mRNA_M-pyrifera_M_contig111631.2420.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A7S4MGI3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MGI3_9EUKA) HSP 1 Score: 183 bits (464), Expect = 5.610e-55 Identity = 101/195 (51.79%), Postives = 139/195 (71.28%), Query Frame = 1
Query: 1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGG-VHGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLEC 582
+EL P KEKPDVWI+P SR+LQVKAAQ+VP+EKF + FTLRFPRVQK+RLDK W D++D L+ + K+ G+ SR+ KKKRK V ++ +TV FQ+A T + + +++F KE+C++ G H KA+LERIA +HGA+RVQYP+D+T VV +K TL+V N++E+G FDIVKP+W+L C
Sbjct: 28 IELMPPCKEKPDVWIDPKNSRILQVKAAQIVPTEKFVTRFTLRFPRVQKLRLDKNWYDAMDSKE-LQQITKH-GRTSRR--ISEIDKEQPPKKKRKTVNTRRSLTVLQQFQQADTKDLSIIAALFQNKEICILSGDDSHSKADLERIAFQHGASRVQYPTDATDIVVAEKKTLRVSNIIETGGFDIVKPIWILTC 218
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI000C6DBC4A (DNA ligase 4-like isoform X1 n=4 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DBC4A) HSP 1 Score: 152 bits (384), Expect = 3.130e-39 Identity = 88/196 (44.90%), Postives = 126/196 (64.29%), Query Frame = 1
Query: 7 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQ--TKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
LAPGHKEKPDVWI+P S VLQVKAA++ S++FK+G +LRFPRV+KIR DK+W+ L + LE + K G RY D + KKRKV+++ TVA FQ A + ++V+S +F KE CV+ G H K LE++ ++G Q P +T+CV+ DK+TLK KN++ ++++VK WLL+C+
Sbjct: 531 LAPGHKEKPDVWIKPENSAVLQVKAAEITQSDQFKTGCSLRFPRVEKIRYDKSWNQCLTLSE-LENLRKEGGGKLAGRYCTITTDQNYEISPKKRKVILTSVKPTVAPHFQPADISDIKVKSHMFEEKEFCVINGPPSHSKHTLEKLIAEYGGNITQNPGMNTFCVIVDKVTLKAKNIIAKKQYNVVKVTWLLKCI 725
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI001CF5AFC9 (DNA ligase 4-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5AFC9) HSP 1 Score: 152 bits (383), Expect = 4.300e-39 Identity = 84/195 (43.08%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 7 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVT-VAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
LAPG+KEKPDVWIEP+KS+++QVKAA+++ S+KFK+G TLRFPRV+ IR DK W + L + +L + +G+++ + + A +K+RK V VT VA F+ A + V+ S +F GKE C++ G H KA+LE+ ++G + Q PS TYCV+ ++I ++VKN++ KFD+V+ WL++C+
Sbjct: 543 LAPGYKEKPDVWIEPTKSKIVQVKAAEIIASDKFKTGVTLRFPRVEAIRKDKMWYECLSSTELEKLKSMAEGKLTYQ-HTNAEHSHEPARKRRKGVTRNERVTSVAEHFKPADLSSVEQVSQLFEGKEFCIVTGPASHPKAKLEKKVAENGGSCTQNPSAETYCVIAERINVRVKNIISQKKFDVVQASWLIQCL 736
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI001E1D563F (LOW QUALITY PROTEIN: DNA ligase 4-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D563F) HSP 1 Score: 152 bits (383), Expect = 4.300e-39 Identity = 86/196 (43.88%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGVH-GKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
+ELA G KEKPD WIEPSKS ++Q+KAA+++ S++F++GFTLRFPRV+K R DK W D + V +L K G+++ Y + + KKKRK+V T+ F+ A T+ VQ S + G+E+CV+ G K ELE+ + G T VQ P TYCVV +KI +V N+++S +DIVK WL+ C+
Sbjct: 540 IELASGFKEKPDAWIEPSKSAIVQIKAAEIIDSDRFRTGFTLRFPRVEKFRDDKEWYDCMTVEEVEQLKQKSGGKLTGG-YVELGEEQEPAKKKRKIVSRAVRPTLGSQFRAADTSSVQQVSKLLEGREICVINGPSSCSKQELEKKIVECGGTVVQNPGIDTYCVVVEKIVFRVNNMIKSNHYDIVKAEWLIRCL 734
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A6P8J0X6_ACTTE (DNA ligase 4 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8J0X6_ACTTE) HSP 1 Score: 150 bits (378), Expect = 1.940e-38 Identity = 81/197 (41.12%), Postives = 127/197 (64.47%), Query Frame = 1
Query: 1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVS-KAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
+ LAPG KEKPDVWIEPSKS+++Q+KAA+++ S+++K+G TLRFPR++ IR DK W + LD + +L +G+++ + + G T+KKR+V + TVA F+ A + V S +F GKE C++ G KA+LE+ +HG T Q P TYCV+ +++ L+V N+++ K D+VK WL++C+
Sbjct: 487 IALAPGFKEKPDVWIEPSKSKIVQIKAAEIIASDRYKTGSTLRFPRLECIRDDKHWYECLDLKELEKLRTMAEGKLTYQ-HTDMDGTSEPTRKKRRVAARVEQPRTVAAHFRPADVSSVTEVSKLFAGKEFCIINGPTSEPKAQLEKKVVEHGGTFTQNPGPETYCVIAERVNLRVNNIIKDAKHDVVKASWLIDCL 682
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A6B2KXJ9_9EUKA (DNA ligase 4 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXJ9_9EUKA) HSP 1 Score: 150 bits (378), Expect = 1.960e-38 Identity = 78/194 (40.21%), Postives = 126/194 (64.95%), Query Frame = 1
Query: 7 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGG-GVHGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
LA K+KP++WIEP S+VL+VKAAQ+V S+K+K+G+TLRFPRV KIR DK + + + ++ + ++G+++++ + + + + K+K+K ++ K VA F+ A T+ ++VE +F E CVM G K ELE + H++G + QYP+ TY V+ K TLKVKN+ + G DI+K W+L+C+
Sbjct: 473 LADQCKDKPNIWIEPKFSKVLEVKAAQIVTSDKYKAGYTLRFPRVVKIRNDKNYMQCMTMDELVSMSKIFEGRLTKRNFNEKEKNENEVKEKKKRIIPKKLYAVASNFKAADTSNIKVEREIFGQMEFCVMNGDNDFSKEELEILIHQYGGSTTQYPTKDTYAVIAAKETLKVKNIQQKGDIDIIKTKWILDCI 666
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI0006B10C16 (DNA ligase 4-like isoform X1 n=4 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B10C16) HSP 1 Score: 150 bits (378), Expect = 2.030e-38 Identity = 80/196 (40.82%), Postives = 130/196 (66.33%), Query Frame = 1
Query: 7 LAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYA-QAAGDGAQTKKKRKVVVSKAGV-TVAGAFQKASTAGVQVESSVFCGKELCVMGG-GVHGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
LA GHKEKPD+W+EPSKS ++QVKA +++ S++FK+G TLRFPRV+K+R DK W + + + +L + +G+++ + +G+ + KKR+V + T+A FQ A +GV+ S++F GK++CV+ G H K LE++ ++G + VQ P T+CV+T K+ L+VKN++ ++D+V+ WLL CV
Sbjct: 537 LASGHKEKPDLWVEPSKSYIVQVKATEIIKSDRFKTGCTLRFPRVEKVRYDKPWFQCMTLSELEDLKQQAQGKLAFQHLVGNESGETEPSPKKRRVPQRTDRICTIAPQFQPADVSGVKPVSAIFSGKQMCVVIGLPEHSKQNLEKLIVEYGGSVVQNPDVDTFCVITSKVNLRVKNIISMNRYDVVRAEWLLRCV 732
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: A0A6S7GCV9_PARCT (DNA ligase 4 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GCV9_PARCT) HSP 1 Score: 146 bits (369), Expect = 5.430e-38 Identity = 81/196 (41.33%), Postives = 129/196 (65.82%), Query Frame = 1
Query: 1 LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGVH-GKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
+EL G+KEKPDVWIEPSKS+++Q+KAA++VPS+ +K+G TLRFPR++KIR DK+W + LD N + L + KG++S + + + + A K+KR V + +TVA F A + V+ +S +F GKE ++ G GK ++E+ ++G + VQ P T+CV+ K ++V+N+++ D+V WLLEC+
Sbjct: 159 IELPHGYKEKPDVWIEPSKSKIVQIKAAEIVPSDNYKAGQTLRFPRLEKIRDDKSWYECLDLNELERLRSIAKGKLSYQ-HTSTSYEPAPKKRKRVVTRVEKPLTVAKHFAAADASTVEKKSKIFEGKEFYIVNGPPECGKVQIEKNVMENGGSIVQNPGKETFCVIAHKANVRVQNIIKQATCDVVHAFWLLECL 353
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: D3B9H0_POLPP (DNA ligase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B9H0_POLPP) HSP 1 Score: 148 bits (373), Expect = 9.920e-38 Identity = 90/191 (47.12%), Postives = 124/191 (64.92%), Query Frame = 1
Query: 25 EKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTKKKRKVVVSKAG--VTVAGAFQKASTAGVQVESSVFCGKELCVMGGG-VHGKAELERIAHKHGATRVQYPSDST-YCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
E+PDV+I+P+ S VLQ+KAAQ+V +EK+K GFTLRFPRV KIR DK WS+ LD+ GV+ L +Y+G+ ++++ DG TKK+R K + V F+ T GV +S +F G E CV+ G H KA LE + ++G T+VQYPS T Y V + K LK++NL+ SG FDIV WLL+C+
Sbjct: 656 ERPDVYIDPTASFVLQIKAAQIVITEKYKVGFTLRFPRVVKIRDDKQWSECLDEAGVISLANEYEGRYAKRKIE--IQDGKSTKKRRTSTTKKPKKKIGVLQCFEDTDTTGVVKQSGLFEGLEFCVVKGDRQHSKAMLEIVIVENGGTKVQYPSKKTNYVVSSMKEVLKIQNLISSGSFDIVHFQWLLDCI 844
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Match: UPI000719A52C (DNA ligase 4-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719A52C) HSP 1 Score: 147 bits (372), Expect = 1.300e-37 Identity = 76/190 (40.00%), Postives = 124/190 (65.26%), Query Frame = 1
Query: 25 EKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIRLDKAWSDSLDQNGVLELVAKYKGQVSRKRYAQAAGDGAQTK--KKRKVVVSKAGVTVAGAFQKASTAGVQVESSVFCGKELCVMGGGV-HGKAELERIAHKHGATRVQYPSDSTYCVVTDKITLKVKNLMESGKFDIVKPLWLLECV 585
EKPD+W+EPS+ ++Q+KA ++ S+K+ +G TLRFPRV+ +R DKAW D + + EL +G+++ + A D A+ KKR++ ++ ++V FQ A G++ S + G+E+CV+ G H K LE++A +HGAT VQ+P + T+CVVTDK+ L+V+N++E +D+V+ WL+ CV
Sbjct: 546 EKPDLWLEPSQGYIVQIKATEITKSDKYGTGCTLRFPRVEHVRYDKAWYDCMTTTELEELRKNAEGKLASRHVALREDDDAEMPAVKKRRIYKAEQTISVPAQFQPADVTGLKKLSELLQGREICVVNGPPSHSKQTLEKMAVEHGATIVQHPGERTWCVVTDKVNLRVRNMIEHDDYDVVRASWLIRCV 735 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111631.2420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111631.2420.1 >prot_M-pyrifera_M_contig111631.2420.1 ID=prot_M-pyrifera_M_contig111631.2420.1|Name=mRNA_M-pyrifera_M_contig111631.2420.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp LELAPGHKEKPDVWIEPSKSRVLQVKAAQMVPSEKFKSGFTLRFPRVQKIback to top mRNA from alignment at M-pyrifera_M_contig111631:5..589+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111631.2420.1 ID=mRNA_M-pyrifera_M_contig111631.2420.1|Name=mRNA_M-pyrifera_M_contig111631.2420.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig111631:5..589+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111631:5..589+ >mRNA_M-pyrifera_M_contig111631.2420.1 ID=mRNA_M-pyrifera_M_contig111631.2420.1|Name=mRNA_M-pyrifera_M_contig111631.2420.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig111631:5..589+ (Macrocystis pyrifera P11B4 male)back to top |