mRNA_M-pyrifera_M_contig111534.2401.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A0K9RHD3_SPIOL (GOLD domain-containing protein n=3 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RHD3_SPIOL) HSP 1 Score: 70.9 bits (172), Expect = 9.800e-13 Identity = 42/113 (37.17%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAP-TGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCFS----NGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+C+ EE+ N++ + V+ T +TV+VT P G + +S G+F+FT E G Y CFS N G + LD+R G+ A+D+ SVAR EH+ +E+ELRK
Sbjct: 36 KCVSEEIQTNVVVLSDYYVISDDHTSHEPTITVKVTSPYGNDLHSKENVTHGQFAFTTHEAGNYLACFSVVEHNAKGAEVSVNLDWRTGVAAKDWESVARKEHIEGVELELRK 148
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A1Y1IT80_KLENI (Emp24/gp25L/p24 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IT80_KLENI) HSP 1 Score: 70.5 bits (171), Expect = 1.210e-12 Identity = 39/111 (35.14%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCF---SNGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+CLGEE+G L G + VV A A +++V+VT P G+ +S + +G+F FT EE G CF + +G +EL++++G++A+D+ VA+ + + IE++LR+
Sbjct: 30 KCLGEEIGKGTLVVGEYKVVEASAPAVEKISVKVTSPFGKLLHSGDIVPSGQFGFTTEEAGNVMACFWIPGSTAGQFVTVELNWKIGVNAKDWEGVAKKDKITDIELDLRR 140
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A498HXH1_MALDO (GOLD domain-containing protein n=2 Tax=Malus TaxID=3749 RepID=A0A498HXH1_MALDO) HSP 1 Score: 69.3 bits (168), Expect = 3.830e-12 Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCFS----NGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+C+ EE+ N++ G + V+ ++ ++V VT P G + A G+F+FT +E G Y CFS G L LD+++GI A+D+ SVAR E + +E+ELRK
Sbjct: 38 KCVSEEIQNNVVVLGDYGVISHDHNHSSTISVNVTSPYGNNLHHRENATDGQFAFTTQESGTYLACFSVDGNKHEGSSVSLNLDWKIGIAAQDWDSVARKEKIEGVELELRK 149
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: F0W1Z9_9STRA (Uncharacterized protein AlNc14C8G1078 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W1Z9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.950e-12 Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPN-----GEEEYSSNTAAAGEFSFTGEEEGLYRVCFSNGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+C+ +++ L ++VVG G T + V +T P ++ + G SF E EG Y+VCF N + R+ LD R G++ARDY VAR EHL+P+E ELRK
Sbjct: 33 KCMTDQISVGSLVAIDYAVVGVLEGK-TNVGVHITDPTYRDLRRDDNIDHSVENTGSLSFHAEVEGDYQVCFHNLNDYAARIMLDLRYGVEARDYTEVARREHLMPVEKELRK 144
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: W9SBI4_9ROSA (Transmembrane emp24 domain-containing protein 10 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9SBI4_9ROSA) HSP 1 Score: 67.8 bits (164), Expect = 1.400e-11 Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCF----SNGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+C+ EE+ N++ G + VV + ++V+VT P G + A G+F+FT E G Y CF SN G + LD++ GI A+D+ SVAR E + IE+ELRK
Sbjct: 35 KCVSEEIQNNVVVLGDYVVVADDHSLSPTISVKVTSPYGNNLHHGENATHGQFAFTTHEAGNYLACFWVDGSNSGGGDVSVNLDWKTGIAAKDWESVARKEKIEGIELELRK 146
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A7R9VBS9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VBS9_9CHLO) HSP 1 Score: 67.4 bits (163), Expect = 1.610e-11 Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCF----SNGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+C+ EE+ A + G +S V T L +RV P G + T A G F+FT EG YR CF +N R+ LD++VG+ A D+ S+A+ EHL + +ELR+
Sbjct: 31 KCIYEEIKAGNIVVGDYSAVHHDTEVEQYLHIRVDDPYGNPVHEKATTATGTFAFTAAHEGEYRACFMMQAANNEPPNVRVRLDWKVGVAATDWASIAKKEHLDSLTVELRR 142
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A1U8N665_GOSHI (transmembrane emp24 domain-containing protein p24delta4-like n=22 Tax=Gossypium TaxID=3633 RepID=A0A1U8N665_GOSHI) HSP 1 Score: 67.4 bits (163), Expect = 2.210e-11 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCF-----SNGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+C+ EE+ +N++ + VV G +TV+VT P G + G F+FT EE G Y CF + GSG + +D++ GI A+D+ SVAR E L +E+ELRK
Sbjct: 43 KCVSEEIHSNVVVLSDYVVVSVEDGQTATITVKVTSPYGNNLHHRENVTYGRFAFTTEEAGNYLACFWSDNRTRGSG-EVVVNIDWKTGIAAKDWESVARKEKLQGVELELRK 154
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A024G509_9STRA (GOLD domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G509_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.670e-11 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPN-----GEEEYSSNTAAAGEFSFTGEEEGLYRVCFSNGSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+CL +++ L ++VVG G T + V +T P ++ + G F E EG Y+VCF N + R+ LD R G++ARDY VA+ EHL+P+E ELRK
Sbjct: 33 KCLTDQISKGSLVAIDYAVVGVTKGQ-TNVGVHITDPTYKDLRRDDNIDHSVENTGSLVFHAEVEGDYQVCFHNLNDYTARIMLDLRYGVEARDYSEVAKREHLMPVEKELRK 144
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A498J995_MALDO (GOLD domain-containing protein n=2 Tax=Malus TaxID=3749 RepID=A0A498J995_MALDO) HSP 1 Score: 67.0 bits (162), Expect = 2.830e-11 Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCFSNGSGMRR----RLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+C+ EE+ N++ G + V+ + ++V++T P G + G+F+FT +E G Y+ CFS R + LD+++GI A+D+ SVAR E + +E+ELRK
Sbjct: 37 KCVSEEIQNNVVVLGDYVVISDDRSHSPTISVKITSPYGNNLHHGENETNGQFAFTTQESGTYQACFSVDGDKREGSSVSVSLDWKIGIAAQDWDSVARKEKIEGVELELRK 148
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Match: A0A7I8VU22_9ANNE (DgyrCDS8412 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VU22_9ANNE) HSP 1 Score: 66.6 bits (161), Expect = 3.570e-11 Identity = 42/113 (37.17%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 1 QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAGEFSFTGEEEGLYRVCFSN-----GSGMRRRLELDFRVGIDARDYGSVARAEHLLPIEMELRK 324
+CL EE+ N+ G + + AP G T L VT G YS A G+F+FT ++ L+ VCF G G R + L + G++A++YG +ARAE L P+E+EL++
Sbjct: 31 KCLREEIHKNVTVIGEYELSHAP-GQKTNL--HVTDSKGHTLYSKEEAEKGKFAFTTDDYDLFEVCFETKMIGGGHGQDREVYLSMKHGVEAKNYGDIARAEKLKPLEVELKR 140 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111534.2401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111534.2401.1 >prot_M-pyrifera_M_contig111534.2401.1 ID=prot_M-pyrifera_M_contig111534.2401.1|Name=mRNA_M-pyrifera_M_contig111534.2401.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp QCLGEEVGANLLARGAWSVVGAPTGAATQLTVRVTRPNGEEEYSSNTAAAback to top mRNA from alignment at M-pyrifera_M_contig111534:1..324- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111534.2401.1 ID=mRNA_M-pyrifera_M_contig111534.2401.1|Name=mRNA_M-pyrifera_M_contig111534.2401.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=324bp|location=Sequence derived from alignment at M-pyrifera_M_contig111534:1..324- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111534:1..324- >mRNA_M-pyrifera_M_contig111534.2401.1 ID=mRNA_M-pyrifera_M_contig111534.2401.1|Name=mRNA_M-pyrifera_M_contig111534.2401.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig111534:1..324- (Macrocystis pyrifera P11B4 male)back to top |