prot_M-pyrifera_M_contig11130.2358.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11130.2358.1
Unique Nameprot_M-pyrifera_M_contig11130.2358.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length349
Homology
BLAST of mRNA_M-pyrifera_M_contig11130.2358.1 vs. uniprot
Match: D7FK56_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK56_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 4.570e-36
Identity = 160/385 (41.56%), Postives = 183/385 (47.53%), Query Frame = 0
Query:    1 PFLPGLFLLVLNLVRLSKV-----LASSLTYLDARDNRVAGPADAHAPYLAALGRLKTLLLMSPGGG---QPNPICASRGYRRGVFDAARSLLTLDGTVDETVDGXXXXXXXXXXXXXXXXXXXXXXXXXXGDHAPSGTAANSAAANGDVTLAGVQPALDHEVEFQAAVGAGVGEAGAALEEVP-TPRFDAVADRFRSRRGRMM-------------------------RGGDRRAGEEEGDSEVSFGGGSMSSFGAAGSEGWSEGGNGQMREGVGVGGSRK-----GGAGALLQDLEEAAVVDGEVTRGXXXXXXXXXXXXRKGWGRGTAFAGHVAPAGKEGVSGVAGPLGDDVAEEHGLLSRLRSVAQEARLEVMDSRLQDLH 346
            PFLPGL  L++   RL+ +     LASSLT+LDARDNR+AGPA AHAP+LAALGRL++L L S G G   QPNPICA RGYR  VF AARSL TLDG                     XXXXXXXXXXXXX          ++ AA+        +P  D     + A+      A  A EEVP  PRFDA+A RFR R                              R   + AG E   S+                 GWSEG    +RE    G         G AG +  +   A  V G    G              G GRG            +G SGV   LG+DVAEEHGLLSRLRSVAQEARLEVMDSRLQDLH
Sbjct:  133 PFLPGLRRLLVPYNRLTSLDGVQALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREDVFAAARSLKTLDGENASFFFEDRETAATPAEAAAXXXXXXXXXXXXXXXXXXXDVTEDTPAAS--------EPGGDRNAAAETAIPVAAVTALVAPEEVPIAPRFDALAGRFRHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRVAVQSAGVESSSSDA----------------GWSEGDGDGLRESHAEGFDADSFGVVGSAGRVDTEETAARAVPGRRKDG--------------GGGRGIF----------DGESGVREALGEDVAEEHGLLSRLRSVAQEARLEVMDSRLQDLH 469          
BLAST of mRNA_M-pyrifera_M_contig11130.2358.1 vs. uniprot
Match: A0A6H5KTU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU3_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.040e-28
Identity = 162/390 (41.54%), Postives = 184/390 (47.18%), Query Frame = 0
Query:    1 PFLPGLFLLVLNLVRLSKV-----LASSLTYLDARDNRVAGPADAHAPYLAALGRLKTLLLMSPGGG---QPNPICASRGYRRGVFDAARSLLTLDG-----------TVDETVDGXXXXXXXXXXXXXXXXXXXXXXXXXXGDHAPSGTAANSAAANGDVTLAGVQPALDH--EVEFQAAVGAGVGEAGAALEEVPTPRFDAVADRFRSRRGRMMRGGDRR---------------------AGEEEGDSEVSFGGGSMSSFGAAGSEGWSEGGNGQMREGVGVGGSRKGGAGALLQDLEEAAV--VDGEVTRGXXXXXXXXXXXXRKGWGRGTAFAGHVAPAGKEGVSGVAGPLGDDVAEEHGLLSRLRSVAQEARLEVMDSRLQDLH 346
            PFLPGL  L++   RL+ +     LASSLT+LDARDNR+AGPA AHAP+LAALGRL++L L S G G   QPNPICA RGYR  VF AARSL TLDG           T     +    XXXXXXXXXXXXXXXXXXXXXX    A       +AAA   + +A V+ A               G G                       R G    GG  R                     AG E   S+  +  G   S   + +EG+     G +  G  V             D EE A   V G  T G              G GRG            +G SGV   LG+DVAEEHGLLSRLRSVAQEARLEVMDSRLQDLH
Sbjct:   56 PFLPGLRRLLVPYNRLTSLDGVQALASSLTHLDARDNRIAGPAGAHAPHLAALGRLESLALASVGRGRRVQPNPICACRGYREEVFAAARSLKTLDGESASFVLEDRETAATPAEAAAKXXXXXXXXXXXXXXXXXXXXXXDTPAASEPRGGRNAAAETAIPVAAVRRASGPIPXXXXXXXXXCGGGXXXXXXXXXXXXXXXXXXXXXXXRPGVAAEGGGGRGRCLXXXXXXXTSSPRVAVQSAGVESSSSDAGWSEGDGDSLQESHAEGFDADSFGVVESGGRV-------------DTEETAARAVPGRRTGG--------------GGGRGNF----------DGESGVREVLGEDVAEEHGLLSRLRSVAQEARLEVMDSRLQDLH 408          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11130.2358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK56_ECTSI4.570e-3641.56Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KTU3_9PHAE2.040e-2841.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..349
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.881

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11130contigM-pyrifera_M_contig11130:400..1638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11130.2358.1mRNA_M-pyrifera_M_contig11130.2358.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11130 400..1638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11130.2358.1 ID=prot_M-pyrifera_M_contig11130.2358.1|Name=mRNA_M-pyrifera_M_contig11130.2358.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=349bp
PFLPGLFLLVLNLVRLSKVLASSLTYLDARDNRVAGPADAHAPYLAALGR
LKTLLLMSPGGGQPNPICASRGYRRGVFDAARSLLTLDGTVDETVDGTVG
GSIDGTVGGVVGETVDGAVGGTVGDHAPSGTAANSAAANGDVTLAGVQPA
LDHEVEFQAAVGAGVGEAGAALEEVPTPRFDAVADRFRSRRGRMMRGGDR
RAGEEEGDSEVSFGGGSMSSFGAAGSEGWSEGGNGQMREGVGVGGSRKGG
AGALLQDLEEAAVVDGEVTRGGGGSGGGGGGGGRKGWGRGTAFAGHVAPA
GKEGVSGVAGPLGDDVAEEHGLLSRLRSVAQEARLEVMDSRLQDLHVSE
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