mRNA_M-pyrifera_M_contig101162.250.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A517WVW3_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WVW3_9PLAN) HSP 1 Score: 192 bits (489), Expect = 9.570e-57 Identity = 103/220 (46.82%), Postives = 139/220 (63.18%), Query Frame = 1 Query: 13 ESVSA-RPEFKDRRVGLIAFGIGQLLMSGCVGLFLVMMVATASQQPG-----GLRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAPEFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLPAAFSGGVMPFFGFILKG 654 ES SA RP FKDR GLI FG+ Q+ M GC L + +M+ + + P +T++P G+Y +A+ L LGVGS ARRWAR LTLVLAW+WL++G + ++M P M+ + ++P + + M +GCMY+ LPGIFV+FYQS +VKATCE DPH+RWTD+CPLPVL +SLML + ++S +A G V PFFG ILKG Sbjct: 42 ESQSADRPAFKDRSTGLIIFGLLQIFMGGCCALMIPLMLLSLAVAPDVNPQLDTQTLVPAIGIYTLLAVLLIWLGVGSFLARRWARALTLVLAWIWLVIGIMAMIMIAVWM------PNLFNMIGQDQKIPPEMLLFMQVVMTGTIGCMYLFLPGIFVLFYQSKHVKATCEMKDPHVRWTDKCPLPVLAMSLMLGYSSLSIFYSASYGFVTPFFGIILKG 255
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A517VZ01_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZ01_9PLAN) HSP 1 Score: 186 bits (471), Expect = 4.730e-54 Identity = 97/213 (45.54%), Postives = 133/213 (62.44%), Query Frame = 1 Query: 31 PEFKDRRVGLIAFGIGQLLMSGCVGLFLVMMVATASQQPG-----GLRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAPEFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLPAAFSGGVMPFFGFILKG 654 P FKDR GLI FG+ Q+ M GC L + +M+ + + P +T++P G+Y +A+ L LGVGS ARRWAR LTLVLAWMWL++G L ++M ++ P M + ++P + + M + CMY+ LPGIFV+FYQS +VKATCE DPH+RWTD+CPLPVL +SL L + ++S +A G V PFFG +LKG Sbjct: 49 PPFKDRSTGLIIFGLLQIFMGGCCALMIPLMLLSLAVAPDVNPQLDTQTLVPAIGIYALLAVLLIWLGVGSFLARRWARALTLVLAWMWLVIGILAMIM------IVVWMPNLFNMAAQDQKIPPEMLLFMQVVMTGTISCMYLFLPGIFVLFYQSKHVKATCEMKDPHVRWTDKCPLPVLAMSLFLGYSSLSIFYSASYGFVTPFFGILLKG 255
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A5C6BCY0_9PLAN (Uncharacterized protein n=1 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6BCY0_9PLAN) HSP 1 Score: 183 bits (465), Expect = 4.230e-53 Identity = 104/215 (48.37%), Postives = 139/215 (64.65%), Query Frame = 1 Query: 31 PEFKDRRVGLIAFGIGQLLMSGCVGLFLVMMV------ATASQQPGGLRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAPEFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLPAAFS-GGVMPFFGFILKG 654 P+F DR GL+ FGI Q++M GC LV M+ + AS P +R ++P G+Y +A+ L LGVGS ARRWAR LTLVLAWMWL +G ++L+M M P L + + ++P ++ M + MGC+YI+LPGIF++FYQS +VKATCE D + RWTD+CPLPVL LSL LAFG +S +P + S G V+P FGF+LKG Sbjct: 48 PQFDDRSTGLLVFGILQIIM-GCFSAMLVPMMLLSTLASPASGAPTTVRMMLPAIGMYGMVAVVLIWLGVGSTLARRWARALTLVLAWMWLAMGLVSLIM------MCFVMPNMLSISAQDQKVPPQAMIIAQTVMMATMGCLYIILPGIFIIFYQSKHVKATCEFKDTYPRWTDKCPLPVLSLSLFLAFGALS-MPLSLSYGSVLPVFGFLLKG 254
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A2E0SM67_9PLAN (Uncharacterized protein n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SM67_9PLAN) HSP 1 Score: 181 bits (458), Expect = 4.040e-52 Identity = 102/224 (45.54%), Postives = 141/224 (62.95%), Query Frame = 1 Query: 1 NPLTESVSARPEFKDRRVGLIAFGIGQLLMSGCVGLFLVMMVATAS------QQPGGLRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAPEFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLPAAFSGGVMPFFGFILKG 654 +P+ E P F+DR+ GLI G+ Q+ M G + L+ M A ++ P +RT+IP G+Y +A+ L LG GSI ARRWAR LTLVLAWMW VG ++L+M M P + N + P + V+ G+M GC+Y++LPGI+++FYQS +VKATC++ DPH+RWTD+CPLPVL L+L+LA G S + +A G V+PFFG ILKG Sbjct: 33 SPVDEQEDGVPPFEDRKTGLILLGVLQVAMGGFFAMMLLFMAAMSAGGLARGPAPLDVRTMIPAMGIYGALAVVLVWLGFGSILARRWARALTLVLAWMWFAVGLVSLLM------MFVMGPGPFNVA-GNGQAPPQMMMFQVILFGTM-GCIYVILPGIYILFYQSRHVKATCDYYDPHIRWTDKCPLPVLPLTLLLASGAFSMVFSASYGFVVPFFGVILKG 248
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A517XFH0_9PLAN (Uncharacterized protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XFH0_9PLAN) HSP 1 Score: 179 bits (455), Expect = 1.350e-51 Identity = 100/217 (46.08%), Postives = 139/217 (64.06%), Query Frame = 1 Query: 22 SARPEFKDRRVGLIAFGIGQLLMSGCVGLFLVMM-----VATASQQPGGLRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAP-EFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLPAAFSGGVMPFFGFILKG 654 + +P+FKDR+ GLI +GI Q++M + + +M V A+ P ++T+IP G+Y +A+ L LGVGSI ARRWARTLTLVLAWMWL VG L+M +L P +F ++P ++ + M MG +Y LPGIF++FY+S +VKATC+ DPH+RWTD+CPLPVL +SLML FG +S + + G V+PFFG +LKG Sbjct: 46 AGQPQFKDRKTGLIVYGILQIIMGFFCAILIPLMLLPRFVGPAAGPPMNVQTLIPTMGMYALLAVLLVCLGVGSIFARRWARTLTLVLAWMWLAVGSTALLMLV----LLRLIPFDFAAQ---GQQIPPQMVMIIQVVMLGTMGFIYFFLPGIFILFYRSKHVKATCDFQDPHVRWTDQCPLPVLAMSLMLGFGAISMIFSMSYGFVLPFFGILLKG 255
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A5B9QKJ1_9BACT (Uncharacterized protein n=1 Tax=Roseimaritima ulvae TaxID=980254 RepID=A0A5B9QKJ1_9BACT) HSP 1 Score: 171 bits (434), Expect = 6.910e-49 Identity = 97/214 (45.33%), Postives = 130/214 (60.75%), Query Frame = 1 Query: 31 PEFKDRRVGLIAFGIGQLLMSGCVGLF--LVMMVATASQQPGGLRT--IIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAPEFLRMLDANDRM--PGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLPAAFSGGVMPFFGFILKG 654 P F+D+ +GL +G Q+ M G GL L+++ S Q GG +IP G+Y +A+ L LG GS++ RRWAR LTLVLAWMWL +G + LV+ P ++ A + P ++V+ +G+M CMY+VLPGIF++FYQ +V+ TCE DP +RWTD CPLPVL LSL+L FG S L +A G V PFFG ILKG Sbjct: 11 PRFRDQSIGLAIYGFLQIAMGGLAGLMVPLLLLSVAVSPQAGGTSAAQMIPAAGMYAVMAVALVWLGAGSVRGRRWARALTLVLAWMWLAMGVMALVVIIWWL------PNMSKVFAAQGQNIPPQGVTFMYVMMIGTM-SCMYVVLPGIFILFYQRADVRKTCEIKDPQVRWTDHCPLPVLSLSLLLGFGATSVLWSAGYGFVTPFFGIILKG 217
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A1G3AAI3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium RBG_16_64_12 TaxID=1801971 RepID=A0A1G3AAI3_9BACT) HSP 1 Score: 155 bits (393), Expect = 9.680e-43 Identity = 92/214 (42.99%), Postives = 129/214 (60.28%), Query Frame = 1 Query: 34 EFKDRRVGLIAFGIGQLLMSGCVGLFL-VMMVATASQQPGGL-----RTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAPEFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVS-FLPAAFSGGVMPFFGFILKG 654 +FKDR VGL+ FG+ Q+L+ L + +M+++ Q GG RT+IP+ Y A+ LG+GSI ARRWAR LTLVLAW+ L+ G L L+ + + L +MP VV + G+++GC+Y+ LPGIF++FY+S +V ATC DP +RWTD+CPLPVL +SL+L FG S L A G V P+FG +L+G Sbjct: 12 QFKDRTVGLVVFGVLQILIGAFCALAIPLMLLSLWLGQAGGAAAVNARTMIPVIAQYALAAVIAVWLGIGSILARRWARALTLVLAWIGLICGVLGLLFFFVFMG------DMYQQLAQEQKMPPQAVVVMQVVTGAVLGCIYVFLPGIFILFYRSKHVWATCRFKDPQVRWTDKCPLPVLAVSLLLGFGACSVILCAPAYGAVFPWFGVLLEG 219
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A3B8Q3M1_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3B8Q3M1_9BACT) HSP 1 Score: 136 bits (342), Expect = 3.120e-35 Identity = 82/211 (38.86%), Postives = 120/211 (56.87%), Query Frame = 1 Query: 40 KDRRVGLIAFGIGQLLMSGCVGLFLVMMVAT-----ASQQPGGLRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAPEFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLPAAFSG-GVMPFFGFILKG 654 +DR GL+ FG+ +L L + +MV + A PGG++ IIP +Y+ +A+ L LG+GSI+ARRWAR L ++L W WLLVG ++V + + + ++ +P + V + ++G +++V+PGI V+FY S +V+ATCE DP RWTD CPLPVL L LA L A S GV+PFFG +L G Sbjct: 14 RDRSAGLVIFGVLTILFGTICALLVPLMVISQTMTPAQVNPGGMQAIIPAALMYLGLAVILIWLGIGSIKARRWARALLVILFWGWLLVGVFSVVATALVMPPIMTSIQAMQP-GGQPPLPSSAIPVMITISLVILGLVFVVIPGIGVLFYSSSHVRATCEARDPVTRWTDACPLPVLAAVLWLALMVPMILLAPLSARGVLPFFGVVLTG 223
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A7X7QH69_9BACT (Uncharacterized protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7QH69_9BACT) HSP 1 Score: 136 bits (342), Expect = 4.380e-35 Identity = 85/225 (37.78%), Postives = 132/225 (58.67%), Query Frame = 1 Query: 13 ESVSARPEFKDRRVGLIAFG-----IGQLLMSGCVGLFLVMMVATASQQPGG---LRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLT-LVMXXXXXXMLTAAPEFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMRWTDRCPLPVLGLSLMLAFGTVSFLP--AAFSGGVMPFFGFILKG 654 +S A PEF+D+R+GLI FG IG + G + L+++V ++ P + ++P Y+ +AI LG GSI A+RWA +LT+V++W+W+++G +V+ +++A P+ R AN PG+ V +SM ++G Y+VLPG F+VFYQ TC DP RWT+RCPLP+L L++ML + + +LP + GGV PFFG ++ G Sbjct: 4 DSSPAIPEFRDQRIGLIIFGALQLAIGCFCVLGALFTSLLLLVNPSNMPPEAQVDAKMMLPGIMFYVLVAILFTTLGFGSILAKRWAWSLTVVISWLWMIIGLFAVIVLVLVMPSVMSAMPQQGR---AN-LPPGSLSAVMAISM-ILVGIFYVVLPGSFLVFYQRSATWETCRRRDPKARWTERCPLPLLALAIMLGYSAL-WLPFQLLYGGGVAPFFGKLVSG 222
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Match: A0A350KHD7_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KHD7_9PLAN) HSP 1 Score: 128 bits (321), Expect = 2.670e-33 Identity = 74/175 (42.29%), Postives = 108/175 (61.71%), Query Frame = 1 Query: 22 SARPEFKDRRVGLIAFGIGQLLMSGCVGLFLVMM-----VATASQQPGGLRTIIPLFGVYIPIAIGLAVLGVGSIQARRWARTLTLVLAWMWLLVGCLTLVMXXXXXXMLTAAP-EFLRMLDANDRMPGNFEVVFVLSMGSMMGCMYIVLPGIFVVFYQSGNVKATCEHADPHMR 528 + +P+FKDR+ GLI +GI Q++M + + +M V+ A+ P ++T+IP G+Y +A+ L LG+GSI ARRWARTLTLVLAWMWL VG L+M +L P +F ++P ++ + M MG +Y LPGIF++FY+S +VKATC+ DPH+R Sbjct: 46 AGQPQFKDRKTGLIVYGILQIIMGFFCAILIPLMLLPRFVSPAAGPPMNVQTLIPTMGMYALLAVLLVCLGIGSIFARRWARTLTLVLAWMWLAVGSTALLMLV----LLRLIPFDFAAQ---GQQIPPQMVMIIQVVMLGTMGFIYFFLPGIFILFYRSKHVKATCDFQDPHVR 213 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101162.250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101162.250.1 >prot_M-pyrifera_M_contig101162.250.1 ID=prot_M-pyrifera_M_contig101162.250.1|Name=mRNA_M-pyrifera_M_contig101162.250.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp NPLTESVSARPEFKDRRVGLIAFGIGQLLMSGCVGLFLVMMVATASQQPGback to top mRNA from alignment at M-pyrifera_M_contig101162:1..654- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101162.250.1 ID=mRNA_M-pyrifera_M_contig101162.250.1|Name=mRNA_M-pyrifera_M_contig101162.250.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig101162:1..654- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101162:1..654- >mRNA_M-pyrifera_M_contig101162.250.1 ID=mRNA_M-pyrifera_M_contig101162.250.1|Name=mRNA_M-pyrifera_M_contig101162.250.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig101162:1..654- (Macrocystis pyrifera P11B4 male)back to top |