prot_M-pyrifera_M_contig111527.2399.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig111527.2399.1
Unique Nameprot_M-pyrifera_M_contig111527.2399.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length156
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111527.2399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031334Piezo non-specific cation channel, R-Ras-binding domainPFAMPF12166Piezo_RRas_bdgcoord: 2..152
e-value: 2.8E-16
score: 59.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..156
NoneNo IPR availableTMHMMTMhelixcoord: 67..86
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111527contigM-pyrifera_M_contig111527:111..578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111527.2399.1mRNA_M-pyrifera_M_contig111527.2399.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig111527 111..590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig111527.2399.1 ID=prot_M-pyrifera_M_contig111527.2399.1|Name=mRNA_M-pyrifera_M_contig111527.2399.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp
MRNNLFSAQVAAASRERDKEVLSGRKERPWLEKIGSGWTVFGVLLALLLL
PIFVFSTLNPVLEKNPIYGAQVVLAFHGGGTTYTVFDRAQYRAIYTPQNS
SEHGFFSKLQTNATPHGELASPIRPAMRNEIQQVVMLPFPAADWVISPPA
LSGFLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031334Piezo_RRas-bd_dom