mRNA_M-pyrifera_M_contig101155.247.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101155.247.1
Unique NamemRNA_M-pyrifera_M_contig101155.247.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A3D4UNN6_9BACT (Asparaginase domain-containing protein n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A3D4UNN6_9BACT)

HSP 1 Score: 191 bits (485), Expect = 1.660e-57
Identity = 90/128 (70.31%), Postives = 107/128 (83.59%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFVM 384
            INT+QLMQKDSLEM+DADR+RI GAVEL+    D P DC GI+ILHGTDTLC+TG ++ + L    +P+ILTGAMRPFEMKRSDALQNL E++FA+   +PGVWV AHGRALKFPGP+KDR RGTFV+
Sbjct:  240 INTLQLMQKDSLEMTDADRQRILGAVELL----DDPVDCGGIIILHGTDTLCDTGNFLHRELEKPTIPIILTGAMRPFEMKRSDALQNLNEAIFASGILEPGVWVVAHGRALKFPGPIKDRQRGTFVV 363          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A2A4RNX4_9BACT (Asparaginase n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RNX4_9BACT)

HSP 1 Score: 184 bits (466), Expect = 4.530e-57
Identity = 84/130 (64.62%), Postives = 104/130 (80.00%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFVMGS 390
            INT+QLM KDSL+ +D+DR+RIAGAV+L+ G    PTDC GI+ILHGTDTLC+TGEY+   + +  +P+ILTGAMRPFEMKRSDALQNL E++FA  +  PG++V AHG A +FPGP KDR RGTFV  S
Sbjct:   45 INTLQLMSKDSLDFTDSDRRRIAGAVDLLTGTKXDPTDCIGIIILHGTDTLCQTGEYLYNQIENPTIPIILTGAMRPFEMKRSDALQNLNEAIFATGSLKPGIYVVAHGNAHQFPGPTKDRERGTFVKQS 174          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A3M2CJY7_9BACT (Asparaginase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CJY7_9BACT)

HSP 1 Score: 170 bits (430), Expect = 1.730e-51
Identity = 83/127 (65.35%), Postives = 99/127 (77.95%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPD-LHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTF 378
            +NT+QLMQKDSL ++DADR+RI GAVEL++G +D P++  G+VILHGTDTL  TGE +   +   L VPVILTGAMRPFEMKRSDALQNLTE++FA      GVW  AHGRAL+FPG  KDR  GTF
Sbjct:   45 VNTLQLMQKDSLHLTDADRERIVGAVELIVGPADHPSESEGVVILHGTDTLSVTGELLHARISGWLRVPVILTGAMRPFEMKRSDALQNLTEAIFATGVLGAGVWAVAHGRALRFPGVRKDREVGTF 171          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A7D8UKZ9_9BACT (Asparaginase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7D8UKZ9_9BACT)

HSP 1 Score: 156 bits (395), Expect = 3.340e-46
Identity = 78/127 (61.42%), Postives = 91/127 (71.65%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFV 381
            +N ++LM KDSL M DADRKRI   V  V G  D PT+  GIVILHGTDTL  TG  +  A+    +P++LTGAMRPFEM RSDALQNLTE++FAA    PGV+  AHGRAL FPG  KDR+ GTFV
Sbjct:   45 VNVVELMHKDSLHMDDADRKRIVETVRAVGGDWDLPTESDGIVILHGTDTLEVTGRALHAAIEKPRIPIVLTGAMRPFEMTRSDALQNLTEAIFAAGVLSPGVYAVAHGRALAFPGVRKDRASGTFV 171          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A6M8W5Y1_9BACT (Asparaginase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A6M8W5Y1_9BACT)

HSP 1 Score: 156 bits (395), Expect = 4.130e-46
Identity = 76/127 (59.84%), Postives = 95/127 (74.80%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFV 381
            INT++LM KDSL M DADR+RI   V+ V G+ D      GIVILHGTDTL +TGE +  A+P+  VP++LTGAMRP+EM R+DALQNLTE++FA    +PGVW  AHGRAL+FPG +K+R   TFV
Sbjct:   45 INTVELMSKDSLLMDDADRRRIVDTVKAVGGSGDVAAPTTGIVILHGTDTLEQTGEALCAAIPEPRVPIVLTGAMRPYEMVRTDALQNLTEAVFATGLLEPGVWCVAHGRALRFPGVVKNRQLSTFV 171          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A2E2NAJ3_9BACT (Asparaginase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2NAJ3_9BACT)

HSP 1 Score: 155 bits (393), Expect = 6.140e-46
Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASD--SPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFVMGS 390
            IN++QL+ KDS +++DADR+RI     +++G  D     D  G+VILHGTDTL  TGE +   +PD   P+ILTGAMRPFEMK SDALQNLTE++FA     PGV+  AHGRAL+FPG +KDR+RGTF MG+
Sbjct:   45 INSVQLLSKDSNDLTDADRRRIVDMTRIMLGDGDFDKDGDTDGVVILHGTDTLHVTGELLLAEIPDPPAPIILTGAMRPFEMKSSDALQNLTEAIFATGALSPGVYAVAHGRALRFPGVVKDRTRGTFCMGA 176          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A7L9BNG5_9BACT (Asparaginase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7L9BNG5_9BACT)

HSP 1 Score: 153 bits (386), Expect = 7.990e-45
Identity = 76/129 (58.91%), Postives = 92/129 (71.32%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFVMG 387
            ++ ++LM KDSL ++  DR+ +  AV    G+ D  T   GIVILHGTDTL  TG+ +  A+P   VP++LTGAMRPFEMKRSDALQNLTE+LFAA    PGV+  AHGRAL FPG  KDR RGTFV G
Sbjct:   45 VSIIELMSKDSLHLTHDDRRAVVEAVRAAGGSPDLTTSTSGIVILHGTDTLHLTGQAVLDAVPTPRVPIVLTGAMRPFEMKRSDALQNLTEALFAAGVLPPGVYAVAHGRALAFPGVRKDRERGTFVKG 173          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A6N2E7G1_9BACT (Asparaginase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A6N2E7G1_9BACT)

HSP 1 Score: 151 bits (382), Expect = 2.870e-44
Identity = 75/128 (58.59%), Postives = 90/128 (70.31%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFVM 384
            IN ++L+ KDSL ++DADR+RI   V+     S       GIVILHGTDTL +TG+ +   +P+  VP++LTGAMRPFEM RSDALQNLTE+LF A    PGVW  AHGRALKFPG  KDR  GTFV 
Sbjct:   45 INIIELLSKDSLMLTDADRRRIVDVVKATGADSAERAVADGIVILHGTDTLEQTGDLLLSEIPEPRVPIVLTGAMRPFEMVRSDALQNLTEALFGAGVLGPGVWCVAHGRALKFPGVRKDRDAGTFVQ 172          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: UPI001AD433F2 (L-asparaginase 1 n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001AD433F2)

HSP 1 Score: 151 bits (381), Expect = 3.940e-44
Identity = 77/127 (60.63%), Postives = 88/127 (69.29%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFV 381
            +N ++LM KDSL M+D DR+RIA AV    G     T+  GIV+LHGTDTL  TGE +    P+  VP+ILTGAMRPFEM RSDALQNLTESLFAA    PGV+  AHGRAL FPG  KDR   TF 
Sbjct:   45 VNVIELMSKDSLLMTDDDRRRIADAVHAAGGGPGLVTESTGIVVLHGTDTLALTGEALHARFPEPRVPIILTGAMRPFEMTRSDALQNLTESLFAAGVLGPGVYCVAHGRALPFPGVEKDREARTFA 171          
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Match: A0A3M2BFD8_9BACT (Asparaginase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BFD8_9BACT)

HSP 1 Score: 149 bits (377), Expect = 2.280e-43
Identity = 70/127 (55.12%), Postives = 91/127 (71.65%), Query Frame = 1
Query:    1 INTMQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCETGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGVWVAAHGRALKFPGPMKDRSRGTFV 381
            + T+ L+ KDS +++D DR RI   V ++ G+ D    C G+VILHGTDTLC TGE + K+ P    P++LTGAMRP+EMKRSDALQN TE++FA     PGV+V AH RAL+FPG +K+  RGTFV
Sbjct:   61 VTTLPLLSKDSNDLTDQDRSRIVDTVRVLTGSDD----CSGVVILHGTDTLCITGELLHKSFPSPPCPIVLTGAMRPYEMKRSDALQNFTEAIFATGVLQPGVYVVAHSRALRFPGVVKNVDRGTFV 183          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101155.247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D4UNN6_9BACT1.660e-5770.31Asparaginase domain-containing protein n=2 Tax=Phy... [more]
A0A2A4RNX4_9BACT4.530e-5764.62Asparaginase n=1 Tax=bacterium TaxID=1869227 RepID... [more]
A0A3M2CJY7_9BACT1.730e-5165.35Asparaginase n=1 Tax=Planctomycetes bacterium TaxI... [more]
A0A7D8UKZ9_9BACT3.340e-4661.42Asparaginase n=1 Tax=Phycisphaerales bacterium Tax... [more]
A0A6M8W5Y1_9BACT4.130e-4659.84Asparaginase n=1 Tax=Planctomycetes bacterium TaxI... [more]
A0A2E2NAJ3_9BACT6.140e-4657.58Asparaginase n=1 Tax=Phycisphaerae bacterium TaxID... [more]
A0A7L9BNG5_9BACT7.990e-4558.91Asparaginase n=1 Tax=Phycisphaeraceae bacterium Ta... [more]
A0A6N2E7G1_9BACT2.870e-4458.59Asparaginase n=1 Tax=Phycisphaerales bacterium Tax... [more]
UPI001AD433F23.940e-4460.63L-asparaginase 1 n=1 Tax=Phycisphaerales bacterium... [more]
A0A3M2BFD8_9BACT2.280e-4355.12Asparaginase n=1 Tax=Planctomycetes bacterium TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101155contigM-pyrifera_M_contig101155:5..397 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score126.7
Seed ortholog evalue7.7e-27
Seed eggNOG ortholog1123274.KB899407_gene236
Preferred nameaspG
KEGG rclassRC00010,RC02798
KEGG koko:K01424
KEGG ReactionR00485
KEGG Pathwayko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.asparaginase activity
EggNOG OGsCOG0252@1,COG0252@2
EC3.5.1.1
COG Functional cat.EJ
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size393
Cds size384
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815509.2086198-UTR-M-pyrifera_M_contig101155:4..131622815509.2086198-UTR-M-pyrifera_M_contig101155:4..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101155 5..13 +
1692277443.5475323-UTR-M-pyrifera_M_contig101155:4..131692277443.5475323-UTR-M-pyrifera_M_contig101155:4..13Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig101155 5..13 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815509.2227435-CDS-M-pyrifera_M_contig101155:13..3971622815509.2227435-CDS-M-pyrifera_M_contig101155:13..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101155 14..397 +
1692277443.5590782-CDS-M-pyrifera_M_contig101155:13..3971692277443.5590782-CDS-M-pyrifera_M_contig101155:13..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101155 14..397 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101155.247.1prot_M-pyrifera_M_contig101155.247.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101155 14..397 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101155.247.1

>prot_M-pyrifera_M_contig101155.247.1 ID=prot_M-pyrifera_M_contig101155.247.1|Name=mRNA_M-pyrifera_M_contig101155.247.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=128bp
MQLMQKDSLEMSDADRKRIAGAVELVIGASDSPTDCCGIVILHGTDTLCE
TGEYIEKALPDLHVPVILTGAMRPFEMKRSDALQNLTESLFAASTFDPGV
WVAAHGRALKFPGPMKDRSRGTFVMGS*
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mRNA from alignment at M-pyrifera_M_contig101155:5..397+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101155.247.1 ID=mRNA_M-pyrifera_M_contig101155.247.1|Name=mRNA_M-pyrifera_M_contig101155.247.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig101155:5..397+ (Macrocystis pyrifera P11B4 male)
ATCAACACGATGCAACTAATGCAGAAGGACTCGCTGGAGATGTCTGACGC TGATCGCAAACGGATCGCAGGAGCTGTCGAGCTTGTGATCGGCGCCAGCG ACTCCCCCACTGATTGCTGCGGGATCGTGATCCTGCACGGCACAGACACG CTGTGCGAGACGGGTGAGTACATCGAGAAAGCACTCCCGGATCTCCATGT CCCCGTGATCTTGACGGGCGCGATGCGCCCGTTCGAGATGAAACGCTCGG ACGCGCTGCAGAACTTGACAGAATCACTGTTCGCGGCGAGCACTTTCGAT CCCGGCGTGTGGGTCGCGGCGCACGGGCGCGCGCTGAAGTTCCCTGGGCC GATGAAGGATCGGAGCAGGGGGACATTTGTGATGGGGAGCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101155:5..397+

>mRNA_M-pyrifera_M_contig101155.247.1 ID=mRNA_M-pyrifera_M_contig101155.247.1|Name=mRNA_M-pyrifera_M_contig101155.247.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=768bp|location=Sequence derived from alignment at M-pyrifera_M_contig101155:5..397+ (Macrocystis pyrifera P11B4 male)
ATGCAACTAATGCAGAAGGACTCGCTGGAGATGTCTGACGCTGATCGCAA
ACGGATCGCAGGAGCTGTCGAGCTTGTGATCGGCGCCAGCGACTCCCCCA
CTGATTGCTGCGGGATCGTGATCCTGCACGGCACAGACACGCTGTGCGAG
ACGGGTGAGTACATCGAGAAAGCACTCCCGGATCTCCATGTCCCCGTGAT
CTTGACGGGCGCGATGCGCCCGTTCGAGATGAAACGCTCGGACGCGCTGC
AGAACTTGACAGAATCACTGTTCGCGGCGAGCACTTTCGATCCCGGCGTG
TGGGTCGCGGCGCACGGGCGCGCGCTGAAGTTCCCTGGGCCGATGAAGGA
TCGGAGCAGGGGGACATTTGTGATGGGGAGCTAGATGCAACTAATGCAGA
AGGACTCGCTGGAGATGTCTGACGCTGATCGCAAACGGATCGCAGGAGCT
GTCGAGCTTGTGATCGGCGCCAGCGACTCCCCCACTGATTGCTGCGGGAT
CGTGATCCTGCACGGCACAGACACGCTGTGCGAGACGGGTGAGTACATCG
AGAAAGCACTCCCGGATCTCCATGTCCCCGTGATCTTGACGGGCGCGATG
CGCCCGTTCGAGATGAAACGCTCGGACGCGCTGCAGAACTTGACAGAATC
ACTGTTCGCGGCGAGCACTTTCGATCCCGGCGTGTGGGTCGCGGCGCACG
GGCGCGCGCTGAAGTTCCCTGGGCCGATGAAGGATCGGAGCAGGGGGACA
TTTGTGATGGGGAGCTAG
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