prot_M-pyrifera_M_contig111754.2453.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111754.2453.1
Unique Nameprot_M-pyrifera_M_contig111754.2453.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length40
Homology
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BLAST of mRNA_M-pyrifera_M_contig111754.2453.1 vs. uniprot
Match: D8LG49_ECTSI (Succinate dehydrogenase assembly factor 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG49_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 4.670e-7
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:    1 GQVGLSLSEDDVAHLNDEQRAQLFRLKQQTSATP 34
            GQVG SLS  DV+HLNDEQR QL RLKQQ S++P
Sbjct:   72 GQVGRSLSAADVSHLNDEQRKQLVRLKQQASSSP 105
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111754.2453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG49_ECTSI4.670e-773.53Succinate dehydrogenase assembly factor 3 n=2 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111754contigM-pyrifera_M_contig111754:297..416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111754.2453.1mRNA_M-pyrifera_M_contig111754.2453.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111754 297..589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111754.2453.1 ID=prot_M-pyrifera_M_contig111754.2453.1|Name=mRNA_M-pyrifera_M_contig111754.2453.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=40bp
GQVGLSLSEDDVAHLNDEQRAQLFRLKQQTSATPEGGNV*
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