mRNA_M-pyrifera_M_contig111453.2377.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A3D5DA77_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DA77_9GAMM) HSP 1 Score: 324 bits (831), Expect = 1.010e-106 Identity = 152/195 (77.95%), Postives = 171/195 (87.69%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
VMA WINDGIQPMDIWDVD+RR+QP HNNKS++VDR ESLGIAYQMHWPNRQW++ARNVKQS LHDRLAA GA FGESAGWERPNW A Q+A Y YDFGRQNWF+NNR EH+AVREAVGVF+QSSF+KLL+QGRD VLN+IATA + V +GKV+YTQFLN GGVEADLT+TRLA+D YL+VTAAFT TH
Sbjct: 59 VMAQWINDGIQPMDIWDVDIRRVQPFHNNKSFVVDRIYESLGIAYQMHWPNRQWDSARNVKQSILHDRLAAAGACFGESAGWERPNWYALAGQKAEYEYDFGRQNWFDNNREEHVAVREAVGVFEQSSFTKLLIQGRDTCSVLNQIATAEMDVMIGKVVYTQFLNRCGGVEADLTVTRLAQDCYLLVTAAFTQTH 253
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A836TKH9_9PROT (FAD-dependent oxidoreductase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TKH9_9PROT) HSP 1 Score: 312 bits (800), Expect = 9.480e-99 Identity = 146/193 (75.65%), Postives = 166/193 (86.01%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTH 582
+MAHWI +G P D+WDVD+RRI+ HNNKSYIVDR ESLGIAYQMHWPNRQW+TARNVK+S LHDR+AA GA FGESAGWERPNW A+ Q+A Y YDFGRQNWF NN EH AVRE VG+F+QSSFSKLLVQGR AERVLNR+ATA+++ PVG V YTQFLN RGG+EADLTI+RLAED+YL+VT AFTH
Sbjct: 369 MMAHWIAEGHAPKDVWDVDIRRIRHFHNNKSYIVDRIPESLGIAYQMHWPNRQWQTARNVKKSVLHDRVAAAGACFGESAGWERPNWYADPGQKAEYAYDFGRQNWFNNNAAEHNAVREKVGLFEQSSFSKLLVQGRGAERVLNRLATADMSAPVGNVSYTQFLNERGGIEADLTISRLAEDQYLVVTPAFTH 561
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A1Z9U9X5_9GAMM (FAD-dependent oxidoreductase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9U9X5_9GAMM) HSP 1 Score: 309 bits (791), Expect = 1.790e-97 Identity = 142/195 (72.82%), Postives = 164/195 (84.10%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
VMA WINDG+QPMDIWDVD+RR+QPC NNKS+IVDRT+ESLGIAY+MHWPNRQWET R +K+S LH+RL VGA FGESAGWERPNW A + A Y YDFG+QNWF NN EH AVR AVG+F+QSSF K+LVQG+DAE VLNR+ATAN++V G V+YTQFLN GGVEADLTITRL + Y++VTAAFT TH
Sbjct: 363 VMAQWINDGVQPMDIWDVDIRRMQPCQNNKSFIVDRTIESLGIAYKMHWPNRQWETGRGIKKSVLHERLXKVGACFGESAGWERPNWYALPGEVAEYXYDFGKQNWFHNNASEHQAVRNAVGIFEQSSFQKILVQGKDAESVLNRVATANMSVANGTVVYTQFLNQIGGVEADLTITRLQANEYMVVTAAFTATH 557
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A1Z8WSA1_9GAMM (FAD-dependent oxidoreductase n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WSA1_9GAMM) HSP 1 Score: 305 bits (782), Expect = 3.730e-96 Identity = 141/196 (71.94%), Postives = 167/196 (85.20%), Query Frame = 1
Query: 1 YVMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
+V++ W+ DGIQPMDIWDVD+RR+ C+ NKS+IVDRT ESLGIAYQMHWPN+QWET RNVK+S LHDRL VGAVFG+SAGWER NW A+ Q+A Y YDF +QNWFENNR+EH AVRE VG+FDQSSFSK LVQG D+ +VLN++ATAN+ P+GKV+YTQFLN GGVEADLTITRL+E +L+VTAAFT TH
Sbjct: 361 HVLSRWLTDGIQPMDIWDVDIRRVPQCYXNKSFIVDRTSESLGIAYQMHWPNKQWETGRNVKKSVLHDRLENVGAVFGQSAGWERANWFADSGQKAEYKYDFFKQNWFENNRKEHEAVREHVGIFDQSSFSKFLVQGNDSLKVLNKLATANLDKPIGKVMYTQFLNNVGGVEADLTITRLSETEFLVVTAAFTATH 556
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A537AKR4_9PROT (FAD-dependent oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AKR4_9PROT) HSP 1 Score: 280 bits (715), Expect = 2.640e-86 Identity = 137/196 (69.90%), Postives = 154/196 (78.57%), Query Frame = 1
Query: 1 YVMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
+VM+HWI +G PMD+W V+VRR+QP NN Y+ DRTVESLGI YQ HWP RQW+TAR VK+S LHDRLAA GA FGESAGWERPNW A Q Y Y F NN EH AVRE VG+F+QSSF+KLLVQG DAE VLNRIATA+ VPVGKVIYTQFLNVRGG+EADLTI+RLA DR+L+VTAAFT TH
Sbjct: 362 HVMSHWIAEGHPPMDVWSVNVRRMQPWQNNLRYLRDRTVESLGIGYQDHWPFRQWQTARGVKKSVLHDRLAAAGACFGESAGWERPNWYAAPGQALRYEYAXXXXXXFGNNAEEHRAVREGVGMFEQSSFAKLLVQGLDAEAVLNRIATADCGVPVGKVIYTQFLNVRGGIEADLTISRLAIDRFLVVTAAFTQTH 557
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A0W1GC32_9SPHN (FAD-dependent oxidoreductase n=1 Tax=Sphingopyxis sp. H071 TaxID=1759078 RepID=A0A0W1GC32_9SPHN) HSP 1 Score: 273 bits (699), Expect = 5.810e-84 Identity = 129/195 (66.15%), Postives = 151/195 (77.44%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
V+AHWI +G PMD++D D+RR+ N Y+ DRTVESLGI YQ HWP RQWETAR+VK+ LHDR+AA GA FGESAGWERPNW A Y Y F RQNWFE N +EH AVRE VG+F+QSSFSK LVQG+DAE+VLN+I+ NVAV GK +YTQFLN RGG+EADLTITRL + YL+VTAAFTH+H
Sbjct: 362 VLAHWIVNGHPPMDVFDSDIRRVHDFQGNAKYLQDRTVESLGIGYQHHWPFRQWETARDVKKLVLHDRVAAAGACFGESAGWERPNWYAPAGVRPQYEYTFKRQNWFEYNAQEHRAVREKVGLFEQSSFSKFLVQGKDAEKVLNKISANNVAVIAGKAVYTQFLNERGGIEADLTITRLGAEEYLVVTAAFTHSH 556
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A3N9S1M9_9SPHN (FAD-dependent oxidoreductase n=1 Tax=Novosphingobium sp. LASN5T TaxID=2491021 RepID=A0A3N9S1M9_9SPHN) HSP 1 Score: 270 bits (690), Expect = 1.200e-82 Identity = 129/195 (66.15%), Postives = 151/195 (77.44%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
V+A+WI +G PMD++D D+RR+ N Y+ DRTVESLGI YQ HWP RQWE+ARNVK+ LHDR+AA GA FGESAGWERPNW A A Y Y + RQNWFE N +EH +VRE VGVF+QSSFSK LVQGRDAE+ LN I+ NVAVPVGK +YTQFLN RGG+EADLTITRL + +L+VTAAFTH H
Sbjct: 362 VVANWIVNGHPPMDVFDSDIRRVHDFQGNPKYLRDRTVESLGIGYQHHWPFRQWESARNVKKLVLHDRVAAAGACFGESAGWERPNWYAPAGVPALYEYTYKRQNWFEFNAQEHRSVRENVGVFEQSSFSKFLVQGRDAEKALNLISANNVAVPVGKAVYTQFLNERGGIEADLTITRLGLEEFLVVTAAFTHGH 556
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A1T4LN67_9HYPH (4-methylaminobutanoate oxidase (Formaldehyde-forming) n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4LN67_9HYPH) HSP 1 Score: 268 bits (685), Expect = 6.560e-82 Identity = 128/194 (65.98%), Postives = 153/194 (78.87%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHT 585
V+A WI DG PMD+WDVD+RR+ P N+ Y+ DRTVE+LG+ Y MHWP RQ ETAR V++SALHDRL A GA FGE+AGWERPNW A D A Y Y +GRQNWFE++ EH AVR VG+FDQSSF K L+QG DAE VLNRI+ +VAVPVG+++YTQ+LN RGG+EADLT+TR AEDR+LIVTAA T T
Sbjct: 361 VLADWIVDGHPPMDLWDVDIRRMMPFQRNRLYLRDRTVEALGLLYAMHWPFRQPETARGVRRSALHDRLLAAGACFGETAGWERPNWYAPKDVPARYDYSYGRQNWFEHSAAEHRAVRSNVGLFDQSSFGKYLLQGPDAEAVLNRISANDVAVPVGRIVYTQWLNERGGIEADLTVTREAEDRFLIVTAAATQT 554
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A7Y3GUR4_9DELT (GcvT family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GUR4_9DELT) HSP 1 Score: 265 bits (677), Expect = 9.790e-81 Identity = 124/195 (63.59%), Postives = 151/195 (77.44%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
VMAHWI DG PM++WDVD++R+ P NN Y+ DR VESLGIAYQ HWP RQWETAR VK+S LHDR+AA GA FGESAGWERPNW A+ + A Y Y + EH AVREAVGVF+Q+SFSKLLVQG DAE LNR++TA++A+ VG ++YTQFLN RGG+EAD+T++RL +R+L+VT AFTHTH
Sbjct: 364 VMAHWIVDGHPPMEVWDVDLQRMHPFRNNADYLCDRIVESLGIAYQHHWPARQWETARGVKKSILHDRVAAAGACFGESAGWERPNWYAKAGEPAVYEYSXXXXXXXXXSAEEHRAVREAVGVFEQTSFSKLLVQGADAEVALNRLSTADLAIEVGDLVYTQFLNPRGGIEADVTVSRLNPERFLVVTPAFTHTH 558
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Match: A0A3N5N8S6_9PROT (FAD-dependent oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5N8S6_9PROT) HSP 1 Score: 264 bits (675), Expect = 1.790e-80 Identity = 131/195 (67.18%), Postives = 150/195 (76.92%), Query Frame = 1
Query: 4 VMAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNRQWETARNVKQSALHDRLAAVGAVFGESAGWERPNWDAEGDQEAAYVYDFGRQNWFENNRREHLAVREAVGVFDQSSFSKLLVQGRDAERVLNRIATANVAVPVGKVIYTQFLNVRGGVEADLTITRLAEDRYLIVTAAFTHTH 588
VMAHWI +G PMD+W V++RR+ +N SY+ DRTVE+LGI YQ HWP RQ TAR VK+S LHDR+A GA FGESAGWERPNW AE Q+ Y Y N+ REH AVRE VG+F+QSSF+KLLVQG DAERVLNRIA ANVAV VGKV+YTQFLN RGG+EADLT+TRLA D YL+VTAAFT TH
Sbjct: 360 VMAHWIVNGHPPMDVWSVNLRRMHRWQSNPSYLRDRTVETLGIGYQDHWPFRQSLTARGVKKSILHDRMACAGACFGESAGWERPNWFAESGQQPVYQYXXXXXXXXXNSAREHRAVRERVGLFEQSSFAKLLVQGPDAERVLNRIANANVAVAVGKVVYTQFLNERGGIEADLTLTRLAADCYLVVTAAFTQTH 554 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111453.2377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111453.2377.1 >prot_M-pyrifera_M_contig111453.2377.1 ID=prot_M-pyrifera_M_contig111453.2377.1|Name=mRNA_M-pyrifera_M_contig111453.2377.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp MAHWINDGIQPMDIWDVDVRRIQPCHNNKSYIVDRTVESLGIAYQMHWPNback to top mRNA from alignment at M-pyrifera_M_contig111453:2..589- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111453.2377.1 ID=mRNA_M-pyrifera_M_contig111453.2377.1|Name=mRNA_M-pyrifera_M_contig111453.2377.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig111453:2..589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111453:2..589- >mRNA_M-pyrifera_M_contig111453.2377.1 ID=mRNA_M-pyrifera_M_contig111453.2377.1|Name=mRNA_M-pyrifera_M_contig111453.2377.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1164bp|location=Sequence derived from alignment at M-pyrifera_M_contig111453:2..589- (Macrocystis pyrifera P11B4 male)back to top |