mRNA_M-pyrifera_M_contig111524.2397.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A059LNB2_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LNB2_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 9.140e-14 Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = 1
Query: 88 GRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTLTPAH 534
GR+ +L GH+G+V G++ LS S DR+I VW L G C R I PS +AV D L AS H DGT+R +DLR+GK E LH+ A+ + G+ +LT+GRD+++ + +T H
Sbjct: 2 GRLAASLTGHTGRVGGVAASPLEAG---------------VALSASADRTIKVWGLEKGFCARTILCPSTCHAVGFVRDATLIASGHWDGTLRFWDLRSGKGAHEIAGLHAGQATVASSFSGN---TVLTSGRDNLLRVVDTRTFEVMH 132
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A2P6TMB6_CHLSO (Autophagy-related 16 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TMB6_CHLSO) HSP 1 Score: 75.9 bits (185), Expect = 1.300e-12 Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 1
Query: 214 LSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTLTPAHAHSFSHPALHIPFAWS 582
+SC ++R+I VW L G R++ PS+ N++A + DG L AS H DGT+R +DLRTG+ E LHS + G A +LT G+D+++ + + H + S P+ + AW+
Sbjct: 557 VSCGSERAIKVWGLTDGLHRRSMMCPSICNSLAITADGSLVASGHFDGTLRFWDLRTGRVAHEVAGLHSPHGGITSVDTGSSGALVLTCGKDNLLRCVDVRRFEVRH--TLSAPSFSVGGAWT 677
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A1X7VWS1_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VWS1_AMPQE) HSP 1 Score: 69.7 bits (169), Expect = 1.190e-10 Identity = 54/161 (33.54%), Postives = 76/161 (47.20%), Query Frame = 1
Query: 25 SHDVVAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRT-PSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAP-----ASSVAFSVGDGSARLLTAGRD 489
S + G + I +W+ E V GH +V G+S ++ S SC DR +C+WD+RSGKC+R I S +NAV G A+A DGTIRLFD + +++ L++ P ASS+ FS S R+L AG D
Sbjct: 168 SDQQILTAGANTKIALWDMERPDPVCEFVGHKSEVMGVSLMQQNSCS--------------VFASCGNDRCVCIWDIRSGKCIRRIDDYSSELNAVEFYSTGEAVATAATDGTIRLFDFKADQEI----MLYAKPTILLAASSLDFSK---SGRILFAGYD 307
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A7S3E560_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E560_9CHLO) HSP 1 Score: 67.8 bits (164), Expect = 2.140e-10 Identity = 51/154 (33.12%), Postives = 70/154 (45.45%), Query Frame = 1
Query: 37 VAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVI 498
V A G D +R+W E+GR TL GH KV+GLSF S + +S DR CV+ I S V+ S +G S H DG++R++D RTG +LH++ SSV S L+TAG+D+ I
Sbjct: 4 VVASGADGALRMWGVESGRCKHTLTGHRDKVHGLSFASSDSKK---------------CVSGGQDRXXXXXXXXXXYCVQTIACGSTCFGVSMSTNGSFVYSGHFDGSVRIWDFRTGSLEKNLPQLHTSQISSVVTSP-HSDRYLVTAGKDNTI 141
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A6A6MQF4_HEVBR (ATG16 domain-containing protein n=6 Tax=Crotonoideae TaxID=235631 RepID=A0A6A6MQF4_HEVBR) HSP 1 Score: 69.3 bits (168), Expect = 2.150e-10 Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 43 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXT---------------------------LLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 522
+GG DR+I++W+ TG ++RTL G G V LS + S XXXXXXXXXXXXX ++S + DR+I VWDL+ G C I S NA+ S DG+ S H DG +RL+D+ TGK ++E HS +S+ S +LT+GRD++ + ++L
Sbjct: 262 SGGQDRSIKMWDTNTGSLIRTLYGCLGSVLDLSLTHDNRSXXXXXXXXXXXXXXXXXXXXXXXXXXHIDKVCAVDVSKISSRHVVSAAYDRTIKVWDLQKGYCTSTIVFHSNCNALCFSTDGMTICSGHVDGNLRLWDIHTGKLLSEV-AAHSLAITSICLSKNGNV--VLTSGRDNLHNLFDMRSL 445
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A6A6K653_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6K653_HEVBR) HSP 1 Score: 69.3 bits (168), Expect = 2.340e-10 Identity = 68/187 (36.36%), Postives = 97/187 (51.87%), Query Frame = 1
Query: 43 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXT---------------------------LLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 522
+GG DR+I++W+ TG ++RTL G G V LS + S XXXXXXXXXXXXX ++S + DR+I VWDL+ G C I S NA+ S DG+ S H DG +RL+D+ TGK ++E HS +S+ S +LT+GRD++ + ++L
Sbjct: 492 SGGQDRSIKMWDTNTGSLIRTLYGCLGSVLDLSLTHDNRSXXXXXXXXXXXXXXXXXXXXXXXXXXHIDKVCAVDVSKISSRHVVSAAYDRTIKVWDLQKGYCTSTIVFHSNCNALCFSTDGMTICSGHVDGNLRLWDIHTGKLLSEV-AAHSLAITSICLSKNGNV--VLTSGRDNLHNLFDMRSL 675
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A834GG99_RHOSS (ATG16 domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GG99_RHOSS) HSP 1 Score: 66.2 bits (160), Expect = 2.440e-9 Identity = 52/193 (26.94%), Postives = 87/193 (45.08%), Query Frame = 1
Query: 25 SHDVVAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTS---------------------------SSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 522
S +A+GG D+ I++W+ +TG + RTL G G + L+ + + ++S + DR+I VWDL GKC+ S +A+ S DG S H DG++RL++++TGK ++E HS +SV+ S +LT+GRD + + ++L
Sbjct: 241 SSGALASGGQDQTIKIWDTDTGSLRRTLCGCLGSILDLAITNDNXXXXXXXXXXXXXXXXXXXXXXXXXXKGHKDKVCAVDTSKVSRFHVVSAAYDRTIKVWDLHKGKCINTTIFHSNCSAICFSIDGQTICSGHVDGSLRLWNMQTGKLLSEV-AAHSLAVTSVSLSRSGNV--ILTSGRDGLHNLFDIRSL 430
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: A0A6P6X992_COFAR (autophagy-related protein 16-like n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6X992_COFAR) HSP 1 Score: 66.2 bits (160), Expect = 2.530e-9 Identity = 56/187 (29.95%), Postives = 83/187 (44.39%), Query Frame = 1
Query: 43 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFP-------SFSTSSSXXXXXXXXXXXXXTL--------------------LSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTL 522
+GG DR++++W+ TG +VRT G G V LS + S S + TL +S + DR+I VWDL+ G C+ I PS NA+ S DG S H DG TGK ++E HS +S++ S + +LT+GRD++ + +TL
Sbjct: 320 SGGQDRDVKMWDTNTGALVRTFEGCVGSVLDLSITPDNRTIIAASGSKNLVVWDASSARTRHTLTGHMEKVVAVDVSKISSRHVVSAAYDRTIKVWDLQKGYCINTILFPSNCNALTFSIDGQTICSGHVDGNXXXXXXXTGKLLSEV-AAHSLAVTSLSLSRNGNT--ILTSGRDNLHNLFDMRTL 503
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: L8GZR3_ACACA (Autophagy related 16 like 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZR3_ACACA) HSP 1 Score: 65.9 bits (159), Expect = 3.390e-9 Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 1
Query: 76 NRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAASGDGV-LAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFS 447
N ++ TL GH GKV G +F S +++ S DR++ VWDL G CVR + S NAVA G+ + SAH D +RL+DL+T VAE + S A+S+++S
Sbjct: 350 NLSNAKIKHTLTGHVGKVMGATFVSAEK-----------------IITGSQDRTVKVWDLGKGYCVRTVFCYSPCNAVAVVGESTRMLCSAHADRRVRLWDLKTADPVAEIQDVQSKQATSISWS 457
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Match: G0M842_CAEBE (CBN-ATG-16.1 protein n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0M842_CAEBE) HSP 1 Score: 63.2 bits (152), Expect = 2.800e-8 Identity = 49/169 (28.99%), Postives = 76/169 (44.97%), Query Frame = 1
Query: 43 AGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTSSSXXXXXXXXXXXXXTLLSCSTDRSICVWDLRSGKCVRAIRTPSVVNAVAAS--GDGVLAASAHQDGTIRLFDLRTGKKVAEAHKLHSAPASSVAFSVGDGSARLLTAGRDSVIHQLSAKTLTPAHAHS 543
A D+N+R+WN +T R++ TL+GHS +V + F ++ +S S DR I VWDL++ +C R++ S VN +A + G L AS H D +R +D R+ V K + V LL + RD I + + H +S
Sbjct: 300 ASSNDKNVRLWNLDTSRLMSTLSGHSDQVTCVKFYQSHSA-----------------VSGSADRVIKVWDLQNQRCSRSLFPASKVNDIATNMGGSPSLFASGHFDKKLRFYDARSSDPV----KTVDMNGRITSLDVTMSGCELLISTRDDTITMMDLRNFQTVHCYS 447 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111524.2397.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111524.2397.1 >prot_M-pyrifera_M_contig111524.2397.1 ID=prot_M-pyrifera_M_contig111524.2397.1|Name=mRNA_M-pyrifera_M_contig111524.2397.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp MSVALSHDVVAAGGTDRNIRVWNRETGRVVRTLAGHSGKVYGLSFPSFSTback to top mRNA from alignment at M-pyrifera_M_contig111524:5..586- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111524.2397.1 ID=mRNA_M-pyrifera_M_contig111524.2397.1|Name=mRNA_M-pyrifera_M_contig111524.2397.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig111524:5..586- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111524:5..586- >mRNA_M-pyrifera_M_contig111524.2397.1 ID=mRNA_M-pyrifera_M_contig111524.2397.1|Name=mRNA_M-pyrifera_M_contig111524.2397.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig111524:5..586- (Macrocystis pyrifera P11B4 male)back to top |