prot_M-pyrifera_M_contig111632.2421.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111632.2421.1
Unique Nameprot_M-pyrifera_M_contig111632.2421.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length111
Homology
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BLAST of mRNA_M-pyrifera_M_contig111632.2421.1 vs. uniprot
Match: C1MJB7_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MJB7_MICPC)

HSP 1 Score: 48.5 bits (114), Expect = 8.480e-5
Identity = 29/77 (37.66%), Postives = 44/77 (57.14%), Query Frame = 0 
Query:    3 ALLAAVKIGNAGMVKACIAHNANINCRDETGATPLLCAAELGSYEVGKLLCDSGCDCSAVDQHGEGALLKASKKGHL 79
            ALL A    +A  ++  +A  A I CR E+GATP++CAA  G+    + L D+G D +AVD+ G   +  A+  G +
Sbjct:    1 ALLLASLGDDAKTIRELLARGAWIECRTESGATPVICAASKGAGMALEALLDAGADITAVDKVGANVVHLAAHNGRV 77
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111632.2421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
C1MJB7_MICPC8.480e-537.66Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..90
e-value: 1.9E-19
score: 71.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..80
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 3..62
e-value: 1.8E-7
score: 31.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..84
score: 18.51
NoneNo IPR availablePANTHERPTHR24188:SF29coord: 3..79
NoneNo IPR availablePANTHERPTHR24188ANKYRIN REPEAT PROTEINcoord: 3..79
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 32..64
score: 9.511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111632contigM-pyrifera_M_contig111632:1..333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111632.2421.1mRNA_M-pyrifera_M_contig111632.2421.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111632 1..333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111632.2421.1 ID=prot_M-pyrifera_M_contig111632.2421.1|Name=mRNA_M-pyrifera_M_contig111632.2421.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp
SAALLAAVKIGNAGMVKACIAHNANINCRDETGATPLLCAAELGSYEVGK
LLCDSGCDCSAVDQHGEGALLKASKKGHLLFLRLPWEVKDFEMDLGSPSV
QVDTPWEVCAI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt