prot_M-pyrifera_M_contig111839.2476.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111839.2476.1
Unique Nameprot_M-pyrifera_M_contig111839.2476.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length196
Homology
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A453LQQ1_AEGTS (Uncharacterized protein n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453LQQ1_AEGTS)

HSP 1 Score: 155 bits (392), Expect = 2.920e-43
Identity = 80/160 (50.00%), Postives = 99/160 (61.88%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRSG--DKPVKETVAHAGEANALS 158
            PQNSF+IATKT S +V V+DY+ HPS+PP D    NP LRL+GH  EGYGL W+   EG LLSG+DD +IC+WD   +G                 LD   +F+ H  VVEDVAW     ++FGSV DD  LL+WD+RS    KPV+  VAH GE N L+
Sbjct:    2 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLRLKGHNSEGYGLSWSIFKEGHLLSGSDDAQICLWDITANGKNK-------------TLDAYQIFKFHDGVVEDVAWHLRHEYLFGSVGDDHHLLIWDMRSPAPTKPVQSVVAHQGEVNCLA 147          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: UPI001C4C3D16 (WD-40 repeat-containing protein MSI1-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C3D16)

HSP 1 Score: 158 bits (399), Expect = 4.250e-43
Identity = 81/159 (50.94%), Postives = 100/159 (62.89%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS-GDKPVKETVAHAGEANALS 158
            PQN+F+IATKT S +V V+DY+ HPS+PP D    NP LRLRGH  EGYGL W++  +G LLSG+DD +IC+WD N                    LD L +F+ H  VVEDVAW     + FGSV DD  LLLWD+R+  +KPVK  VAH GE N L+
Sbjct:  135 PQNTFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLRLRGHNSEGYGLSWSQFKQGHLLSGSDDAQICLWDINA-------------APKNKTLDALQIFKVHDGVVEDVAWHLRHEYYFGSVGDDHYLLLWDLRTTNNKPVKSVVAHQGEVNCLA 279          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A444ECT7_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444ECT7_ENSVE)

HSP 1 Score: 153 bits (386), Expect = 7.910e-43
Identity = 79/159 (49.69%), Postives = 97/159 (61.01%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRSGD-KPVKETVAHAGEANALS 158
            PQN F+IATKT S +V V+DY+ HPS+PP D    NP L+LRGH  EGYGL W++  +G LLSG+DD +IC+WD N                    LD L  F+ H  VVEDVAW     + FGSV DD  LLLWD+R  + KPVK  +AH GE N L+
Sbjct:    2 PQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLKLRGHNSEGYGLSWSQFKQGHLLSGSDDAQICLWDINS-------------TPKNKALDALQTFKVHDGVVEDVAWHLRHEYYFGSVGDDHYLLLWDLRMPNTKPVKSVIAHQGEVNCLA 146          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: UPI00053AAEA1 (histone-binding protein MSI1 isoform X2 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053AAEA1)

HSP 1 Score: 156 bits (394), Expect = 1.140e-42
Identity = 79/160 (49.38%), Postives = 100/160 (62.50%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS--GDKPVKETVAHAGEANALS 158
            PQN F+IATKT + +V V+DY+ HPS+PP D    NP LRLRGH+ EGYGL W+K  +G LLSG+DD +IC+WD N                    LD   +F+ H  VVEDVAW     H+FGSV DD+ LL+WD+RS    KPV+  VAH+ E N L+
Sbjct:  135 PQNPFMIATKTVNAEVYVFDYSKHPSKPPLDGA-CNPDLRLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINA-------------TPKNRTLDAQQIFKAHEGVVEDVAWHLRHEHLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLA 280          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A7J9FLD6_9ROSI (Uncharacterized protein n=1 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9FLD6_9ROSI)

HSP 1 Score: 155 bits (391), Expect = 1.140e-42
Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVR--SGDKPVKETVAHAGEANALS 158
            PQNSF+IATKT S +V V+DY+ HPS+PP D    +P LRLRGH+ EGYGL W+K  EG LLSG+DD +IC+WD N                    LD + +F+ H  VVEDVAW     ++FGSV DD+ LL+WD+R  S  KP++  VAH  E N L+
Sbjct:   52 PQNSFIIATKTVSAEVFVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA-------------TPKNKALDAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVTKPIQSVVAHQSEVNCLA 197          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A833R4V8_9POAL (Multicopy suppressor of IRA1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R4V8_9POAL)

HSP 1 Score: 157 bits (396), Expect = 1.220e-42
Identity = 79/159 (49.69%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS-GDKPVKETVAHAGEANALS 158
            PQN F+IATKT S +V V+DY+ HPS+PP D    NP LRLRGH+ EGYGL W+   +G LLSG+DD +IC+WD  G+                  LD L +F+ H  VVEDVAW     ++FGSV DD  LL+WD+RS   +PV++ VAH GE N L+
Sbjct:  135 PQNQFIIATKTVSAEVYVFDYSKHPSKPPLDGT-CNPDLRLRGHSSEGYGLSWSVFKDGHLLSGSDDAQICMWDIKGNSKNK-------------TLDALQIFKYHEGVVEDVAWHLRHEYLFGSVGDDHHLLIWDLRSRSQQPVEKVVAHQGEVNCLA 279          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A6J0MP30_RAPSA (histone-binding protein MSI1-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0MP30_RAPSA)

HSP 1 Score: 153 bits (387), Expect = 2.260e-42
Identity = 77/160 (48.12%), Postives = 100/160 (62.50%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS--GDKPVKETVAHAGEANALS 158
            PQN F+IATKT + +V V+DY+ HPS+PP D    NP LRLRGH+ EGYGL W+K   G LLSG+DD +IC+WD N                   V+D   +F+ H  VVEDVAW     ++FGSV DD+ LL+WD+RS    KP++  VAH+ E N L+
Sbjct:   23 PQNPFVIATKTVNAEVYVFDYSKHPSKPPLDGA-CNPDLRLRGHSSEGYGLSWSKFKPGHLLSGSDDAQICLWDINA-------------TPKNKVIDAQQIFKAHEGVVEDVAWHMSHEYLFGSVGDDQYLLIWDLRSPSASKPIQSVVAHSMEVNCLA 168          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A814BMB1_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814BMB1_9BILA)

HSP 1 Score: 156 bits (394), Expect = 2.310e-42
Identity = 78/160 (48.75%), Postives = 99/160 (61.88%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRS--GDKPVKETVAHAGEANALS 158
            PQN  +IATKTPS  V ++DY  HPS+P + + E NP+LRL+GHT+EGYGL WN    G LLS +DD  IC+W+ N + +                LD L +F GHT VVEDVAW      +FGSV DDK+L+LWD RS   +KP +   AH+ E N LS
Sbjct:  133 PQNQCIIATKTPSSDVLIFDYTKHPSKP-DPSGECNPELRLKGHTKEGYGLSWNPNVNGHLLSASDDHTICLWNINANPTNK-------------ALDALSIFTGHTAVVEDVAWHLLHDSIFGSVGDDKKLMLWDTRSTGANKPTQIIDAHSAEVNCLS 278          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A6A1WKQ8_9ROSI (WD-40 repeat-containing protein MSI1 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1WKQ8_9ROSI)

HSP 1 Score: 155 bits (391), Expect = 2.560e-42
Identity = 78/158 (49.37%), Postives = 100/158 (63.29%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVR--SGDKPVKETVAHAGEANA 156
            PQNSF+IATKT S +V V+DY+ HPS+PP D    +P LRLRGH+ EGYGL W+K  +G LLSG+DD +IC+WD N                    LD + +F+ H  VVEDVAW     H+FGSV DD+ LL+WD+R  S  KPV+  +AH  E+ A
Sbjct:  135 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKQGHLLSGSDDAQICLWDINS-------------TPKNKTLDAMQIFKVHEGVVEDVAWHLRHEHLFGSVGDDQHLLIWDLRTSSASKPVQSVIAHQSESVA 278          
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Match: A0A453LR20_AEGTS (CAF1C_H4-bd domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LR20_AEGTS)

HSP 1 Score: 155 bits (392), Expect = 2.830e-42
Identity = 80/160 (50.00%), Postives = 99/160 (61.88%), Query Frame = 0
Query:    1 PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYGLDWNKTHEGRLLSGADDKRICVWDTNGHGSXXXXXXXXXXXXXXAVLDPLHVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRSG--DKPVKETVAHAGEANALS 158
            PQNSF+IATKT S +V V+DY+ HPS+PP D    NP LRL+GH  EGYGL W+   EG LLSG+DD +IC+WD   +G                 LD   +F+ H  VVEDVAW     ++FGSV DD  LL+WD+RS    KPV+  VAH GE N L+
Sbjct:  131 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGA-CNPDLRLKGHNSEGYGLSWSIFKEGHLLSGSDDAQICLWDITANGKNK-------------TLDAYQIFKFHDGVVEDVAWHLRHEYLFGSVGDDHHLLIWDMRSPAPTKPVQSVVAHQGEVNCLA 276          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111839.2476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A453LQQ1_AEGTS2.920e-4350.00Uncharacterized protein n=2 Tax=Triticinae TaxID=1... [more]
UPI001C4C3D164.250e-4350.94WD-40 repeat-containing protein MSI1-like n=2 Tax=... [more]
A0A444ECT7_ENSVE7.910e-4349.69Uncharacterized protein n=1 Tax=Ensete ventricosum... [more]
UPI00053AAEA11.140e-4249.38histone-binding protein MSI1 isoform X2 n=1 Tax=Ca... [more]
A0A7J9FLD6_9ROSI1.140e-4249.38Uncharacterized protein n=1 Tax=Gossypium trilobum... [more]
A0A833R4V8_9POAL1.220e-4249.69Multicopy suppressor of IRA1 n=1 Tax=Carex littled... [more]
A0A6J0MP30_RAPSA2.260e-4248.13histone-binding protein MSI1-like n=1 Tax=Raphanus... [more]
A0A814BMB1_9BILA2.310e-4248.75Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A6A1WKQ8_9ROSI2.560e-4249.37WD-40 repeat-containing protein MSI1 n=1 Tax=Morel... [more]
A0A453LR20_AEGTS2.830e-4250.00CAF1C_H4-bd domain-containing protein n=1 Tax=Aegi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 167..181
score: 34.85
coord: 61..75
score: 36.03
coord: 123..137
score: 32.14
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 96..136
e-value: 2.4E-6
score: 37.1
coord: 34..74
e-value: 1.5E-4
score: 31.1
coord: 140..180
e-value: 6.8E-5
score: 32.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 38..74
e-value: 0.17
score: 12.8
coord: 98..136
e-value: 3.0E-6
score: 27.8
coord: 143..180
e-value: 0.25
score: 12.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 103..145
score: 11.879
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 41..74
score: 9.74
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 147..183
score: 11.444
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..196
e-value: 1.4E-59
score: 204.2
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 1..194
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 61..75
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 167..181
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 41..196
score: 20.25
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111839contigM-pyrifera_M_contig111839:2..589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111839.2476.1mRNA_M-pyrifera_M_contig111839.2476.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111839 2..589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111839.2476.1 ID=prot_M-pyrifera_M_contig111839.2476.1|Name=mRNA_M-pyrifera_M_contig111839.2476.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp
PQNSFLIATKTPSGQVCVYDYALHPSEPPEDAEEANPQLRLRGHTREGYG
LDWNKTHEGRLLSGADDKRICVWDTNGHGSGGGGGGGGGGGGGGAVLDPL
HVFEGHTDVVEDVAWSPFQSHVFGSVSDDKRLLLWDVRSGDKPVKETVAH
AGEANALSFNPFMETLLATGGADKVVALWDMRNLASPLHRLEAHID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf