prot_M-pyrifera_M_contig112605.2629.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112605.2629.1
Unique Nameprot_M-pyrifera_M_contig112605.2629.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length185
Homology
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A2D8GHV7_9ACTN (Peptide chain release factor 1 n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GHV7_9ACTN)

HSP 1 Score: 296 bits (757), Expect = 7.980e-98
Identity = 148/185 (80.00%), Postives = 174/185 (94.05%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            M+E++AKRQGWR E++ +S SDLGGFSEVT +LSGDAVWTRMKHEAGTHRVQRVPVTESQGR+HTSSAT++ +PEA+EVE++++DNDLRIDTYR+SG GGQSVNTMDSAVRITH+PTGV VSMQDEKSQLKNK+KA+RVL+SRLL +EQEKA+AEA+ LR SQV +GDRSEKIRTYN+KENRVTD
Sbjct:  132 MFESFAKRQGWRMEVMSASHSDLGGFSEVTAMLSGDAVWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVLVIPEADEVEIEVDDNDLRIDTYRASGPGGQSVNTMDSAVRITHLPTGVVVSMQDEKSQLKNKDKALRVLKSRLLQLEQEKADAEAAALRGSQVGSGDRSEKIRTYNYKENRVTD 316          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A7X5WNC7_9ACTN (Peptide chain release factor 1 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WNC7_9ACTN)

HSP 1 Score: 294 bits (753), Expect = 3.220e-97
Identity = 150/185 (81.08%), Postives = 171/185 (92.43%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MY+A+AKR GW  E+L +SPS+LGG++EVT LLSGD+VWTRMKHEAGTHRVQRVPVTESQGR+HTSSAT++ LPEA+EV+VDI+DNDLRIDT+R+SG GGQSVNT DSAVRITHVPTGV VSMQDEKSQLKNK+KA+RVLRSRLL +EQEKA AEA+DLR  QV +GDRSEKIRTYNFKENRVTD
Sbjct:  132 MYDAFAKRMGWTLEVLSTSPSELGGYAEVTALLSGDSVWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVIVLPEADEVDVDIDDNDLRIDTFRASGPGGQSVNTTDSAVRITHVPTGVVVSMQDEKSQLKNKSKALRVLRSRLLQMEQEKAAAEAADLRKGQVGSGDRSEKIRTYNFKENRVTD 316          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A6B1B021_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B021_9ACTN)

HSP 1 Score: 289 bits (739), Expect = 4.280e-95
Identity = 148/185 (80.00%), Postives = 167/185 (90.27%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MYE++AKR  WR E+L SSP++LGG SEVT LL+GD+VWTRMKHEAGTHRVQRVPVTESQGR+HTSSAT+M LPE EEVEV I+DNDLR+DTYR+SG GGQSVNTMDSAVRI H PTG+ V+MQDEKSQLKNKNKAMRVLR+RL  +EQE+A+AEASDLR  QVS GDRSEKIRTYNFKENR+TD
Sbjct:  132 MYESFAKRMNWRMELLSSSPTELGGLSEVTALLAGDSVWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVMVLPEPEEVEVHIDDNDLRVDTYRASGHGGQSVNTMDSAVRIVHEPTGLVVTMQDEKSQLKNKNKAMRVLRARLGQLEQERADAEASDLRRGQVSMGDRSEKIRTYNFKENRLTD 316          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A7Y2DBY0_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DBY0_9ACTN)

HSP 1 Score: 265 bits (678), Expect = 8.150e-86
Identity = 133/185 (71.89%), Postives = 159/185 (85.95%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            M+  +AKRQGW  E++GS PSD+GGF+++T +L GDAVWTRMK E GTHRVQRVPVTESQGR+HTSSAT+  LPEA+EVEV++++NDL++D YRSSG GGQSVNT DSAVRITH PTG+TVSMQDEKSQ++NK KA+RVLR+RLL  E+E+  AE S  R  QV +GDRSEKIRTYNFKENRVTD
Sbjct:  135 MFTTFAKRQGWGLEVMGSHPSDMGGFTDITFVLKGDAVWTRMKFEGGTHRVQRVPVTESQGRVHTSSATVTVLPEADEVEVEVDENDLQVDYYRSSGPGGQSVNTTDSAVRITHKPTGITVSMQDEKSQIQNKAKALRVLRARLLKAEEERQQAELSAARKDQVKSGDRSEKIRTYNFKENRVTD 319          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: UPI001F39A174 (peptide chain release factor 1 n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F39A174)

HSP 1 Score: 262 bits (669), Expect = 2.050e-84
Identity = 135/185 (72.97%), Postives = 156/185 (84.32%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MY AYA R GW  E+LGSSPSDLGGF+EVT LL G  VW+RMKHEAG HRVQRVPVTESQGRIHTSSAT+  +PEA+E++V+I+ NDL++D +RSSG GGQSVNT DSAVRITH PTG+ VSMQDEKSQL+N+ KAM+VLR+RLL  EQE+ +AE S  R SQ+  G RSEKIRTYNFKENRVTD
Sbjct:  135 MYRAYAARMGWSLEVLGSSPSDLGGFAEVTFLLRGPGVWSRMKHEAGPHRVQRVPVTESQGRIHTSSATVTVMPEADEIDVEIDPNDLQVDVFRSSGPGGQSVNTTDSAVRITHKPTGIVVSMQDEKSQLQNRAKAMQVLRARLLQREQERQHAEQSSARKSQIGGGGRSEKIRTYNFKENRVTD 319          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A359F3Z0_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F3Z0_9ACTN)

HSP 1 Score: 261 bits (667), Expect = 3.540e-84
Identity = 135/185 (72.97%), Postives = 157/185 (84.86%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MY+ +A RQGW+ E+LGSSPSDLGG+SE++ LL G+  W+RMKHEAG HRVQRVPVTESQGRIHTSSAT+   PEAEEV+V+I+ NDL+ID YRSSG GGQSVNT DSAVRITH PTGVTVSMQDEKSQ++N+ KAM VLRSR+L  EQ++  AE SD R SQ+  G RSEKIRTYNFKENRV+D
Sbjct:  132 MYQGFAARQGWKLEVLGSSPSDLGGYSEISFLLKGEGAWSRMKHEAGPHRVQRVPVTESQGRIHTSSATVTVSPEAEEVDVEIDLNDLQIDYYRSSGPGGQSVNTTDSAVRITHKPTGVTVSMQDEKSQIQNRAKAMLVLRSRMLKAEQDRVAAEQSDARKSQIGGGGRSEKIRTYNFKENRVSD 316          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A6N8YBR8_9ACTN (Peptide chain release factor 1 n=11 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N8YBR8_9ACTN)

HSP 1 Score: 260 bits (664), Expect = 1.040e-83
Identity = 133/185 (71.89%), Postives = 160/185 (86.49%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MY+A+AKR+ W+ E L +SPSDLGG++EV+ L+SGD  WTRMKHEAGTHRVQRVPVTESQGR+HTSSAT+  LPEAEEV+V I+D +L++D +RSSG GGQSVNT DSAVRITH+P+G+ V+MQDEKSQL+NK KA+RVLRSRLL  EQ++A+AE S +R  QV  GDRSEKIRTYN KENRVTD
Sbjct:  132 MYQAFAKRRRWKLEPLAASPSDLGGYTEVSGLISGDQAWTRMKHEAGTHRVQRVPVTESQGRVHTSSATVSVLPEAEEVDVRIDDAELQVDVFRSSGPGGQSVNTTDSAVRITHLPSGLVVAMQDEKSQLQNKQKALRVLRSRLLQAEQDRASAEQSAMRRGQVGGGDRSEKIRTYNMKENRVTD 316          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A7X7HTT3_9ACTN (Peptide chain release factor 1 n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7HTT3_9ACTN)

HSP 1 Score: 259 bits (661), Expect = 2.780e-83
Identity = 130/185 (70.27%), Postives = 157/185 (84.86%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MY+ YA+RQGW+ E+L + PSD+GG++EVT L+SGD  WTR+KHE G HRVQRVP TESQGRIHTSSAT+  LPEAEEV+V+I+ NDL++D YRSSG GGQSVNT DSAVR+TH PTGVTVSMQD+KSQL+NK KAM+VLRSRLL +EQ++  +E S+ R  QV  G RSEK+RTYNFKENRV+D
Sbjct:  132 MYQGYAQRQGWKTEVLNADPSDMGGYNEVTFLVSGDGAWTRLKHEGGPHRVQRVPATESQGRIHTSSATVTVLPEAEEVDVEIDANDLQVDYYRSSGPGGQSVNTTDSAVRLTHKPTGVTVSMQDQKSQLQNKAKAMQVLRSRLLKLEQDRQQSELSEARKDQVGGGGRSEKVRTYNFKENRVSD 316          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: UPI001E392D8B (peptide chain release factor 1 n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E392D8B)

HSP 1 Score: 259 bits (661), Expect = 2.950e-83
Identity = 133/185 (71.89%), Postives = 155/185 (83.78%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MY A+A R GWRFE++ +  SDLGG+S++T  L+GD VWTRMKHE G HRVQRVPVTESQGRIHTSSAT+  LPEA+EV+V I+ NDLRID YRSSG GGQSVNT DSAVRITH+PTGV V+MQDEKSQ++N+ KA+RVLRSRLL  EQE+  +EAS  R +QV  G RSEK+RTYNFKENRVTD
Sbjct:  134 MYRAFAARMGWRFEIMDAQESDLGGYSDITFRLAGDGVWTRMKHEGGPHRVQRVPVTESQGRIHTSSATVTVLPEADEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVAMQDEKSQIQNREKALRVLRSRLLQAEQERQASEASGARRAQVGGGGRSEKVRTYNFKENRVTD 318          
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Match: A0A3M2GBL2_ACTSX (Peptide chain release factor 1 n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GBL2_ACTSX)

HSP 1 Score: 259 bits (661), Expect = 3.650e-83
Identity = 130/185 (70.27%), Postives = 159/185 (85.95%), Query Frame = 0
Query:    1 MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHRVQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGGQSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQEKANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD 185
            MY AYA+R+GW  E+L +SPSDLGG+SE++  + G+ VW+R++HEAGTHRVQRVPVTESQGRIHTSSAT+  LPEA+E+EVDI+D DLRI+ +R+SG GGQSVNT DSAVR+TH+PTG+TVSMQDEKSQL+N+ KA+RVLR+RLL   +E+A AE S LR  Q+  GDRSEKIRTYN KENRVTD
Sbjct:  132 MYSAYARRKGWTLEVLSASPSDLGGYSEISAAVRGEGVWSRLRHEAGTHRVQRVPVTESQGRIHTSSATVSVLPEADEIEVDIDDADLRIEVFRASGPGGQSVNTTDSAVRVTHLPTGITVSMQDEKSQLQNRQKALRVLRARLLQRAEEEAAAEMSALRRDQIGGGDRSEKIRTYNVKENRVTD 316          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112605.2629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8GHV7_9ACTN7.980e-9880.00Peptide chain release factor 1 n=5 Tax=Acidimicrob... [more]
A0A7X5WNC7_9ACTN3.220e-9781.08Peptide chain release factor 1 n=1 Tax=Actinomycet... [more]
A0A6B1B021_9ACTN4.280e-9580.00Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
A0A7Y2DBY0_9ACTN8.150e-8671.89Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
UPI001F39A1742.050e-8472.97peptide chain release factor 1 n=1 Tax=Rhabdotherm... [more]
A0A359F3Z0_9ACTN3.540e-8472.97Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
A0A6N8YBR8_9ACTN1.040e-8371.89Peptide chain release factor 1 n=11 Tax=Acidimicro... [more]
A0A7X7HTT3_9ACTN2.780e-8370.27Peptide chain release factor 1 n=1 Tax=Acidimicrob... [more]
UPI001E392D8B2.950e-8371.89peptide chain release factor 1 n=1 Tax=Rhabdotherm... [more]
A0A3M2GBL2_ACTSX3.650e-8370.27Peptide chain release factor 1 n=1 Tax=Actinomyces... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..157
NoneNo IPR availableGENE3D3.30.70.1660coord: 1..96
e-value: 2.9E-27
score: 97.2
NoneNo IPR availableGENE3D3.30.70.1660coord: 97..185
e-value: 4.3E-11
score: 44.7
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 1..185
NoneNo IPR availablePANTHERPTHR43804:SF7PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATEDcoord: 1..185
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 1..185
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 78..185
e-value: 1.2E-37
score: 128.3
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 94..110
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 1..69
e-value: 1.1E-26
score: 94.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112605contigM-pyrifera_M_contig112605:29..583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112605.2629.1mRNA_M-pyrifera_M_contig112605.2629.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112605 2..583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112605.2629.1 ID=prot_M-pyrifera_M_contig112605.2629.1|Name=mRNA_M-pyrifera_M_contig112605.2629.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MYEAYAKRQGWRFEMLGSSPSDLGGFSEVTVLLSGDAVWTRMKHEAGTHR
VQRVPVTESQGRIHTSSATLMALPEAEEVEVDINDNDLRIDTYRSSGAGG
QSVNTMDSAVRITHVPTGVTVSMQDEKSQLKNKNKAMRVLRSRLLAIEQE
KANAEASDLRSSQVSTGDRSEKIRTYNFKENRVTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I
IPR005139PCRF