mRNA_M-pyrifera_M_contig101134.240.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: A0A482UN00_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UN00_9ARCH) HSP 1 Score: 112 bits (281), Expect = 8.580e-26 Identity = 75/223 (33.63%), Postives = 108/223 (48.43%), Query Frame = 1 Query: 7 VTAAGVPPVLRV-SRDAIEFEYRVVQEDPGRRVPFAEAVTITNVSE-REVQWAVDERTLAAASAIAGSPVPVFGVSLSKGSLLPRESVELAVTFAPQRHGDFFASLPLYI------------------------DGNEERAPAPRMVGGXXXXXDVGDEVLVDAGGEHGPYVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRV 597 +TA G P L + S I+FEYRVV D RRVP+ T+ N E E++W D L + G VF + G + P SV L + F P +F ++P+Y+ DG +R PA + + + L PY+ E++GTGI PQLSF+VR++ LP+VPLG A A F+++ HG+DHLEL+ R+ Sbjct: 1 MTAHGQKPRLVIDSGSIIDFEYRVVLSDAARRVPYGITATLRNADESNELRWQADTSNL---RPLYGGLKQVFSMEPDGGVIPPAGSVTLKIRFLPFATREFTNTIPIYVMDDDNKEEFVRACEEANATSATRGDGGADRRPALTL---NTVSGPISSDTLA-------PYLELELKGTGIQPQLSFNVRDVLLPAVPLGVEARAIFYVMSHGFDHLELRHRL 210
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: A0A7S1CK84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CK84_9STRA) HSP 1 Score: 104 bits (260), Expect = 3.750e-23 Identity = 55/146 (37.67%), Postives = 81/146 (55.48%), Query Frame = 1 Query: 214 VFGVSLSKGSLLPRESVELAVTFAPQRHGDFFASLPLYIDGNEERAPAPRMVGGXXXXXDVGDEVLVDAGGEHGPYVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQG 651 V+ + S+GSL P E + V+F P ++ A +PLY+DGN+ER PYV ++ G G+ QL+FD RE+ LP LGE A A F++I GYDHLEL++++P++ PA+VPL++ FP G Sbjct: 117 VYRLDPSQGSLRPGERTTVRVSFLPGDSREYNAIVPLYLDGNKER-----------------------------PYVELQLSGVGLYAQLTFDRREVVLPVTALGEVATATFNVINCGYDHLELRYKMPAESSPARVPLQVSFPDG 233
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: A0A813B4V2_9DINO (CFAP47 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B4V2_9DINO) HSP 1 Score: 105 bits (261), Expect = 9.230e-23 Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 211 PVFGVSLSKGSLLPRESVELAVTFAPQRHGDFFASLPLYIDGNEERAPAPRMVGGXXXXXDVGDEVLVDAGGEHGPYVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQGTT 657 P+F +S + G L P + ++ VTF P ++ +P+Y+DG EE PY+ ++G GI PQL+F+ RE+ LPSVPL + +A F+++ GYDHLEL++R+P++ A +PL++ FP+GTT Sbjct: 225 PIFSLSPNSGRLEPGQLQKVEVTFQPVSLTNYHYVVPMYLDGQEEA-----------------------------PYMEINLKGKGIEPQLTFEQREVVLPSVPLNFSTSAVFYVLNQGYDHLELRYRLPAEGSDASIPLQVIFPEGTT 344
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: V9FWK4_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FWK4_PHYPR) HSP 1 Score: 99.4 bits (246), Expect = 2.370e-20 Identity = 75/230 (32.61%), Postives = 106/230 (46.09%), Query Frame = 1 Query: 1 RSVTAAGVPPVLRVSRDAIEFEYRVVQEDPGRRVPFAEAVTITNVSEREVQWAVDERTLAAASAI--AGSPVPVFGVSLSKGSLLPRE-------SVELAVTF--APQRHGDFFASLPLYIDGNEERAPAPRMVGGXXXXXDVGDEVLVDAGGEHGPYVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQGTT 657 R V A + P LR S I F ++ + R+VP+ + + +TN E+ ++W +D L + I A V S G+ L + S ++V F AP R G+ + I + A DE+ + E YV F +RG GI P LSF + LP+VPLG TA A FH+ GYDHLEL RVP D ++ PL + FP+G T Sbjct: 1253 RRVLARAIVPRLRFSTSTIHFNRCIITREGIRKVPYTKQLVLTNDDEQTIRWQIDTTRLRQGNLIQFAAGAAAVVASGASSGAALAKRIASVNPSSSAMSVVFHVAPDR-GELAPGEQVTIRVSFLPLDAVEYAD---------DELPLFVDDEF--YVNFSLRGEGIYPHLSFSTNRVVLPTVPLGMTANAQFHVYATGYDHLELNCRVPLDT--SRAPLTVLFPRGKT 1468
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: H3H3R6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3R6_PHYRM) HSP 1 Score: 98.6 bits (244), Expect = 4.380e-20 Identity = 78/241 (32.37%), Postives = 110/241 (45.64%), Query Frame = 1 Query: 1 RSVTAAGVPPVLRVSRDAIEFEYRVVQEDPGRRVPFAEAVTITNVSEREVQWAVDERTL----------AAASAIAGSPVPVFGVSLSK--GSLLPRESVELAVTFAPQRHGDF---------FASLPL-YIDGNEERAPAPRMVGGXXXXXDVGDEVLVDAGGEHGPYVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQGTT 657 R V A + P LR S + F V+ + R+VP+ + + +TN + ++W VD L AA+A + G +L+K S P S V G+ + LPL ++ E+ P +LVD GE PYV +RG GI P LSF + LP+VPLG TA+A+FH+ GYDHLEL RVP D ++ PL + FP+G T Sbjct: 1257 RRVLARAIVPRLRFSSSTMHFNRCVITCEGIRKVPYTKQLVLTNDDAQPLRWQVDTARLRQGNLVTFAAGAAAATVSAGAVSSGTTLAKRIASANPTNSATAVVFHVAPDRGELAPGEEVAIRVSFLPLDAVEYTEDELP-----------------LLVD--GE--PYVNLSLRGEGIHPHLSFSTNRVVLPTVPLGVTASASFHVHATGYDHLELACRVPLDT--SRAPLTVSFPRGKT 1474
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: A0A1Y1I836_KLENI (Calponin-homology (CH) domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I836_KLENI) HSP 1 Score: 86.7 bits (213), Expect = 5.700e-16 Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 1 Query: 214 VFGVSLSKGSLLPRESVELAVTFAPQRHGDFFASLPLYIDGNEERAPAPRMVGGXXXXXDVGDEVLVDAGGEHGPYVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQGT 654 VF V +G L S + VTF P+ + S+P+++DG E+ P Y ++GTG+AP L+F+VRE+ LP VPL A F+++ GYD+L++K+R+P D K PL++ FP GT Sbjct: 1217 VFTVEPKQGVLAEGTSTTIRVTFLPREAEQYKCSVPVHLDGTTEKEP----------------------------YSFLTLKGTGLAPGLAFEVREITLPVVPLDIRTRARFYLVNKGYDNLDVKYRLPIDS--DKAPLQLEFPGGT 1333
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: A0A5A8CSJ7_CAFRO (Calponin-homology (CH) domain-containing protein n=9 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSJ7_CAFRO) HSP 1 Score: 86.7 bits (213), Expect = 5.770e-16 Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 1 RSVTAAGVPPVLRVSRDAIEFEYRVVQEDPGRRVPFAEAVTITNVSEREVQWAVDERTLAAASAIAGSPVPVFGVSLSKGSLLPRESVELAVTFAPQRHGDFFASLPLYIDGNEERAPA 357 R VTA + P LR+S +EF +RV+ + RRVP+ +T+TN + EV WA D LA + G P PVF S ++G L P E+ + V F+P DF +PLY+DG+ ERA A Sbjct: 1464 RLVTAEALRPRLRLSTTRVEFGHRVLHAELTRRVPYTMTITLTNTEQEEVSWAADTSLLAGSRE--GGP-PVFSWSPAEGVLAPGETDTVRVQFSPADLRDFGVRVPLYLDGDLERARA 1579
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: A0A7S2HBX7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2HBX7_9DINO) HSP 1 Score: 79.0 bits (193), Expect = 1.010e-13 Identity = 52/178 (29.21%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 118 VTITNVSEREVQWAVDERTLAAASAIAGSPVPVFGVSLSKGSLLPRESVELAVTFAPQRHGDFFASLPLYIDGNEERAPAPRMVGGXXXXXDVGDEVLVDAGGEHGPYVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQG 651 + + N + ++W +D L + VF + + L P + + F P ++ A+L +YI +PA R G D ++ E Y+ ++G G P+L+FD RE+ LP+VPLG + F+II GY+ LE+K+R+P+D ++PL I FP+G Sbjct: 19 LALHNADDYPIEWKIDTEPLK-------KYLGVFTLDPTHAILAPEQDCLVRAAFMPNEPIEYKATLNVYI------SPA-RSAGAEGAE----DPTVILPPDESELYLPLRLKGQGTVPKLTFDRREIVLPTVPLGIRSRCLFYIINEGYESLEVKYRLPTDN--IRIPLTINFPEG 176
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: W2QTD5_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QTD5_PHYPN) HSP 1 Score: 79.3 bits (194), Expect = 1.810e-13 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 439 YVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQGTT 657 YV F +RG GI P LSF + LP+VPLG TA A FH+ GYDHLEL RVP D ++ PL + FP+G T Sbjct: 558 YVNFSLRGEGIYPHLSFSTNRVVLPTVPLGMTANAQFHVYATGYDHLELNCRVPLDT--SRAPLTVLFPRGKT 628
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Match: A0A7S0RFM2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RFM2_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 7.100e-13 Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 439 YVVFEMRGTGIAPQLSFDVRELRLPSVPLGETAAAAFHIIGHGYDHLELKWRVPSDKHPAKVPLRIYFPQG 651 YV E+ G G+ P+++FD RE+ +P VPLG + HII HGYD+LEL++++P+D+ +VPL++ FP+G Sbjct: 64 YVTLELTGKGMFPRMTFDAREVVMPVVPLGVVSYCTVHIINHGYDNLELQYKLPADE--DRVPLKVSFPEG 132 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101134.240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101134.240.1 >prot_M-pyrifera_M_contig101134.240.1 ID=prot_M-pyrifera_M_contig101134.240.1|Name=mRNA_M-pyrifera_M_contig101134.240.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp RSVTAAGVPPVLRVSRDAIEFEYRVVQEDPGRRVPFAEAVTITNVSEREVback to top mRNA from alignment at M-pyrifera_M_contig101134:15..671+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101134.240.1 ID=mRNA_M-pyrifera_M_contig101134.240.1|Name=mRNA_M-pyrifera_M_contig101134.240.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=657bp|location=Sequence derived from alignment at M-pyrifera_M_contig101134:15..671+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101134:15..671+ >mRNA_M-pyrifera_M_contig101134.240.1 ID=mRNA_M-pyrifera_M_contig101134.240.1|Name=mRNA_M-pyrifera_M_contig101134.240.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1314bp|location=Sequence derived from alignment at M-pyrifera_M_contig101134:15..671+ (Macrocystis pyrifera P11B4 male)back to top |