mRNA_M-pyrifera_M_contig111503.2389.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A517PLR6_9PLAN (DNA helicase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PLR6_9PLAN) HSP 1 Score: 368 bits (944), Expect = 4.070e-117 Identity = 192/196 (97.96%), Postives = 195/196 (99.49%), Query Frame = 1
Query: 1 SLTRAMQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
SLTRA+QV+PPEELRPEQ RQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGG+APFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY
Sbjct: 631 SLTRAIQVKPPEELRPEQHRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGSAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 826
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A518A4H4_9PLAN (DNA helicase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A4H4_9PLAN) HSP 1 Score: 345 bits (886), Expect = 1.030e-108 Identity = 180/196 (91.84%), Postives = 188/196 (95.92%), Query Frame = 1
Query: 1 SLTRAMQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
+LTRAM +EPP +LRPEQ+RQV YAQSVLQELRAKKDRLSLVELLNLALERTGYDAAL+NEFLGDRKLANLRKLIELARNFE TGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPG APFLHP+WG LLNLPAERG TPDN+AFKMHRGLEQ+ADEEETVRLLY
Sbjct: 631 TLTRAMLLEPPGDLRPEQRRQVLYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALLNEFLGDRKLANLRKLIELARNFEATGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGATAPFLHPDWGALLNLPAERGITPDNYAFKMHRGLEQKADEEETVRLLY 826
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A517V9V2_9PLAN (DNA helicase n=14 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V9V2_9PLAN) HSP 1 Score: 319 bits (818), Expect = 6.000e-99 Identity = 165/195 (84.62%), Postives = 178/195 (91.28%), Query Frame = 1
Query: 4 LTRAMQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
LT AM + PP E+RPEQ+RQV YAQ+VLQELRAKKDRLSLVELLNLALERTGYDAAL+NEFLGDRKLANLRKLIELARNFE TGLFTLKDFVQRIRDSILEESKEELAATLPETSDV+RLMTIHQSKGLEFPVVI+ADMDR+ PFLHP+WG LLNLPAERG TP+NFAFKMHR +EQ ADE+ET+RLLY
Sbjct: 632 LTTAMLIPPPTEVRPEQKRQVLYAQAVLQELRAKKDRLSLVELLNLALERTGYDAALLNEFLGDRKLANLRKLIELARNFEATGLFTLKDFVQRIRDSILEESKEELAATLPETSDVIRLMTIHQSKGLEFPVVIVADMDRRSQGASKDPFLHPQWGALLNLPAERGVTPENFAFKMHRAIEQNADEDETIRLLY 826
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A517WWF4_9PLAN (DNA helicase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WWF4_9PLAN) HSP 1 Score: 311 bits (796), Expect = 9.100e-96 Identity = 160/196 (81.63%), Postives = 178/196 (90.82%), Query Frame = 1
Query: 1 SLTRAMQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
+L A++ PP+EL+PEQ+RQV YAQSVL ELR+KKDRLSL ELLNLALERTGYDAAL+NEFLG+RK+ANLRKLIELARNFE TGLFTLKDFVQRIRDSILEESKEELAATLPETSDV+RLMTIHQSKGLEFP+VI+AD+DRK G APFLHPEWG LL+LPAERG P+N+AFKMH LEQRA+EEETVRLLY
Sbjct: 631 TLAEAIRTLPPDELQPEQKRQVLYAQSVLAELRSKKDRLSLAELLNLALERTGYDAALLNEFLGERKIANLRKLIELARNFESTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVIRLMTIHQSKGLEFPIVIVADLDRKSHGGSKAPFLHPEWGALLSLPAERGVVPENYAFKMHHALEQRANEEETVRLLY 826
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A518IAI6_9PLAN (DNA helicase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IAI6_9PLAN) HSP 1 Score: 295 bits (754), Expect = 7.990e-90 Identity = 156/197 (79.19%), Postives = 175/197 (88.83%), Query Frame = 1
Query: 1 SLTRAMQVEPPEE-LRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
+L++AM+ P ++ L+P Q+RQV YAQ VL ELR+KKDRLSLVELLNLALERTGYDAAL+NEFLGDRK+ANLRKLIE+ARNFE +GLFTLKDFVQRIRDSILEESKEELAATLPETSDV+RLMTIHQSKGLEFPVVI+AD+DRK PFLHPEWG LL LPA +GT P+N+AF MHR LEQRADEEETVRLLY
Sbjct: 631 TLSKAMREMPADDDLQPRQKRQVLYAQRVLAELRSKKDRLSLVELLNLALERTGYDAALLNEFLGDRKIANLRKLIEMARNFESSGLFTLKDFVQRIRDSILEESKEELAATLPETSDVIRLMTIHQSKGLEFPVVIVADLDRKSQGASKDPFLHPEWGALLPLPAVKGTVPENYAFHMHRVLEQRADEEETVRLLY 827
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A3B1DTU6_9ZZZZ (DNA helicase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DTU6_9ZZZZ) HSP 1 Score: 219 bits (559), Expect = 3.380e-63 Identity = 115/196 (58.67%), Postives = 151/196 (77.04%), Query Frame = 1
Query: 1 SLTRAMQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
+L+ A+Q +P ++L QQ+Q++ A++VL ELR KKD L L +LL LALERTGYDA+L++E+LGDRKLANL KLIE+AR F+ +G++TLKDFV ++R+SI E KEE+A TLPET DVVRLM+IH+SKGLEFPVV +ADMDRKP HP+WG LL+LP ++G+ DN M+ E+R +EEET RLLY
Sbjct: 409 TLSAALQQKPSKDLPEIQQQQIKRAETVLNELRVKKDMLPLAQLLKLALERTGYDASLLHEYLGDRKLANLHKLIEMARTFDSSGMYTLKDFVIQMRESIAREEKEEMAVTLPETGDVVRLMSIHKSKGLEFPVVFVADMDRKPPQSSAGAVYHPQWGPLLSLPKKQGSKGDNPGRIMYSVAEKREEEEETYRLLY 604
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: UPI000299DC69 (UvrD-helicase domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI000299DC69) HSP 1 Score: 211 bits (537), Expect = 9.290e-60 Identity = 112/196 (57.14%), Postives = 142/196 (72.45%), Query Frame = 1
Query: 1 SLTRAMQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
SL + +EPP L Q+ ++ +A +L ELRA KDR+ L +LLN A+ERTGYDA+L+ EFLG RKLANLRKLIE+AR F+ FTLKDFV R++ S+L+E+ EE A TLPE+ DVVRLM+IHQSKGLEFPVVI+AD+DRK P + LHP+ G L+ LP + G P N A +MH E+ AD EET+RL Y
Sbjct: 678 SLHTNLYLEPPTHLPESQRERIAFAARILSELRASKDRIPLTDLLNRAIERTGYDASLLAEFLGRRKLANLRKLIEMARQFDKGEFFTLKDFVTRLQTSVLDETDEEFATTLPESGDVVRLMSIHQSKGLEFPVVIVADIDRKGPPRSSDSVLHPDLGPLVTLPQQFGNEPKNLALRMHLLAEEEADSEETIRLFY 873
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A2D6SUJ8_9PLAN (DNA helicase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SUJ8_9PLAN) HSP 1 Score: 198 bits (503), Expect = 2.090e-57 Identity = 110/188 (58.51%), Postives = 136/188 (72.34%), Query Frame = 1
Query: 25 EPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
EPP+ L EQQRQ+R+A VL ELR+ KDR+ + +LL ALERTG+DA+L+NEFLG RKLANLRKL+++AR + GLFTLKDFV R+R+S+ E++ EELAAT PE+S+VVRLMT+HQSKGLEFPVVILAD DR H + G LL LP RG P N MH+ E ++ ET RLLY
Sbjct: 2 EPPDHLDLEQQRQIRHAGEVLSELRSLKDRIPMAKLLERALERTGFDASLLNEFLGSRKLANLRKLVDMARQMDSVGLFTLKDFVIRLRESVAEQTNEELAATHPESSNVVRLMTVHQSKGLEFPVVILADCDRSQRGVQATVEYHSQLGPLLPLPPVRGARPTNLGQVMHQLDEAPEEKAETDRLLY 189
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A7C2JY20_9PLAN (DNA helicase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2JY20_9PLAN) HSP 1 Score: 197 bits (502), Expect = 4.730e-55 Identity = 102/187 (54.55%), Postives = 140/187 (74.87%), Query Frame = 1
Query: 28 PPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
PP L Q+RQ+R+A L LR++KDRL + ELL ++ERTGYDA+L+ EFLG RK+ANLRKLI+ A F+ FTLKD+V+R++ S+LEE++EE A T PE+ +V+RLM++HQSKGLEFPVV +AD++R+ AP+LHPEWG L+++P E G DN A +M + EQ+ADEEE++RL Y
Sbjct: 651 PPAFLSEAQRRQIRFAAETLAWLRSRKDRLPIAELLTASVERTGYDASLLVEFLGSRKVANLRKLIDQAALFDRGEAFTLKDYVERLKTSVLEETEEEFATTQPESGNVIRLMSVHQSKGLEFPVVFVADINRRSNNRSPAPYLHPEWGALVDIPNEFGKERDNLALRMLKLQEQQADEEESLRLFY 837
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Match: A0A518CR09_9PLAN (DNA helicase n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CR09_9PLAN) HSP 1 Score: 196 bits (497), Expect = 2.260e-54 Identity = 106/196 (54.08%), Postives = 145/196 (73.98%), Query Frame = 1
Query: 1 SLTRAMQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDAALMNEFLGDRKLANLRKLIELARNFEGTGLFTLKDFVQRIRDSILEESKEELAATLPETSDVVRLMTIHQSKGLEFPVVILADMDRKPAPGGNAPFLHPEWGGLLNLPAERGTTPDNFAFKMHRGLEQRADEEETVRLLY 588
SL +A+ EPP L PEQQ+Q+R A VL ELR++KD+ +LV+L LE TGYDA+L++EF+G RK+ANLRKLI++AR F+ +GL+TL DFV R++ S+ EESKEELA T PETSDVVRLMT+HQSKGLEFPVVI++D +P+P +A HP G L++ P ++G + + +++ E+ AD+EE RL Y
Sbjct: 633 SLLQAITTEPPAHLPPEQQQQIRQAARVLTELRSQKDQWTLVKLFRYLLEETGYDASLLHEFMGARKVANLRKLIDMARQFDRSGLYTLSDFVVRLKTSLREESKEELATTHPETSDVVRLMTVHQSKGLEFPVVIVSDCAWEPSPQHSAVAFHPHLGPLVSPPTKQGESKKSLGQQINHQEEKWADKEEYKRLFY 828 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111503.2389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111503.2389.1 >prot_M-pyrifera_M_contig111503.2389.1 ID=prot_M-pyrifera_M_contig111503.2389.1|Name=mRNA_M-pyrifera_M_contig111503.2389.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp MQVEPPEELRPEQQRQVRYAQSVLQELRAKKDRLSLVELLNLALERTGYDback to top mRNA from alignment at M-pyrifera_M_contig111503:3..590- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111503.2389.1 ID=mRNA_M-pyrifera_M_contig111503.2389.1|Name=mRNA_M-pyrifera_M_contig111503.2389.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig111503:3..590- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111503:3..590- >mRNA_M-pyrifera_M_contig111503.2389.1 ID=mRNA_M-pyrifera_M_contig111503.2389.1|Name=mRNA_M-pyrifera_M_contig111503.2389.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig111503:3..590- (Macrocystis pyrifera P11B4 male)back to top |