prot_M-pyrifera_M_contig112618.2633.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112618.2633.1
Unique Nameprot_M-pyrifera_M_contig112618.2633.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
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BLAST of mRNA_M-pyrifera_M_contig112618.2633.1 vs. uniprot
Match: UPI00140DFBD8 (immunoglobulin domain-containing protein n=1 Tax=Perlabentimonas gracilis TaxID=2715279 RepID=UPI00140DFBD8)

HSP 1 Score: 58.5 bits (140), Expect = 1.100e-7
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 0 
Query:    7 LLFLMIHVVSISEAQDFSLNNYTGDWNDTNSWNSGTIPANDDMDENLTINGYITLQTGVLEFTNGG-----GETLIINDTLVVASAGTSRLRGGNTITVNGLLVIAGDLN 111
            +L L + +VS       S +NYTG WND+NSW  GTIP + +   ++ I+G+ITLQ G L F+         +TLIIN  L + +     +  G  + V G + +A  +N
Sbjct:   13 ILALALALVSFGVFSQTSKDNYTGLWNDSNSWVGGTIPNSANPQNSVYIDGFITLQ-GNLTFSKNNVNLYVRDTLIINGDLTLGNNNDLSIFDGGVLIVTGSVFVANQVN 121
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112618.2633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00140DFBD81.100e-735.45immunoglobulin domain-containing protein n=1 Tax=P... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..111
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.872

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112618contigM-pyrifera_M_contig112618:232..564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112618.2633.1mRNA_M-pyrifera_M_contig112618.2633.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112618 232..564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112618.2633.1 ID=prot_M-pyrifera_M_contig112618.2633.1|Name=mRNA_M-pyrifera_M_contig112618.2633.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
MRTYFILLFLMIHVVSISEAQDFSLNNYTGDWNDTNSWNSGTIPANDDMD
ENLTINGYITLQTGVLEFTNGGGETLIINDTLVVASAGTSRLRGGNTITV
NGLLVIAGDLN
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