mRNA_M-pyrifera_M_contig101226.256.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A7W8M9C4_9BURK (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=1 Tax=Quisquiliibacterium transsilvanicum TaxID=1549638 RepID=A0A7W8M9C4_9BURK) HSP 1 Score: 336 bits (862), Expect = 6.910e-115 Identity = 167/203 (82.27%), Postives = 182/203 (89.66%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSLEG 609 DG ACDVT E + LV+ T++ +GPIDLFCSNAGAGG GVLTDA N+VWQ+QWELHVMSHLYAARAVLPSMI RGSGYLLNTASAAGLLAALGSGPY+VTKAAAVK AEFL+ITHGD GIKVSVLCPQGVNTAMAPR LGDGQTDGIIE ++LAQTVVETL ERFYV PHPEV EYVRRKG+DVDRW+GGM+RLRR+S G Sbjct: 53 DGMACDVTQEAQVQALVKATVDKYGPIDLFCSNAGAGGKGVLTDAPNEVWQKQWELHVMSHLYAARAVLPSMIERGSGYLLNTASAAGLLAALGSGPYTVTKAAAVKFAEFLSITHGDQGIKVSVLCPQGVNTAMAPRSLGDGQTDGIIEPEQLAQTVVETLREERFYVLPHPEVGEYVRRKGEDVDRWLGGMRRLRRKSQGG 255
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A0S8DH88_9PROT (Short-chain dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_40 TaxID=1703389 RepID=A0A0S8DH88_9PROT) HSP 1 Score: 332 bits (851), Expect = 3.260e-113 Identity = 163/202 (80.69%), Postives = 182/202 (90.10%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSLE 606 DG ACDVT+++ + DLV T HGPIDLFCSNAGA G GVLTDA++D WQ+ WELHVMSHLYAARAVLPSMIARG GYLLNTASAAGLLAA+GSGPY+VTKAAAVKLAEFLAITHGDDGI+VSVLCPQGVNTAMAPR LGDGQTDGIIEAD+LA+TVVE L ERF+V PHPEVE YVRRKGDD+DRW+ GM+RLRR+S++ Sbjct: 53 DGMACDVTDQRQVADLVARTTSVHGPIDLFCSNAGAIGHGVLTDAADDEWQRLWELHVMSHLYAARAVLPSMIARGEGYLLNTASAAGLLAAIGSGPYTVTKAAAVKLAEFLAITHGDDGIRVSVLCPQGVNTAMAPRSLGDGQTDGIIEADDLAKTVVEALRQERFHVLPHPEVETYVRRKGDDIDRWLTGMRRLRRQSMQ 254
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A2E1UGW3_9GAMM (Short-chain dehydrogenase n=3 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A2E1UGW3_9GAMM) HSP 1 Score: 330 bits (847), Expect = 1.330e-112 Identity = 163/202 (80.69%), Postives = 181/202 (89.60%), Query Frame = 1 Query: 4 GRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSLEG 609 G ACDVT+E + LV T + +G +D+FCSNAGAGG+G+LTDA+N+VWQQQWELHVMSHLYAARAVLP MI RG GYLLNTASAAGLLAALGSGPY+VTKAAAVK AEFL+ITHGDDGIKVSVLCPQGVNTAMAPR LGDGQTDGIIEA LAQTVVET+ ERF+V PHPEVEEYVRRKGD+VDRW+ GMQRLR+R+LEG Sbjct: 54 GMACDVTDEAQVAALVAATEDQYGQVDVFCSNAGAGGNGLLTDAANEVWQQQWELHVMSHLYAARAVLPGMIERGEGYLLNTASAAGLLAALGSGPYTVTKAAAVKFAEFLSITHGDDGIKVSVLCPQGVNTAMAPRSLGDGQTDGIIEASALAQTVVETMREERFHVLPHPEVEEYVRRKGDNVDRWLLGMQRLRKRTLEG 255
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A3B8RDC1_9GAMM (Short-chain dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B8RDC1_9GAMM) HSP 1 Score: 329 bits (844), Expect = 3.540e-112 Identity = 161/200 (80.50%), Postives = 181/200 (90.50%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRS 600 DGRAC+VT+E DII LV+W ++ +G IDLFCSNAGAGG+GVLTDA N VWQ QWELHVMSH+YAARAVLPSM+A+GSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGI VSVLCPQGVNTAMAP+ LGDGQTDGIIE + LAQ V++ L ERF+V PH EVE+YVRRKGDD+DRW+ GM+RLRR+S Sbjct: 53 DGRACNVTDEADIIALVDWVIDRYGRIDLFCSNAGAGGAGVLTDAENAVWQNQWELHVMSHVYAARAVLPSMLAQGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIGVSVLCPQGVNTAMAPKQLGDGQTDGIIEPEVLAQCVIDALADERFHVLPHAEVEDYVRRKGDDIDRWLNGMRRLRRQS 252
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A812XTV2_9DINO (PenF protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812XTV2_9DINO) HSP 1 Score: 326 bits (835), Expect = 4.150e-111 Identity = 157/200 (78.50%), Postives = 179/200 (89.50%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRS 600 +G AC+VT E D+ LVE L+ HG IDLFCSNAGAGG G+LTDA N+VWQQQWELHVMSHLYAARAVLP M+ RG GYLLNTASAAGLLAA+GSGPY+V+KAAAVKLAEFL+ITHGD+GI+VSVLCPQGVNTAMAPR LGDGQTDGIIE ++LAQTVVE + ERFYV PHPEVE+YVRRKGD++DRW+ GM+RLR+RS Sbjct: 33 EGYACNVTRENDVQTLVERVLQKHGHIDLFCSNAGAGGQGLLTDAPNEVWQQQWELHVMSHLYAARAVLPGMLERGEGYLLNTASAAGLLAAIGSGPYTVSKAAAVKLAEFLSITHGDEGIRVSVLCPQGVNTAMAPRSLGDGQTDGIIEPEQLAQTVVEAIAEERFYVLPHPEVEDYVRRKGDNIDRWLSGMRRLRKRS 232
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0YH52_9GAMM (Short-chain dehydrogenase/reductase SDR n=1 Tax=marine gamma proteobacterium HTCC2143 TaxID=247633 RepID=A0YH52_9GAMM) HSP 1 Score: 326 bits (836), Expect = 6.050e-111 Identity = 156/201 (77.61%), Postives = 180/201 (89.55%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSL 603 DG CDVTNE + +V+ TLE + IDLFCSNAGAG G+LTDA ND+WQ+QW+LHVMSHLYAARAVLP+MI RG GYLLNTASAAGLLAA+GSGPY+VTK AA+KLAEFL+ITHGD+GIKVSVLCPQGVNTAMAPR LGDGQTDGIIEAD+LA+TVV T+ ERFYV PHPEVE+YVRRKG+D+DRW+GGM+RLRR+S+ Sbjct: 53 DGEVCDVTNEDQLAAVVKRTLEKYDRIDLFCSNAGAGAGGLLTDAPNDIWQKQWDLHVMSHLYAARAVLPAMIERGDGYLLNTASAAGLLAAIGSGPYTVTKGAAIKLAEFLSITHGDEGIKVSVLCPQGVNTAMAPRSLGDGQTDGIIEADDLAKTVVNTIREERFYVLPHPEVEDYVRRKGNDIDRWLGGMRRLRRKSV 253
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A3D1EGF9_9GAMM (Short-chain dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D1EGF9_9GAMM) HSP 1 Score: 326 bits (835), Expect = 9.200e-111 Identity = 161/203 (79.31%), Postives = 180/203 (88.67%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSLEG 609 DGRAC+VT+E I +LV + +G +DLFCSNAGAGG GV DA+N+VW+ QW LHVM+H+YAARAVLP MI RG+GYLLNTASAAGLLAALGSGPY+VTKAAAVKLAEF++ITHGDDGIKVSVLCPQGVNTAMAPR LGDGQTDGIIEADELAQTVVETL ERFYV PHPEVEEYVRRKGD+VDRW+ GM+RLR RS+ G Sbjct: 53 DGRACNVTDEAQIQELVTYVETKYGRVDLFCSNAGAGGEGVFLDAANEVWENQWALHVMAHVYAARAVLPGMIERGAGYLLNTASAAGLLAALGSGPYTVTKAAAVKLAEFISITHGDDGIKVSVLCPQGVNTAMAPRRLGDGQTDGIIEADELAQTVVETLREERFYVLPHPEVEEYVRRKGDNVDRWLHGMRRLRARSVGG 255
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A6P2BKH3_9GAMM (SDR family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6P2BKH3_9GAMM) HSP 1 Score: 325 bits (832), Expect = 2.540e-110 Identity = 158/199 (79.40%), Postives = 180/199 (90.45%), Query Frame = 1 Query: 10 ACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSLE 606 ACDVT+EQ +I LV+ L+ HG IDLFCSNAGA G+GVLTDA N+VWQ+QWELHVM+H+YAARAVLPSM+ RG GYLLNTASAAGLLAA+G+GPY+VTKAAAVKLAEFLAITHGDDGI VSVLCPQGVNTAMAPRGLGDGQTDG+IE ++LA TVVE L ERF++ PHPEVE YVRRKGDD+DRW+ GM+RLRRRSL+ Sbjct: 56 ACDVTDEQAVIALVDQVLDRHGRIDLFCSNAGASGNGVLTDAPNEVWQKQWELHVMAHVYAARAVLPSMLERGEGYLLNTASAAGLLAAIGTGPYTVTKAAAVKLAEFLAITHGDDGIGVSVLCPQGVNTAMAPRGLGDGQTDGVIEPEQLAATVVEGLDAERFHILPHPEVETYVRRKGDDIDRWLIGMRRLRRRSLD 254
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A2D9WV36_9GAMM (Short-chain dehydrogenase n=7 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2D9WV36_9GAMM) HSP 1 Score: 322 bits (825), Expect = 2.960e-109 Identity = 159/201 (79.10%), Postives = 177/201 (88.06%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSL 603 DG ACDVT+E I+ LVE T HG ID+FCSNAGAGGSG+LT+A N VWQQQWELHVM+HLYAARAVLP M+ RGSGYL+NTASAAGLLAALGSGPY+VTKAAAVKLAEF+AITHGD+GI VSVLCPQGVNTAMAPR LGDGQTDGIIE LA TVVE + ERF+V PHPEVEEYVRRKGD++DRW+ GMQRLR+R+L Sbjct: 53 DGMACDVTDEAQIVALVEATEAKHGAIDVFCSNAGAGGSGLLTEAENAVWQQQWELHVMAHLYAARAVLPGMLKRGSGYLMNTASAAGLLAALGSGPYTVTKAAAVKLAEFIAITHGDEGIGVSVLCPQGVNTAMAPRSLGDGQTDGIIEPSALADTVVEAMREERFHVLPHPEVEEYVRRKGDNIDRWLLGMQRLRKRTL 253
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Match: A0A2D9JM45_9GAMM (Short-chain dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JM45_9GAMM) HSP 1 Score: 322 bits (824), Expect = 4.650e-109 Identity = 157/203 (77.34%), Postives = 178/203 (87.68%), Query Frame = 1 Query: 1 DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGA-GGSGVLTDASNDVWQQQWELHVMSHLYAARAVLPSMIARGSGYLLNTASAAGLLAALGSGPYSVTKAAAVKLAEFLAITHGDDGIKVSVLCPQGVNTAMAPRGLGDGQTDGIIEADELAQTVVETLGTERFYVHPHPEVEEYVRRKGDDVDRWIGGMQRLRRRSLE 606 + ACDVTNE I+DLV+ L HG IDLFCSNAGA G GVLTDA ND WQ+QW+LHVM+H+YAARAVLPSMI RG GYLLNTASAAGLLAA+GSGPYSVTKAAA+K AEF++I HGD+GI+VSVLCPQGVNTAMAPR LGDGQTDGIIE +ELA TVVETL ERFYV PHPEVE+YVRRKGD++DRW+ GM+RLRR+SL+ Sbjct: 53 EAEACDVTNEDQIVDLVDKVLARHGRIDLFCSNAGATAGGGVLTDAPNDAWQRQWDLHVMAHIYAARAVLPSMIERGEGYLLNTASAAGLLAAIGSGPYSVTKAAAIKFAEFVSIVHGDEGIRVSVLCPQGVNTAMAPRRLGDGQTDGIIEPEELATTVVETLREERFYVLPHPEVEDYVRRKGDNIDRWLNGMRRLRRKSLD 255 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101226.256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101226.256.1 >prot_M-pyrifera_M_contig101226.256.1 ID=prot_M-pyrifera_M_contig101226.256.1|Name=mRNA_M-pyrifera_M_contig101226.256.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp DGRACDVTNEQDIIDLVEWTLETHGPIDLFCSNAGAGGSGVLTDASNDVWback to top mRNA from alignment at M-pyrifera_M_contig101226:2..613+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101226.256.1 ID=mRNA_M-pyrifera_M_contig101226.256.1|Name=mRNA_M-pyrifera_M_contig101226.256.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig101226:2..613+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101226:2..613+ >mRNA_M-pyrifera_M_contig101226.256.1 ID=mRNA_M-pyrifera_M_contig101226.256.1|Name=mRNA_M-pyrifera_M_contig101226.256.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig101226:2..613+ (Macrocystis pyrifera P11B4 male)back to top |