mRNA_M-pyrifera_M_contig11176.2455.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11176.2455.1
Unique NamemRNA_M-pyrifera_M_contig11176.2455.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.040e-119
Identity = 171/184 (92.93%), Postives = 179/184 (97.28%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCCG 552
            S+MLRFTDDTFDDHLQSTIGVDFKVKMVDA GKRIK+TIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEV+QK+LDNPSLLANTAPGRPR T+DP+ P+ N+ GGGLCCG
Sbjct:   27 SIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPNQAGGGLCCG 210
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA)

HSP 1 Score: 273 bits (699), Expect = 4.180e-91
Identity = 137/182 (75.27%), Postives = 157/182 (86.26%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLC 546
            S+MLRFTDD+FDD LQSTIGVDFKVKM++   K+IK+TIWDTAGQERFRTLTSSYYRGAQGIMLVYDV RPETFDNL+KWLEEVETYHPGRGR+VVKLLVGNKVD  R V R QAE +ARSKGMLFLEASAKT+VG++Q FEEV+ K+L++P+LLANT PG+PR+    A  +T   G G C
Sbjct:   25 SIMLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVERPETFDNLNKWLEEVETYHPGRGRDVVKLLVGNKVDCPRAVPREQAEAWARSKGMLFLEASAKTEVGIRQAFEEVVHKILESPALLANTTPGKPRTVDLAATQNTPPSGAGGC 206
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 264 bits (675), Expect = 2.080e-87
Identity = 135/188 (71.81%), Postives = 157/188 (83.51%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRS-----TIDPAGPSTNEGGGGLCC 549
            S++LRFTDDTFDDHLQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ETF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R + E +ARSKGMLF+E+SAKTK+G++QVF EV+QK+LDNP+LLANTAP R R+     + D   P  N GGG  CC
Sbjct:   27 SMLLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVARKETFENLGTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAP-RSRAKKVNLSADKYAPHANAGGG--CC 211
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A4D9D7L4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L4_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.580e-87
Identity = 131/183 (71.58%), Postives = 154/183 (84.15%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 549
            S++LRFTDD FDDH QSTIGVDFKVKM++   KRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R E+F+NL+ WL+EVE Y  G GRE+VK+LVGNKVDKER+V R +AE +ARSKGMLFLEASAKT+ G++QVF EV+QK+LDNPSLL NTAPGRPR  +     +  +G GG CC
Sbjct:   27 SILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPRVNLQ--ADAAAKGSGGYCC 207
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 260 bits (664), Expect = 2.760e-85
Identity = 128/183 (69.95%), Postives = 156/183 (85.25%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 549
            S++LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL+NTAP      +D  G +   GGG  CC
Sbjct:   62 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRNRGRKLD--GKAEKSGGGSGCC 242
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A6G0KMK3_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0KMK3_9STRA)

HSP 1 Score: 260 bits (664), Expect = 4.830e-85
Identity = 128/183 (69.95%), Postives = 156/183 (85.25%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 549
            S++LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL+NTAP      +D  G +   GGG  CC
Sbjct:   79 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRNRGRKLD--GKAEKSGGGSGCC 259
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 257 bits (657), Expect = 8.410e-85
Identity = 127/183 (69.40%), Postives = 155/183 (84.70%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 549
            S++LRFTDDTFDD+LQSTIGVDFKVKM+   GK+IK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL+NTAP      +D    +   GGG  CC
Sbjct:   22 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRSRGRKLDAK--AEKSGGGNGCC 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: K3WMM1_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WMM1_GLOUD)

HSP 1 Score: 257 bits (656), Expect = 1.240e-84
Identity = 127/183 (69.40%), Postives = 153/183 (83.61%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTIDPAGPSTNEGGGGLCC 549
            S++LRFTDDTFDD+LQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  G++VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EV+QK+L+NP+LL  T P R       +G     GGGG CC
Sbjct:   22 SMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGKDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLGTTRP-RTNDRATLSGKDGKSGGGGGCC 203
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A024TX33_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TX33_9STRA)

HSP 1 Score: 253 bits (646), Expect = 8.270e-83
Identity = 128/185 (69.19%), Postives = 153/185 (82.70%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTID--PAGPSTNEGGGGLCC 549
            S++LRFT+DTFDDHLQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R + E +ARSKGMLF+E+SAKTK G++QVF EV+QK+LDNP+LL+NTAP    + +D   A P+ + G    CC
Sbjct:   44 SMLLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFANLDTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRREGEAWARSKGMLFVESSAKTKTGIQQVFNEVVQKILDNPTLLSNTAPKSRVAKLDLADARPAASSG----CC 224
[Close]
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Match: A0A485LUC0_9STRA (Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LUC0_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.430e-82
Identity = 122/168 (72.62%), Postives = 145/168 (86.31%), Query Frame = 1 
Query:    1 SLMLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNPSLLANTAPGRPRSTID 504
            S++LRFT+DTFDDHLQSTIGVDFKVKM+   GKRIK+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EV+ Y P  GR+VVKLLVGNK+DKER V+R + E +AR+KGMLF+E+SAKTK G++QVF EV+QK+LDNPSLL+NTAP      ID
Sbjct:   27 SMLLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDTWLQEVQVYSPANGRDVVKLLVGNKIDKERAVSRKEGEAWARTKGMLFVESSAKTKTGIQQVFNEVVQKILDNPSLLSNTAPKSRAKKID 194
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11176.2455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G245_ECTSI1.040e-11992.93Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YPZ0_9STRA4.180e-9175.27Rab18, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A067C8B0_SAPPC2.080e-8771.81Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A4D9D7L4_9STRA2.580e-8771.58Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6A3N672_9STRA2.760e-8569.95Uncharacterized protein n=21 Tax=Peronosporaceae T... [more]
A0A6G0KMK3_9STRA4.830e-8569.95Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
D0NMU9_PHYIT8.410e-8569.40Rab18 family GTPase, putative n=6 Tax=Oomycota Tax... [more]
K3WMM1_GLOUD1.240e-8469.40Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A024TX33_9STRA8.270e-8369.19Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A485LUC0_9STRA1.430e-8272.62Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11176contigM-pyrifera_M_contig11176:604..6873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.2
Seed ortholog evalue2.3e-93
Seed eggNOG ortholog2880.D7G245
Preferred nameRAB18
KEGG koko:K07910,ko:K07976,ko:K17506
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001654,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005783,GO:0005789,GO:0005794,GO:0005829,GO:0005886,GO:0006810,GO:0006887,GO:0006913,GO:0006955,GO:0006996,GO:0007029,GO:0007154,GO:0007165,GO:0007264,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0008092,GO:0008150,GO:0009790,GO:0009792,GO:0009987,GO:0010256,GO:0012505,GO:0012506,GO:0016020,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017022,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0023052,GO:0030141,GO:0030659,GO:0030667,GO:0030742,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032029,GO:0032036,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032940,GO:0034389,GO:0035556,GO:0036094,GO:0036230,GO:0042119,GO:0042175,GO:0042579,GO:0043009,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0046907,GO:0048513,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060322,GO:0065007,GO:0071782,GO:0071786,GO:0071840,GO:0071944,GO:0080115,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:0099503,GO:1901265,GO:1901363
EggNOG free text desc.myosin XI tail binding
EggNOG OGsKOG0080@1,KOG0080@2759
Ec32 ortholog descriptionRab18, RAB family GTPase
Ec32 orthologEc-09_003840.1
EC3.1.3.16
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko04031,ko04131
Exons5
Model size555
Cds size549
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11176.2455.1prot_M-pyrifera_M_contig11176.2455.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11176 604..6867 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815630.8185818-CDS-M-pyrifera_M_contig11176:603..7691622815630.8185818-CDS-M-pyrifera_M_contig11176:603..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 604..769 -
1692277495.955376-CDS-M-pyrifera_M_contig11176:603..7691692277495.955376-CDS-M-pyrifera_M_contig11176:603..769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 604..769 -
1622815630.8331642-CDS-M-pyrifera_M_contig11176:2410..25171622815630.8331642-CDS-M-pyrifera_M_contig11176:2410..2517Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 2411..2517 -
1692277495.9680262-CDS-M-pyrifera_M_contig11176:2410..25171692277495.9680262-CDS-M-pyrifera_M_contig11176:2410..2517Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 2411..2517 -
1622815630.8513663-CDS-M-pyrifera_M_contig11176:4774..48631622815630.8513663-CDS-M-pyrifera_M_contig11176:4774..4863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 4775..4863 -
1692277495.9775696-CDS-M-pyrifera_M_contig11176:4774..48631692277495.9775696-CDS-M-pyrifera_M_contig11176:4774..4863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 4775..4863 -
1622815630.8645372-CDS-M-pyrifera_M_contig11176:6115..62361622815630.8645372-CDS-M-pyrifera_M_contig11176:6115..6236Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 6116..6236 -
1692277495.9969978-CDS-M-pyrifera_M_contig11176:6115..62361692277495.9969978-CDS-M-pyrifera_M_contig11176:6115..6236Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 6116..6236 -
1622815630.8792012-CDS-M-pyrifera_M_contig11176:6801..68671622815630.8792012-CDS-M-pyrifera_M_contig11176:6801..6867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 6802..6867 -
1692277496.010734-CDS-M-pyrifera_M_contig11176:6801..68671692277496.010734-CDS-M-pyrifera_M_contig11176:6801..6867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11176 6802..6867 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815630.8934278-UTR-M-pyrifera_M_contig11176:6867..68731622815630.8934278-UTR-M-pyrifera_M_contig11176:6867..6873Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11176 6868..6873 -
1692277496.020267-UTR-M-pyrifera_M_contig11176:6867..68731692277496.020267-UTR-M-pyrifera_M_contig11176:6867..6873Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11176 6868..6873 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11176.2455.1

>prot_M-pyrifera_M_contig11176.2455.1 ID=prot_M-pyrifera_M_contig11176.2455.1|Name=mRNA_M-pyrifera_M_contig11176.2455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
MLRFTDDTFDDHLQSTIGVDFKVKMVDAAGKRIKITIWDTAGQERFRTLT
SSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGN
KVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVIQKVLDNP
SLLANTAPGRPRSTIDPAGPSTNEGGGGLCCG*
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mRNA from alignment at M-pyrifera_M_contig11176:604..6873-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11176.2455.1 ID=mRNA_M-pyrifera_M_contig11176.2455.1|Name=mRNA_M-pyrifera_M_contig11176.2455.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6270bp|location=Sequence derived from alignment at M-pyrifera_M_contig11176:604..6873- (Macrocystis pyrifera P11B4 male)
AGCCTGATGCTGCGCTTCACCGATGATACGTTCGACGACCACCTGCAGAG
CACGATCGGAGTCGACTTCAAGGTGCGTCGGGGTCGGGCTTGCTGAACTG
TCAGTCCAAGTCGGCTATTTTTTTCTGGTCGGTTCGTGATTTTGACGCTG
GCTTCTCCCGTGCTTGATCGATTGATTGGTTGATTGATCGGTCAGTTGAT
TGGTTGATTGGCTGGTTGGTTGGTTGGTTGGTTGGTTGATCGATCGATGT
ATTGCTTGATTGATTGATGATGATTAACTGCTCCCTTGCTTCCTTCCTTG
CTTGTTGTTGCTTGCTCTTGCTTTCAAATCTCTTGAAAAAATCTCTTGTG
TTTTGCTTGCACTTGTTTGTGCCTTGCGTGGCATCTCGATGTAGTTTCTA
TTCGTGGTTCCTTGTTTTTCCGGTGCTTGCTCGTCTTCTAAGTCATTACA
GCTATAAATTTCCTTCCGAGGACAAGCGGTTGTTATCTCGTTTCCGTGCA
TAAAACATGTTCATATTTTTTAATTTGGTTGCCGTACGTACATGAAACGT
TTTTTGTTTGACTGCAGTAGTGCGTAAAGCGTTTGCCTGCTGGTTGCTGC
GCATTAAACGTTGTTGTGTTCGGTTGCCGTATTATAGGTGAAAATGGTGG
ACGCCGCAGGCAAGCGGATAAAAATCACCATCTGGGACACCGCAGGGCAG
GAGCGCTTCCGAACACTGACCAGCTCCTACTACCGAGGAGCGCAGGGGAT
CATGCTCGGTAAGAGAAAACTTGACAAAAAAAACATCGGTATATAGCATT
CAGAAAATACCCCCGTGCCATTTTTCGATGGGAGGGGCGCTTTGCCACCG
CGTACAGGTCGGCTTTGAGAGCAGCGTCCTGGCTCGTTTTGTTGTGCGGA
GGGGGAGAGGACGGGGAAGGGAGTGCGGGTGGAAGGCGCCTGGGGGAGGG
AGTACTTATGTCATGCATGGGCGTGGTCGTATGACCATAACCCTCGCATC
CGGAGGGAGGAGAGATAGGGGAGGGGCGGGCGGGGGTCCCCTCCCGTCTT
GGAGCGTAGTCGGTGCCCGCGCGACTACGGCCGTGCGTCGTATGACCATA
ACCCTCGCATCTGTCTCTATCGCGAGGGCGTGCTTGCGTTTGGCTTCGTT
GCGAGGGCTACCGGACGGAAAAAAACGCCTGTCTAGTCGAGGCGTGTCTC
TCGTGTCGGTTTTCCGCCCGCCGGGTCCGTTTTGCGAAGATGCGCTGTCG
TGGAGCGTGTTGGGATGTGGGCTGCCGTGGGTTCTTGCTGTCCGTCAACG
CCGACCGTGATGCCGCGGCTGCTTCTGAAAGGTTAGGGTTGGAATACCCG
GAGTGTTGCGCGTTTCCACTGCGGGGGAACGCAGTAATCAGAACCTATTA
CTGTTGGTAAAAATAGTCAAATATATAGGTTTTTATGTATTCCATAGGTC
CTATCAACTATGGACCCCTGTCATAGTACGAGGTGTAAACATGCGGGAAT
ATCTACCAGTATATATGGTCTTTGTGTCCGTCGTTGGGGCTGACTAGTAT
AGTAATAGTCAGGGTTGGGAGGTTGCAGAAGATAAGTTGGCTTTGTGCTG
AGAGCGACCACCCCTGCCTCGCTGCTTCCTTCCCTCCCTCCCCCCCTCTA
TCCTCTGCGGTGATGGGTATCCCTTTATAATTGCGCATTCGTGGACGATT
TACGTCGAGGGGCTCGGTTTTATGACCGTTTCTTCGTCATAGGAGTGTTT
GAGCTGCGGAGGCGACAGCGACAGCCCTCTCTACCCCCCTCCTTCCGCCC
TCCTCCCTCCTCCTCTCTCTGCTGATACTCGTGGTCATATGTTTGTGCAT
TTGATATTGTTGGAGGAGGGCTACCTCGGGGTCTCGGTTTCGTTGCCCTT
CTTCGCCATATAGGAGTGATGAGGTGTTGGAGGCGTTTTCTCGAGCCAGG
ACCGTTTTGGTTTGTCCTGCGTACGTATAACCTGTCTGTCCGCTTCGTTT
CTTTGTCCAGTTTACGACGTGACGCGACCGGAGACGTTCGACAACCTGTC
CAAGTGGCTAGAGGAGGTGGAGACGTACCATCCGGGCAGAGGGCGCGAGG
TAAGCACGTATTAATTCTGGTGTTGGGTGCCCTATCGTGAGCTCCGGTAT
GTATATATCGAGAATTCGATATATCCTGTCGAAAAAATATTATCGTATCG
AAAGTTTCGATCATTTTTAATCAAACTTTCGATTTATCGTATCGAATTTT
TCGAAAAACATCGATGTTTTGATATATCGTGTCGAAATATTCGATACCAC
TCTGCCCCGAAATATAATAACCGTTTGGTTTAACACTTAGTGTAAAAAAG
TTGATTATATTATGGGACGGAGCGGTATATGGGAAAGTCAAAAATATCGT
TTTGAGATACTCTTGTTTTTGGGCCAGTTTTTGGCCAGGCTCGATTTTTT
CTGTGCATTAGGGTGTGTGTGTCCTACGCTGATTTCAGTATCAATCAATG
GATTTTGCCTGGTAATTTCCGAAACGTAATTTGACTTGCTCGTGGTAGAT
CATTCTGCTTCTAGATCCTCGTCACTTCCTCCTTCGGTATCATCCCAAGT
CCCTCTAATGCCGGCCGACGTCGCACAGGGGACGCTGCACTAGCCTGTTT
ACGCCTCTGACGTGTTTCCTTTTTATACGCGTCCGCGATGTCTGTGTACA
TTGCCTGGACCTCCCGGCTAATTTTTAATCGGCTGGCGATGCCAAGGAAG
CCCGAATACATTAGTAGAGGTCCCCCGGTAGAAGGTGATGATGTGCCAGA
GCAATGTGACCGTCTTTACTGAGGCAAGCCGCGTTGTTCATTCCAGCTTA
TGAGTGCAATTTTCCACTCGCTCGAATTGGTTTCGACCGCCTTGCATCGG
GATACCGCCTTATTCAGACCGCTCTGCGTGTGTAGCCAATGAAATGCCTA
GCTGGCGACTTTCAACCGTTCAACTCACAGACCTACCATAGTTTCAGTGC
CCATGATGTGGGTTTATCATGTGTGGCACCAATTACGTGTTTTTAGGGGG
GGGGTGTATCGTCGACGTTGTATTTAGGCGTCTGACAACAGTCGAGCTGA
AATCTCGTCGCTTTCAATTTTTTGCCAGGTGAGTGCTGTCGCGTGTCTGG
TATGTGGTGTGTCCTAGTCCTATTACGGGGAGCCATAGTAAACAGGACCA
AATATTGTTAGTAAAAATACCTAAATATATAGGTTTTTTATGTACGCCAT
AGGTCCTGTTAACTATGGACCCCCGTAATAGTACCGGCGCCGGGTTGTCC
GGCGACGTTGCCTTTTCGTGTCTCGAAGTTCCGGCGACGTTGCCTTTTCG
TGTCTCGAAGTGGAAGCTGCTTGTCGGAGGAGCTGCGCTGAGTTTGCGAA
CACTACTACTGTTTTAAACCCTAGCTAGCCTAAACCTAACCCCGACCGCC
TGCATGTAATGAGGAAATTGTGGGGTAGCAACCATTGTAATCTCAGAGCT
AGTGCGGACAAATCGGCGTTTGTTTTTGTAAGCTTGATGGAAGGCAACCC
CCTGAGATGAGATCGAGAAACTTTCGTTGAAATCGGACGTCATATTCCCA
GGCTGCGTGTGAAGTATCCTTGAATAATATCAAAGATGCTCCTCGACTGT
GATGATATCGACCATTTCGTCGAAATAGGACATCACTTTTGCAAGCTGCG
TGCGGTCTATATATGTGTATGATACGAGGTCAACCATGCTGTCCAAGCTG
GGCTAAATTCGTACCGGCTAGTGTTGGATATCGGACGATAATCGAGTTCG
ATACGATACCGATAAACGATAATCGAGTTCGATACGATACCGATAGACGG
TAGTCGAGCTCGATACGATACCGAGTAATGACATTCGAGTTCGATACGAT
ACCGGTAAACGATGCTCGAATTCGATACAATGGCGATAAACAATAATTGA
GTTCGATGGAATACCGATAAACGATACTCGAGTTCGATACGATACCGATA
AACGATAATCGAGTTCGACAAAATACCGATAAACGATCGAGTTCGACAAG
ATACCGATAAGAAAAATTCTGATCGATACGTACGATTTCGGGATTTGATA
CAATCGAAGCTTTCGTTCAGTGTCAGCTTAGAAATGTGGAGGGTGCCAGG
GGATGAAAGGCTTGGTAACACGTTCCATATTTCTCGATACATCGAAACTT
TTGAGGTTTCGATAGAGAGAAACTTTTCCTTACCTGGTATCCAACCTTAG
TACCGGTGCGTGGTATTAAACACTGCTGCTGTACGGGTTTGTCTGTCGGT
CTGTCTGTCTGGTGGCCCCACCTCTTCGTGTGTTTTTATGTGTATGTTTC
ATTCAGGTGGTCAAGCTGCTTGTCGGGAACAAGGTGGACAAGGAGAGGGT
CGTTACGCGCGCGCAAGCTGAGGAGTACGCGCGCAGCAAGGGTATGCTCT
TTTTGGAGGCTAGGTGCGTCTTTCCCACACCGTGCAACGTTCTATTCCCC
CCCCCCACCCCCACCCCCCACCCCCCGGAAAAAAGTGTCCCAATTCATCG
TGCAAACATTTAACACAACGGACAGACAGACGACGACCTACAGTGGATCA
TCTAAACCCCGGACAGATCATACAGATCACGATCTATCTGATCTATCTAC
AGATGGATGATCTAGTTCCGCACTTCCCGTTGTAAGAGGTTTTGCAGGAT
CTGGATAGTACAGATCTAACCCAGGAAACATGTGCTACGAACGAGCGTGC
AGATTCTACGGCGCCCACCCGGCAACATGAGCTAGATCATACAGATCATG
CGGGTGCGGAATAGATTATTTAGCTGCCCTGAAAGGTATAGATCACCAAG
TGGACATGATCTGTACATGATTTTTAGATGTTTTTCAGATGATATGTACA
AGTACATGATATGTAGATGATTTGTAAGTGATCTGTAGGTGATCTGTAAA
TGATCTGTAGATGATCTGTAAATGATCTGTAGATGATCTGTAAATGATCT
GTAGATGATCTGTAAATGATCTGTAGATGATCTGTAAATGATCTGTAGAT
GATCTGTAAATGATCTGTAGATGATATGTCCGAGGTGTGAAACGTTTTGG
GTTATGAGAGTCTGTGCAGGATCTGCCCATAGTACAGATTCAACCCCAGG
AAACGTGTGCCATGGGTCAAGCAGATTGTACGGCTTCTGGCCAGCAACTT
GATGAGCTATGGTAGGTCATCCTTCTTATCCGGAATGCATCTGTATTCCC
CCGAAATGTCTACGTAAGATATCGTCAAGTGGGGATCGGTGATGTGTCCT
GCGTGTGCAACCTTCGTTTTGCGAAAGTGGCCAGCCGCTCCGTGACGTGG
GGATAGCTTTCGTGCGGGGCTCGTGGAGTTCTAGATGCGCCGCTGTGCTC
GCTCGCTTTACAGTAGTAGGGTGTGGGGCTACCTGTGGTTTATCCGGCTG
AGCCAATGAGAGCTCGTGGCGCCTCGGTACCAGCCGCAAGCTGCACGCGG
CACCATGCTGACGATGGTTGTCGGATTGTCCCGAGAGATACAGCCCGGTC
GTATATTGATATTTGATCAAAGTGGTCCTCACATTTTTAGACAGAGCGGT
GCCGGGTGGGTACATATTACGGGGGACCACGGTGAGTAGGACCAGATGTT
AGTAAAAATATTGAAATAGATAGGTTTTTAAGTAAACCATAGGTCCTATT
AACTATGGCCCCCCGTAATATGAATACGCGATACGTAAAAAGCGTAGGAG
GGAAATCGGGCGGTCTTTTTTTTTTTCGTTCGCTGCTATAGCTTATGATT
GCTCGGCAGAATGGCAGATGAGATGGCAAGGGGCTGGGGGGCAGTCCCAC
TTCCGCGACATTTCCGACTTTTTGTTTTTTGGTGTTTTCTTATCTACGTG
GGGCAACGGAAGATAACGTGCACGAAACGCCCCCCTCTTCCCCCCCCCCT
TCCTTCCTTCCTTCCTTCTCTTTCGCCCCCTTCCTCCCCCCTCCCCCCTC
TCCCACAACCCCCTCCTCCCTCCCTCCTCCCGCCTCCCTCGTCCTGCCTC
CACCTTCCTCCCTCCTCCTCCTCCACTTGTATTGCCCGCATGTTTTGTGC
ACAGTGCAAAGACAAAGGTCGGGGTAAAGCAGGTGTTCGAGGAAGTTATC
CAGAAAGTTCTGGACAACCCGAGTCTTCTTGCCAACACCGCTCCCGGTCG
ACCGCGAAGCACGATCGATCCCGCCGGACCCAGCACAAACGAGGGCGGGG
GGGGGCTTTGCTGCGGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11176:604..6873-

>mRNA_M-pyrifera_M_contig11176.2455.1 ID=mRNA_M-pyrifera_M_contig11176.2455.1|Name=mRNA_M-pyrifera_M_contig11176.2455.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1098bp|location=Sequence derived from alignment at M-pyrifera_M_contig11176:604..6873- (Macrocystis pyrifera P11B4 male)
ATGCTGCGCTTCACCGATGATACGTTCGACGACCACCTGCAGAGCACGAT
CGGAGTCGACTTCAAGATGCTGCGCTTCACCGATGATACGTTCGACGACC
ACCTGCAGAGCACGATCGGAGTCGACTTCAAGGTGAAAATGGTGGACGCC
GCAGGCAAGCGGATAAAAATCACCATCTGGGACACCGCAGGGCAGGAGCG
CTTCCGAACACTGACCAGCTCCTACTACCGAGGAGCGCAGGGGATCATGC
TCGGTGAAAATGGTGGACGCCGCAGGCAAGCGGATAAAAATCACCATCTG
GGACACCGCAGGGCAGGAGCGCTTCCGAACACTGACCAGCTCCTACTACC
GAGGAGCGCAGGGGATCATGCTCGTTTACGACGTGACGCGACCGGAGACG
TTCGACAACCTGTCCAAGTGGCTAGAGGAGGTGGAGACGTACCATCCGGG
CAGAGGGCGCGAGTTTACGACGTGACGCGACCGGAGACGTTCGACAACCT
GTCCAAGTGGCTAGAGGAGGTGGAGACGTACCATCCGGGCAGAGGGCGCG
AGGTGGTCAAGCTGCTTGTCGGGAACAAGGTGGACAAGGAGAGGGTCGTT
ACGCGCGCGCAAGCTGAGGAGTACGCGCGCAGCAAGGGTATGCTCTTTTT
GGAGGCTAGGTGGTCAAGCTGCTTGTCGGGAACAAGGTGGACAAGGAGAG
GGTCGTTACGCGCGCGCAAGCTGAGGAGTACGCGCGCAGCAAGGGTATGC
TCTTTTTGGAGGCTAGTGCAAAGACAAAGGTCGGGGTAAAGCAGGTGTTC
GAGGAAGTTATCCAGAAAGTTCTGGACAACCCGAGTCTTCTTGCCAACAC
CGCTCCCGGTCGACCGCGAAGCACGATCGATCCCGCCGGACCCAGCACAA
ACGAGGGCGGGGGGGGGCTTTGCTGCGGGTGATGCAAAGACAAAGGTCGG
GGTAAAGCAGGTGTTCGAGGAAGTTATCCAGAAAGTTCTGGACAACCCGA
GTCTTCTTGCCAACACCGCTCCCGGTCGACCGCGAAGCACGATCGATCCC
GCCGGACCCAGCACAAACGAGGGCGGGGGGGGGCTTTGCTGCGGGTGA
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