mRNA_M-pyrifera_M_contig101246.263.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101246.263.1
Unique NamemRNA_M-pyrifera_M_contig101246.263.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: A0A5D6Y108_9STRA (Purple acid phosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y108_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.520e-25
Identity = 60/149 (40.27%), Postives = 79/149 (53.02%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQGT--VHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQALYQSNHNFPQHNLR 441
            TPWLFV +HRP Y SE    DY +SL LR  +E LL +Y VD + +GHYH+Y+RT PV+  Q    E        VHI  G+ G   DT  +Y R W        F Y R    NA+HL F+ +++      D A   SNH++P   +R
Sbjct:  411 TPWLFVHIHRPLYCSETYEDDYRLSLLLRNHLEALLNEYRVDVVFSGHYHAYERTCPVYDEQCFHGEQPDVALAPVHIMVGSGGAKVDTEGYYGRDWSLAALRE-FGYGRVHVHNASHLQFEFVANALAGVKDAAWIVSNHSWPNVRVR 558          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: K3WU61_GLOUD (Purple acid phosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU61_GLOUD)

HSP 1 Score: 108 bits (271), Expect = 9.100e-25
Identity = 63/160 (39.38%), Postives = 84/160 (52.50%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVF------QNQTA-------GAENDPQGTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQALYQSNHNFPQHNLR 441
            TPWLF+ VHRP Y SE    DY  SL LR  +E LL  + +D + +GHYHSY+RT PVF      +N T+       GA +     VHI  G+ G   D  ++Y   W RK     + Y R    NA+HL F+ +S T+ +  D     SNHN+P   +R
Sbjct:  485 TPWLFLHVHRPFYCSETYERDYRRSLLLRNQMEHLLGLFRIDIVFSGHYHSYERTCPVFDEACYYENATSTRDDKSFGAISSVSAPVHIMVGSGGASVDDESYYSVDWSRKVLQD-YGYGRVHVYNASHLHFEFVSDTSEAVKDSVWIVSNHNWPNSRVR 643          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: A0A8K1FFT7_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFT7_PYTOL)

HSP 1 Score: 101 bits (252), Expect = 3.420e-22
Identity = 56/148 (37.84%), Postives = 77/148 (52.03%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAEN-DPQGTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQALYQSNHNFPQHNLR 441
            TPWLFV +HR  Y S     DY  SL  R  +E L  +Y VD + +GHYHSY+RT PV+       EN + +  VHI  G+ G   DT   Y   W  +     + Y R    NATH+ F+ +++  G   D+A   S+H++P   LR
Sbjct:  509 TPWLFVHIHRSLYCSVAFNGDYERSLLFRDHLEALFAEYHVDVVFSGHYHSYERTCPVYDEACYYGENGEAEAPVHIMVGSGGANVDTFGHYSVGWS-EFARMAYGYGRVHVHNATHMHFEFVANDVGDVQDEAWIVSSHDWPSDRLR 655          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: A0A329S8J8_9STRA (Purple acid phosphatase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S8J8_9STRA)

HSP 1 Score: 100 bits (250), Expect = 6.300e-22
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQGTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQALYQSNHNF 423
            TPWL V +HRP Y SE    D++V+  LR  +E LL   +VDF+ +GHYH+Y++T PVFQ++    E   Q   HI  G+ G   D  +++Q  W R      + + R    NA+H  F+ + + +    D     SNHN+
Sbjct:  537 TPWLIVHLHRPLYCSESYEGDHVVAKLLRGCLEDLLAANNVDFVFSGHYHAYEQTCPVFQDECREQEGTAQAPTHIMIGSGGAELDDVSYFQANWSRSRQQE-YGHGRLHIYNASHAHFEFVRARDRVVTDAVWVVSNHNW 676          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: UPI000F557438 (probable inactive purple acid phosphatase 2 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F557438)

HSP 1 Score: 100 bits (248), Expect = 1.090e-21
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQGTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQ 396
            TPW+ +  HR  Y+S+++  DY+VSL ++ A++ LL KY VD     HYHSY+RT PV+Q Q       P   VHI  GTAG   DT +++  +W   H    + Y R    N + L ++ + +T+G   DQ
Sbjct:  456 TPWVAIVGHRAMYSSQKEEVDYIVSLGMQHALDSLLYKYKVDLAFWAHYHSYERTCPVYQRQCT-----PGAPVHIVVGTAGKELDTEDYFPASWSLYHERD-YGYGRLTQANRSALLWEWVQNTSGKVKDQ 581          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: UPI000C04217B (probable inactive purple acid phosphatase 2 isoform X1 n=3 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04217B)

HSP 1 Score: 100 bits (248), Expect = 1.100e-21
Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQGTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLD 393
            TPWL +A HR  Y S++   DY+VSL L+ A++ LL KY VD     HYHSY+RT PV+Q+Q       P   VHI  GTAG   DT +++  +W   H    + Y R    N + L ++ + +T+G   D
Sbjct:  463 TPWLVIAGHRAMYTSQKVEVDYIVSLGLQLALDSLLYKYKVDLAFWAHYHSYERTCPVYQHQCT-----PGAPVHIVVGTAGKELDTEDYFPVSWSLYH-ENDYGYGRLTQANRSALLWEWVENTSGKVKD 587          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: A0A3M6TYY5_POCDA (Purple acid phosphatase n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TYY5_POCDA)

HSP 1 Score: 100 bits (248), Expect = 1.240e-21
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQGTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQ 396
            TPW+ +  HR  Y+S+++  DY+VSL ++ A++ LL KY VD     HYHSY+RT PV+Q Q       P   VHI  GTAG   DT +++  +W   H    + Y R    N + L ++ + +T+G   DQ
Sbjct: 1018 TPWVAIVGHRAMYSSQKEEVDYIVSLGMQHALDSLLYKYKVDLAFWAHYHSYERTCPVYQRQCT-----PGAPVHIVVGTAGKELDTEDYFPASWSLYHERD-YGYGRLTQANRSALLWEWVQNTSGKVKDQ 1143          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: UPI000C048E7B (probable inactive purple acid phosphatase 27 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C048E7B)

HSP 1 Score: 95.1 bits (235), Expect = 5.540e-21
Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQGTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLD 393
            TPW+ +A HR  Y S+++  DY+VSL ++ A + LL KY VD     HYHSY+RT PV+Q Q       P   VHI  GTAG   D   ++  +W   H    + Y R    N + L ++ + +T+G   D
Sbjct:  135 TPWVVIAGHRAMYTSQKEEWDYIVSLGMQHAFDSLLYKYKVDLAFWAHYHSYERTCPVYQRQCT-----PGAPVHIVVGTAGKELDLEEYFPVSWSLYH-ENDYGYGRLTQANRSALLWEWVENTSGKVKD 259          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: A0A833SQJ2_PHYIN (Iron/zinc purple acid phosphatase-like protein C n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQJ2_PHYIN)

HSP 1 Score: 95.1 bits (235), Expect = 9.760e-21
Identity = 55/152 (36.18%), Postives = 75/152 (49.34%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQGT----VHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQALYQSNHNFPQHNLRH 444
            TPW+FV +HRP Y S     DY  SL  R  +E  L  Y VD + AGHYHSY+RT PVF N+       P G     VH+  G+ G   D   +Y+  W  + +     Y R    N+THL F+ +S+      D+    S H++P    R+
Sbjct:  102 TPWVFVYIHRPLYCSVAYSGDYYRSLLFRDELEQELADYHVDVVFAGHYHSYERTCPVFGNRCI---ESPSGKAMAPVHLMIGSGGYQVDDAGFYRSRWREQGFLE-HGYGRVHIYNSTHLHFEFVSNLERQVKDETWIVSTHDWPSKRERY 249          
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Match: A0A662Y8Z6_9STRA (Purple acid phosphatase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8Z6_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.870e-21
Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = 1
Query:    1 TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYHSYQRTAPVFQNQTAGAENDPQ-GTVHITAGTAGIGFDTPNWYQRAWDRKHYATVFAYTRFDALNATHLAFKLISSTNGSTLDQALYQSNHNFPQHNLRH 444
            TPWLFV +HRP Y S     DY  SL  R  +E  L  Y VD + +GHYHSY+RT PVF ++   + N+     VH+  G+ G   D   +Y+  W  + +     Y R    NA+HL F+ +S+      D     S HN+P +  R+
Sbjct:  412 TPWLFVYIHRPLYCSVAYSGDYYRSLMFRDELEQELADYHVDVVFSGHYHSYERTCPVFGDRCIESPNNKALAPVHLMVGSGGYKVDDAGFYRSRWREQGFLE-HGYGRVHIYNASHLHFEFVSNIQRGVKDDVWIISTHNWPSNRERY 559          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101246.263.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5D6Y108_9STRA6.520e-2540.27Purple acid phosphatase n=1 Tax=Pythium brassicum ... [more]
K3WU61_GLOUD9.100e-2539.38Purple acid phosphatase n=1 Tax=Globisporangium ul... [more]
A0A8K1FFT7_PYTOL3.420e-2237.84Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
A0A329S8J8_9STRA6.300e-2236.17Purple acid phosphatase n=2 Tax=Phytophthora TaxID... [more]
UPI000F5574381.090e-2137.88probable inactive purple acid phosphatase 2 n=1 Ta... [more]
UPI000C04217B1.100e-2139.69probable inactive purple acid phosphatase 2 isofor... [more]
A0A3M6TYY5_POCDA1.240e-2137.88Purple acid phosphatase n=1 Tax=Pocillopora damico... [more]
UPI000C048E7B5.540e-2137.40probable inactive purple acid phosphatase 27 n=1 T... [more]
A0A833SQJ2_PHYIN9.760e-2136.18Iron/zinc purple acid phosphatase-like protein C n... [more]
A0A662Y8Z6_9STRA9.870e-2136.24Purple acid phosphatase (Fragment) n=1 Tax=Nothoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101246contigM-pyrifera_M_contig101246:218..664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.4
Seed ortholog evalue1.5e-21
Seed eggNOG ortholog65071.PYU1_T008508
KEGG koko:K22390
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003993,GO:0005048,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005768,GO:0005794,GO:0005802,GO:0006109,GO:0006605,GO:0006626,GO:0006793,GO:0006796,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0008104,GO:0008150,GO:0008152,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017038,GO:0019222,GO:0030943,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0031984,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042578,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044431,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045040,GO:0045184,GO:0046907,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061024,GO:0065007,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072655,GO:0072657,GO:0080090,GO:0090150,GO:0090151,GO:0097708,GO:0098791
EggNOG free text desc.Iron/zinc purple acid phosphatase-like protein C
EggNOG OGs1MDEX@121069,COG1409@1,KOG1378@2759
COG Functional cat.G
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size447
Cds size447
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815509.999051-CDS-M-pyrifera_M_contig101246:217..6641622815509.999051-CDS-M-pyrifera_M_contig101246:217..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101246 218..664 -
1692277443.8887115-CDS-M-pyrifera_M_contig101246:217..6641692277443.8887115-CDS-M-pyrifera_M_contig101246:217..664Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101246 218..664 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101246.263.1prot_M-pyrifera_M_contig101246.263.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101246 218..664 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101246.263.1

>prot_M-pyrifera_M_contig101246.263.1 ID=prot_M-pyrifera_M_contig101246.263.1|Name=mRNA_M-pyrifera_M_contig101246.263.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
TPWLFVAVHRPAYNSEEDRPDYLVSLHLRTAIEPLLQKYSVDFLLAGHYH
SYQRTAPVFQNQTAGAENDPQGTVHITAGTAGIGFDTPNWYQRAWDRKHY
ATVFAYTRFDALNATHLAFKLISSTNGSTLDQALYQSNHNFPQHNLRH*
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mRNA from alignment at M-pyrifera_M_contig101246:218..664-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101246.263.1 ID=mRNA_M-pyrifera_M_contig101246.263.1|Name=mRNA_M-pyrifera_M_contig101246.263.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig101246:218..664- (Macrocystis pyrifera P11B4 male)
ACACCCTGGCTCTTCGTCGCAGTCCACAGACCAGCCTACAATTCGGAAGA GGACCGGCCAGATTACCTCGTGTCCCTCCACCTCCGCACGGCAATCGAAC CGCTCCTCCAGAAATACAGCGTCGACTTTCTCCTCGCCGGTCACTACCAC TCGTACCAACGCACCGCACCAGTGTTCCAGAACCAAACAGCCGGCGCTGA GAATGACCCGCAAGGCACCGTGCACATCACAGCCGGCACCGCAGGCATCG GATTCGACACCCCAAACTGGTACCAGCGCGCGTGGGACAGAAAACACTAC GCCACTGTCTTCGCATATACCAGGTTCGACGCGCTCAACGCCACCCACCT CGCCTTCAAACTCATATCCTCCACCAACGGATCCACTCTCGACCAAGCGC TCTACCAGTCCAACCACAACTTCCCGCAACACAACCTCAGACACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101246:218..664-

>mRNA_M-pyrifera_M_contig101246.263.1 ID=mRNA_M-pyrifera_M_contig101246.263.1|Name=mRNA_M-pyrifera_M_contig101246.263.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig101246:218..664- (Macrocystis pyrifera P11B4 male)
ACACCCTGGCTCTTCGTCGCAGTCCACAGACCAGCCTACAATTCGGAAGA
GGACCGGCCAGATTACCTCGTGTCCCTCCACCTCCGCACGGCAATCGAAC
CGCTCCTCCAGAAATACAGCGTCGACTTTCTCCTCGCCGGTCACTACCAC
TCGTACCAACGCACCGCACCAGTGTTCCAGAACCAAACAGCCGGCGCTGA
GAATGACCCGCAAGGCACCGTGCACATCACAGCCGGCACCGCAGGCATCG
GATTCGACACCCCAAACTGGTACCAGCGCGCGTGGGACAGAAAACACTAC
GCCACTGTCTTCGCATATACCAGGTTCGACGCGCTCAACGCCACCCACCT
CGCCTTCAAACTCATATCCTCCACCAACGGATCCACTCTCGACCAAGCGC
TCTACCAGTCCAACCACAACTTCCCGCAACACAACCTCAGACACTGAACA
CCCTGGCTCTTCGTCGCAGTCCACAGACCAGCCTACAATTCGGAAGAGGA
CCGGCCAGATTACCTCGTGTCCCTCCACCTCCGCACGGCAATCGAACCGC
TCCTCCAGAAATACAGCGTCGACTTTCTCCTCGCCGGTCACTACCACTCG
TACCAACGCACCGCACCAGTGTTCCAGAACCAAACAGCCGGCGCTGAGAA
TGACCCGCAAGGCACCGTGCACATCACAGCCGGCACCGCAGGCATCGGAT
TCGACACCCCAAACTGGTACCAGCGCGCGTGGGACAGAAAACACTACGCC
ACTGTCTTCGCATATACCAGGTTCGACGCGCTCAACGCCACCCACCTCGC
CTTCAAACTCATATCCTCCACCAACGGATCCACTCTCGACCAAGCGCTCT
ACCAGTCCAACCACAACTTCCCGCAACACAACCTCAGACACTGA
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