prot_M-pyrifera_M_contig111638.2423.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111638.2423.1
Unique Nameprot_M-pyrifera_M_contig111638.2423.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length130
Homology
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BLAST of mRNA_M-pyrifera_M_contig111638.2423.1 vs. uniprot
Match: F1KUB8_ASCSU (Breast carcinoma-amplified sequence 3 n=1 Tax=Ascaris suum TaxID=6253 RepID=F1KUB8_ASCSU)

HSP 1 Score: 53.1 bits (126), Expect = 1.640e-5
Identity = 35/130 (26.92%), Postives = 59/130 (45.38%), Query Frame = 0 
Query:    3 VLVVNDAGILTHFQLAPEPTKLPNGGYGKEL--VVHSKRRLEWDV---CRKK---TWPTTTVPMEVAFRRDLARSGDCVL---GQAPAEETAEFLPSLHETRWLTQLEMATYGDDFKPLYSIPKFHFKKF 121
            +LVV D G+LT + L   P ++P+         V  +  RL W+    C+ +   +W        +  R  +A S   ++        EE    L      +W+TQ+E+ TYG+  + L++ P+F FK F
Sbjct:  635 LLVVGDDGVLTEYSLEVTPAQIPHPAAASPATAVTGAHPRLTWESPIQCQLRANASWQLQRCKSSLDVRAPVAESNPLLVWLNASNKIEECKMNLEGERNEKWITQIEVLTYGEPHRRLWTGPQFTFKTF 764
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111638.2423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
F1KUB8_ASCSU1.640e-526.92Breast carcinoma-amplified sequence 3 n=1 Tax=Asca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111638contigM-pyrifera_M_contig111638:69..458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111638.2423.1mRNA_M-pyrifera_M_contig111638.2423.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111638 69..458 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111638.2423.1 ID=prot_M-pyrifera_M_contig111638.2423.1|Name=mRNA_M-pyrifera_M_contig111638.2423.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
NGVLVVNDAGILTHFQLAPEPTKLPNGGYGKELVVHSKRRLEWDVCRKKT
WPTTTVPMEVAFRRDLARSGDCVLGQAPAEETAEFLPSLHETRWLTQLEM
ATYGDDFKPLYSIPKFHFKKFQPDTDPAAD
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