prot_M-pyrifera_M_contig11176.2455.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig11176.2455.1
Unique Name	prot_M-pyrifera_M_contig11176.2455.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	183

Homology

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 7.840e-119
Identity = 170/182 (93.41%), Postives = 177/182 (97.25%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCCG 182
            MLRFTDDTFDDHLQSTIGVDFKVKMVDA GKRIK+TIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEV+QK+LDNPSLLANTAPGRPR T+DP+ P+ N+ GGGLCCG
Sbjct:   29 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPNQAGGGLCCG 210

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.160e-90
Identity = 136/180 (75.56%), Postives = 155/180 (86.11%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLC 180
            MLRFTDD+FDD LQSTIGVDFKVKM++   K+IK+TIWDTAGQERFRTLTSSYYRGAQGIMLVYDV RPETFDNL+KWLEEVETYHPGRGR+VVKLLVGNKVD  R V R QAE +ARSKGMLFLEASAKT+VG++Q FEEV+ K+L++P+LLANT PG+PR+    A  +T   G G C
Sbjct:   27 MLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVERPETFDNLNKWLEEVETYHPGRGRDVVKLLVGNKVDCPRAVPREQAEAWARSKGMLFLEASAKTEVGIRQAFEEVVHKILESPALLANTTPGKPRTVDLAATQNTPPSGAGGC 206

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 262 bits (669), Expect = 1.570e-86
Identity = 134/186 (72.04%), Postives = 155/186 (83.33%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRS-----TIDPAGPSTNEGGGGLCC 181
            +LRFTDDTFDDHLQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ETF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R + E +ARSKGMLF+E+SAKTK+G++QVF EV+QK+LDNP+LLANTAP R R+     + D   P  N GGG  CC
Sbjct:   29 LLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVARKETFENLGTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAP-RSRAKKVNLSADKYAPHANAGGG--CC 211

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A4D9D7L4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L4_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.950e-86
Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 181
            +LRFTDD FDDH QSTIGVDFKVKM++   KRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R E+F+NL+ WL+EVE Y  G GRE+VK+LVGNKVDKER+V R +AE +ARSKGMLFLEASAKT+ G++QVF EV+QK+LDNPSLL NTAPGRPR  +     +  +G GG CC
Sbjct:   29 LLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPRVNLQ--ADAAAKGSGGYCC 207

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.080e-84
Identity = 127/181 (70.17%), Postives = 154/181 (85.08%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 181
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL+NTAP      +D  G +   GGG  CC
Sbjct:   64 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRNRGRKLD--GKAEKSGGGSGCC 242

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A6G0KMK3_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0KMK3_9STRA)

HSP 1 Score: 258 bits (658), Expect = 3.640e-84
Identity = 127/181 (70.17%), Postives = 154/181 (85.08%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 181
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL+NTAP      +D  G +   GGG  CC
Sbjct:   81 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRNRGRKLD--GKAEKSGGGSGCC 259

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 255 bits (651), Expect = 6.360e-84
Identity = 126/181 (69.61%), Postives = 153/181 (84.53%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 181
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL+NTAP      +D    +   GGG  CC
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRSRGRKLDAK--AEKSGGGNGCC 202

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: K3WMM1_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WMM1_GLOUD)

HSP 1 Score: 254 bits (650), Expect = 9.340e-84
Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 181
            +LRFTDDTFDD+LQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  G++VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL  T P R       +G     GGGG CC
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGKDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLGTTRP-RTNDRATLSGKDGKSGGGGGCC 203

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A024TX33_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TX33_9STRA)

HSP 1 Score: 251 bits (640), Expect = 6.250e-82
Identity = 127/183 (69.40%), Postives = 151/183 (82.51%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTID--PAGPSTNEGGGGLCC 181
            +LRFT+DTFDDHLQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R + E +ARSKGMLF+E+SAKTK G++QVF EV+QK+LDNP+LL+NTAP    + +D   A P+ + G    CC
Sbjct:   46 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFANLDTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRREGEAWARSKGMLFVESSAKTKTGIQQVFNEVVQKILDNPTLLSNTAPKSRVAKLDLADARPAASSG----CC 224

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BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A485LUC0_9STRA (Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LUC0_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.080e-81
Identity = 121/166 (72.89%), Postives = 143/166 (86.14%), Query Frame = 0

Query:    1 MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTID 166
            +LRFT+DTFDDHLQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EV+ Y P  GR+VVKLLVGNK+DKER V+R + E +AR+KGMLF+E+SAKTK G++QVF EV+QK+LDNPSLL+NTAP      ID
Sbjct:   29 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDTWLQEVQVYSPANGRDVVKLLVGNKIDKERAVSRKEGEAWARTKGMLFVESSAKTKTGIQQVFNEVVQKILDNPSLLSNTAPKSRAKKID 194

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G245_ECTSI	7.840e-119	93.41	Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835YPZ0_9STRA	3.160e-90	75.56	Rab18, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A067C8B0_SAPPC	1.570e-86	72.04	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
A0A4D9D7L4_9STRA	1.950e-86	71.82	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A6A3N672_9STRA	2.080e-84	70.17	Uncharacterized protein n=21 Tax=Peronosporaceae T...	[more]
A0A6G0KMK3_9STRA	3.640e-84	70.17	Uncharacterized protein n=4 Tax=Peronosporaceae Ta...	[more]
D0NMU9_PHYIT	6.360e-84	69.61	Rab18 family GTPase, putative n=6 Tax=Oomycota Tax...	[more]
K3WMM1_GLOUD	9.340e-84	69.61	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
A0A024TX33_9STRA	6.250e-82	69.40	Uncharacterized protein n=2 Tax=Aphanomyces TaxID=...	[more]
A0A485LUC0_9STRA	1.080e-81	72.89	Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 8..24 score: 33.63 coord: 26..48 score: 48.94 coord: 91..104 score: 45.47 coord: 124..146 score: 36.07
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..149 e-value: 5.6E-10 score: 26.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 1..179 e-value: 0.0016 score: 1.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 1..149 e-value: 3.9E-10 score: 10.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..149 e-value: 3.3E-72 score: 255.9
None	No IPR available	GENE3D	3.40.50.300		coord: 1..156 e-value: 4.7E-53 score: 181.2
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..169
None	No IPR available	PANTHER	PTHR24073:SF1064		coord: 1..169
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..181 score: 29.938
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 3..142 e-value: 3.8E-20 score: 70.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..147 e-value: 8.7E-49 score: 165.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..152

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig11176	contig	M-pyrifera_M_contig11176:604..6867 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig11176.2455.1	mRNA_M-pyrifera_M_contig11176.2455.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig11176 604..6873 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig11176.2455.1 ID=prot_M-pyrifera_M_contig11176.2455.1|Name=mRNA_M-pyrifera_M_contig11176.2455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLT
SSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGN
KVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNP
SLLANTAPGRPRSTIDPAGPSTNEGGGGLCCG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase