNA_M-pyrifera_M_contig112634.2637.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A2D8LV15_9ACTN (Fe-S cluster assembly ATPase SufC n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LV15_9ACTN) HSP 1 Score: 199 bits (505), Expect = 7.270e-62 Identity = 106/128 (82.81%), Postives = 112/128 (87.50%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADPLA 384
DLSGGEKKRNETLQLGVLRP FAILDELDSGLDVDALR+VS RVE+ T+E GLGVLAITHYSRLFEQL+PDVVHVFA GRIQE+GG ELATELE TGYERWV +A A ASA LPDDPFADPLA
Sbjct: 139 DLSGGEKKRNETLQLGVLRPTFAILDELDSGLDVDALRMVSQRVEEETQEHGLGVLAITHYSRLFEQLKPDVVHVFADGRIQESGGPELATELEETGYERWV-----TAPAAASAG-LPDDPFADPLA 260
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A6B1AXW1_9ACTN (Fe-S cluster assembly ATPase SufC n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AXW1_9ACTN) HSP 1 Score: 186 bits (473), Expect = 6.090e-57 Identity = 97/124 (78.23%), Postives = 103/124 (83.06%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFA 372
DLSGGEKKRNETLQLGVLRPRFAILDELDSGLD DALRLV RVE ATEED +GVLAITHYSRLFEQLRPD VHVFA GRIQ+TGGAELA ELE TGYERW + P+ S + L +DPFA
Sbjct: 139 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDFDALRLVGARVEAATEEDSVGVLAITHYSRLFEQLRPDTVHVFAGGRIQQTGGAELAQELEDTGYERWSDSPPPTT----SGSKLGEDPFA 258
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A6B0WJL6_9ACTN (Fe-S cluster assembly ATPase SufC n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WJL6_9ACTN) HSP 1 Score: 172 bits (436), Expect = 2.460e-51 Identity = 89/126 (70.63%), Postives = 101/126 (80.16%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADP 378
DLSGGE+KRNE LQLGVL+P FA++DELDSGLDVDALRLV+GR+E+ATE DGLGVLAITHYSR+F LRPD VHVFA GRIQE+GG+ELA ELE+ GYERW A P + A A PF DP
Sbjct: 138 DLSGGERKRNEALQLGVLKPAFAVIDELDSGLDVDALRLVAGRIEEATEHDGLGVLAITHYSRVFAHLRPDSVHVFAGGRIQESGGSELADELEAEGYERWTGTA-PQPDPDAGAT-----PFTDP 257
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A7V9SPE2_9ACTN (Fe-S cluster assembly ATPase SufC n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9SPE2_9ACTN) HSP 1 Score: 170 bits (431), Expect = 1.180e-50 Identity = 92/128 (71.88%), Postives = 98/128 (76.56%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADPLA 384
DLSGGE+KRNETLQLGVLRPRFAILDELDSGLDVDALR V+ R+E AT ED LGVLAITHYSRL +LRPDVVHV A GRI TGG ELA ELE TGY +VEP + A DDPFADP A
Sbjct: 140 DLSGGERKRNETLQLGVLRPRFAILDELDSGLDVDALRDVARRIEAATHEDNLGVLAITHYSRLLTELRPDVVHVLAGGRIVATGGPELAQELEETGYAGYVEPDPTAIRGGA------DDPFADPFA 261
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A6I3BZ12_9ACTN (Fe-S cluster assembly ATPase SufC n=2 Tax=root TaxID=1 RepID=A0A6I3BZ12_9ACTN) HSP 1 Score: 169 bits (428), Expect = 3.760e-50 Identity = 89/128 (69.53%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADPLA 384
D SGGEKKRNETLQL VL+P+FAILDELDSGLDVDALRL S RVE AT E GLGVLAITHY RL ++LRPD VHV A G IQ TGG ELA ELE TGY +W+E + S A DDPFADP A
Sbjct: 140 DFSGGEKKRNETLQLAVLQPKFAILDELDSGLDVDALRLCSRRVEAATHETGLGVLAITHYKRLLDELRPDFVHVLAKGAIQVTGGLELAEELERTGYSQWIE--RDTVETSVSIAGFGDDPFADPFA 265
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A6B1EET4_9ACTN (Fe-S cluster assembly ATPase SufC n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EET4_9ACTN) HSP 1 Score: 167 bits (424), Expect = 1.510e-49 Identity = 87/127 (68.50%), Postives = 99/127 (77.95%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADPL 381
DLSGGE+KRNE LQLGVL+P FA++DELDSGLDVDALR V R+E ATE DGLGVLAITH SR+F+ LRPD VHVFA GRIQE+GG ELA ELE+ GYERW+ PAS +A A+ PF DP
Sbjct: 138 DLSGGERKRNEALQLGVLKPAFAVVDELDSGLDVDALRFVGDRIEDATEHDGLGVLAITHSSRVFDHLRPDAVHVFAGGRIQESGGPELAEELEADGYERWM-PASSKPDAGAA-------PFTDPF 256
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A6I3FC23_9ACTN (Fe-S cluster assembly ATPase SufC n=2 Tax=root TaxID=1 RepID=A0A6I3FC23_9ACTN) HSP 1 Score: 164 bits (416), Expect = 2.180e-48 Identity = 90/131 (68.70%), Postives = 99/131 (75.57%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWV---EPASPSANAKASAATLPDDPFADPLA 384
DLSGGEKKRNET+QL VLRPRFAILDELDSGLDVDALR S RVE+AT E LGVLAITHY+RL E+L+PDVVH+ A GRI +GG ELA ELE TGY +WV E A+PS A DPFADP A
Sbjct: 140 DLSGGEKKRNETMQLAVLRPRFAILDELDSGLDVDALRACSRRVEEATTEFNLGVLAITHYTRLLEELKPDVVHILANGRIVTSGGPELADELEETGYAQWVTDDEIAAPSGEA---------DPFADPFA 261
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A538JD45_9ACTN (Fe-S cluster assembly ATPase SufC n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JD45_9ACTN) HSP 1 Score: 164 bits (416), Expect = 2.570e-48 Identity = 85/128 (66.41%), Postives = 98/128 (76.56%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADPLA 384
DLSGGE+KRNETLQLGVLRP+ AILDE+DSGLD+DALR V+ RVE AT+E LGVLAITHY R+ +L+PDVVHV GRI TGG ELA ELE TGYE + + + ASA T +DPFADPLA
Sbjct: 140 DLSGGERKRNETLQLGVLRPKIAILDEIDSGLDIDALRAVARRVEAATKEIDLGVLAITHYRRILGELKPDVVHVLRGGRILATGGPELADELEHTGYEGYEDDTDAETDRAASAGTTAEDPFADPLA 267
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: UPI001AA052C6 (Fe-S cluster assembly ATPase SufC n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA052C6) HSP 1 Score: 162 bits (410), Expect = 2.010e-47 Identity = 90/128 (70.31%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADPLA 384
DLSGGEKKR+ETLQLGVLRPRFAILDELDSGLDVDALR + RVE AT E LGVLAITHYSRL +LRPDVVHV A GRIQ TGG ELA ELE TGY + E + + A DPFADPLA
Sbjct: 140 DLSGGEKKRSETLQLGVLRPRFAILDELDSGLDVDALRACARRVESATTEFDLGVLAITHYSRLLNELRPDVVHVLARGRIQATGGPELAAELERTGYAAYGETDQEDPSGRRGPAGN-GDPFADPLA 266
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Match: A0A6J6XNL1_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6XNL1_9ZZZZ) HSP 1 Score: 160 bits (405), Expect = 2.250e-47 Identity = 87/128 (67.97%), Postives = 93/128 (72.66%), Query Frame = 1
Query: 1 DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEDGLGVLAITHYSRLFEQLRPDVVHVFAAGRIQETGGAELATELESTGYERWVEPASPSANAKASAATLPDDPFADPLA 384
DLSGGEKKRNET+QL VLRP+FAILDELDSGLDVDALR S RVE AT E LGVLAITHYSRL E+L+PDVVHV A GRI GG ELA ELE TGY W + +P A A DPFA P A
Sbjct: 91 DLSGGEKKRNETMQLAVLRPKFAILDELDSGLDVDALRACSRRVEAATTEFNLGVLAITHYSRLLEELKPDVVHVLAQGRIVAAGGPELADELERTGYAEWADDEAPPAAA---------DPFAAPFA 209 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112634.2637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig112634.2637.1 >prot_M-pyrifera_M_contig112634.2637.1 ID=prot_M-pyrifera_M_contig112634.2637.1|Name=mRNA_M-pyrifera_M_contig112634.2637.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp DLSGGEKKRNETLQLGVLRPRFAILDELDSGLDVDALRLVSGRVEQATEEback to top mRNA from alignment at M-pyrifera_M_contig112634:1..387+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig112634.2637.1 ID=mRNA_M-pyrifera_M_contig112634.2637.1|Name=mRNA_M-pyrifera_M_contig112634.2637.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig112634:1..387+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig112634:1..387+ >mRNA_M-pyrifera_M_contig112634.2637.1 ID=mRNA_M-pyrifera_M_contig112634.2637.1|Name=mRNA_M-pyrifera_M_contig112634.2637.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig112634:1..387+ (Macrocystis pyrifera P11B4 male)back to top |