mRNA_M-pyrifera_M_contig111206.2342.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111206.2342.1
Unique NamemRNA_M-pyrifera_M_contig111206.2342.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: A0A7S4IIG8_9EUKA (Carboxypeptidase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IIG8_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 1.160e-29
Identity = 44/81 (54.32%), Postives = 64/81 (79.01%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAANKSVVENANSWNRVANVIYV 243
            F QFSGY+++N++  + MFYWFV+SQ +PA+DP+++WLQGGPGC+G    F+EHGP+ I  +  +V N  SWNR+ANV+Y+
Sbjct:   12 FNQFSGYLTLNATTDKSMFYWFVESQNNPANDPLLIWLQGGPGCSGLIGFFQEHGPFLINTSGELVSNPYSWNRLANVVYI 92          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: A0A6M2CHH8_RHIMP (Putative serine carboxypeptidase n=4 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CHH8_RHIMP)

HSP 1 Score: 108 bits (269), Expect = 7.220e-26
Identity = 47/82 (57.32%), Postives = 66/82 (80.49%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAAN-KSVVENANSWNRVANVIYV 243
            F+Q+SG++  N+ ATR+MFYWFV SQ +P  DP++LWL  GPGC+    +F+EHGP+R+A N KS+VENA SWN++ANV+Y+
Sbjct:   39 FKQYSGFL--NAGATRKMFYWFVASQETPEKDPLLLWLDAGPGCSSMVTMFKEHGPFRVADNGKSLVENAYSWNKLANVLYL 118          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: A0A2P6MWN2_9EUKA (Carboxypeptidase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MWN2_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 6.030e-25
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAAN-KSVVENANSWNRVANVIYV 243
            F+Q++GY++V+ S  RR+FYWFV+SQ SP  DPVVLWL GGPGC+     F EHGP+R  ++ K+V  N  SWNRVAN++Y+
Sbjct:  208 FKQYAGYITVDKSINRRLFYWFVESQSSPTDDPVVLWLNGGPGCSSLGGFFTEHGPFRPNSDGKTVSINPYSWNRVANMLYL 289          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: B5Y4V6_PHATC (Carboxypeptidase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4V6_PHATC)

HSP 1 Score: 102 bits (254), Expect = 8.910e-24
Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAANKSVVENANSWNRVANVIY 240
            FEQFSGY+ V  SATR +FYW+++SQ  PA+DPVVLW  GGPGC+G   +  EHGP+ I+ +  + +N  SWN+VAN+IY
Sbjct:   65 FEQFSGYLDV--SATRHIFYWYMESQSDPANDPVVLWTNGGPGCSGLLGMGAEHGPFYISKSGRLHDNPYSWNKVANMIY 142          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: A0A1E1XES0_9ACAR (Putative serine carboxypeptidase lysosomal cathepsin a (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XES0_9ACAR)

HSP 1 Score: 102 bits (253), Expect = 1.150e-23
Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAAN-KSVVENANSWNRVANVIYV 243
            F+Q++G++S     TR+MFYWFV SQ SPA DP++LWL GGPGC+   ++ +EHGP+R+A N K++V N  SWN++ANV+Y+
Sbjct:   25 FKQYAGFLSAG--PTRKMFYWFVASQGSPAKDPLMLWLDGGPGCSSMVSLLKEHGPFRVADNGKALVANPYSWNKLANVLYL 104          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: UPI00189899B6 (lysosomal protective protein-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI00189899B6)

HSP 1 Score: 101 bits (251), Expect = 1.510e-23
Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIA-ANKSVVENANSWNRVANVIYV 243
            F+ +SG+++V   ATR+MFYWFV SQ +P  DPV+LWL GGPGC+    V +EHGP+R+A   KS+V N  SWN++ANV+Y+
Sbjct:   39 FKHYSGFLNVG--ATRKMFYWFVASQGTPEKDPVLLWLDGGPGCSAMVTVLKEHGPFRVADEGKSLVVNPYSWNKLANVLYL 118          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: L8GKQ9_ACACA (Carboxypeptidase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GKQ9_ACACA)

HSP 1 Score: 101 bits (252), Expect = 1.650e-23
Identity = 44/82 (53.66%), Postives = 62/82 (75.61%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAANKSVV-ENANSWNRVANVIYV 243
            F Q++GYV+V  S+ R +FYWFV+SQR+PA DPVVLWL GGPGC+  +A+  E+GP+R+  +   + ++  SWN VAN+IYV
Sbjct:   47 FNQWTGYVNVRPSSGRHLFYWFVESQRNPAHDPVVLWLTGGPGCSSIFALLTENGPFRVEDDAFTLRKHLQSWNTVANIIYV 128          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: A0A7S4HMM0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HMM0_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 1.680e-23
Identity = 41/81 (50.62%), Postives = 57/81 (70.37%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAANKSVVENANSWNRVANVIYV 243
            F+Q+SGYV++      +MFYWFV+SQ +P +DPVVLWL GGPGC+       E+GP+   A   +VEN  SWNR+AN++Y+
Sbjct:   48 FDQYSGYVNITGFG--QMFYWFVESQNNPVTDPVVLWLNGGPGCSSLNGFLSENGPWFPNATLQLVENPYSWNRIANMLYI 126          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: A0A7S4IGU3_9EUKA (Carboxypeptidase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IGU3_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 1.710e-23
Identity = 43/90 (47.78%), Postives = 62/90 (68.89%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRI---------AANKSVVENANSWNRVANVIYV 243
            F+Q++GY++V+ SA R +FYWFV+SQ SP+SDPVVLWL GGPGC+       EHGP+R          + N ++  N  SWN++AN++Y+
Sbjct:   37 FDQYAGYITVDDSAGRALFYWFVESQNSPSSDPVVLWLNGGPGCSSLDGFLYEHGPFRFDRSGTGNIFSHNDTLRSNPFSWNKMANMLYL 126          
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Match: A0A7R9ZG19_9STRA (Carboxypeptidase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZG19_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.490e-23
Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 1
Query:    1 FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAVFEEHGPYRIAANKSVVENANSWNRVANVIYV 243
            F  F+GY++V+ +  R +FYW+V+SQR PA DPVV W  GGPGC+G   + +EHGP+ I+A+  +  N  SWN+VAN++YV
Sbjct:  165 FRMFAGYLTVSETNERNIFYWYVESQRDPAGDPVVFWTNGGPGCSGMLGLGQEHGPFDISADGYLAPNHYSWNKVANMLYV 245          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111206.2342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4IIG8_9EUKA1.160e-2954.32Carboxypeptidase (Fragment) n=1 Tax=Vannella sp. C... [more]
A0A6M2CHH8_RHIMP7.220e-2657.32Putative serine carboxypeptidase n=4 Tax=Rhipiceph... [more]
A0A2P6MWN2_9EUKA6.030e-2556.10Carboxypeptidase n=1 Tax=Planoprotostelium fungivo... [more]
B5Y4V6_PHATC8.910e-2456.25Carboxypeptidase n=1 Tax=Phaeodactylum tricornutum... [more]
A0A1E1XES0_9ACAR1.150e-2353.66Putative serine carboxypeptidase lysosomal catheps... [more]
UPI00189899B61.510e-2354.88lysosomal protective protein-like n=1 Tax=Dermacen... [more]
L8GKQ9_ACACA1.650e-2353.66Carboxypeptidase n=1 Tax=Acanthamoeba castellanii ... [more]
A0A7S4HMM0_9EUKA1.680e-2350.62Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A7S4IGU3_9EUKA1.710e-2347.78Carboxypeptidase (Fragment) n=1 Tax=Vannella sp. C... [more]
A0A7R9ZG19_9STRA2.490e-2350.62Carboxypeptidase n=1 Tax=Pseudictyota dubia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111206contigM-pyrifera_M_contig111206:350..592 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.9
Seed ortholog evalue2.9e-19
Seed eggNOG ortholog2850.Phatr18551
KEGG rclassRC00597,RC00598,RC00784,RC02852
KEGG koko:K08249,ko:K13289,ko:K16296,ko:K16297
KEGG ReactionR01409,R02676,R02811
KEGG Pathwayko00460,ko01110,ko04142,ko04614,map00460,map01110,map04142,map04614
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005575,GO:0005576,GO:0005615,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005911,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009056,GO:0009057,GO:0009505,GO:0009506,GO:0009719,GO:0009725,GO:0009741,GO:0009742,GO:0009755,GO:0009987,GO:0010033,GO:0014070,GO:0016787,GO:0017171,GO:0019538,GO:0023052,GO:0030054,GO:0030163,GO:0030312,GO:0032870,GO:0033993,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043401,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0048545,GO:0050789,GO:0050794,GO:0050896,GO:0051603,GO:0051716,GO:0055044,GO:0065007,GO:0070008,GO:0070011,GO:0070887,GO:0071310,GO:0071367,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1901701
EggNOG free text desc.PFAM Peptidase S10, serine carboxypeptidase
EggNOG OGsCOG2939@1,KOG1282@2759
EC3.4.16.5,4.1.2.11
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110,ko04131,ko04147
Exons1
Model size243
Cds size243
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815624.1400301-CDS-M-pyrifera_M_contig111206:349..5921622815624.1400301-CDS-M-pyrifera_M_contig111206:349..592Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111206 350..592 +
1692277492.914683-CDS-M-pyrifera_M_contig111206:349..5921692277492.914683-CDS-M-pyrifera_M_contig111206:349..592Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111206 350..592 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111206.2342.1prot_M-pyrifera_M_contig111206.2342.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111206 350..592 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111206.2342.1

>prot_M-pyrifera_M_contig111206.2342.1 ID=prot_M-pyrifera_M_contig111206.2342.1|Name=mRNA_M-pyrifera_M_contig111206.2342.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=81bp
FEQFSGYVSVNSSATRRMFYWFVQSQRSPASDPVVLWLQGGPGCAGTWAV
FEEHGPYRIAANKSVVENANSWNRVANVIYV
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mRNA from alignment at M-pyrifera_M_contig111206:350..592+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111206.2342.1 ID=mRNA_M-pyrifera_M_contig111206.2342.1|Name=mRNA_M-pyrifera_M_contig111206.2342.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=243bp|location=Sequence derived from alignment at M-pyrifera_M_contig111206:350..592+ (Macrocystis pyrifera P11B4 male)
TTCGAACAGTTCAGTGGCTACGTCTCAGTGAACAGCAGCGCCACGAGGAG AATGTTCTATTGGTTCGTGCAGTCACAGCGCTCTCCTGCCTCAGATCCTG TGGTGCTGTGGCTCCAGGGAGGCCCGGGGTGCGCTGGCACCTGGGCTGTG TTCGAGGAGCACGGCCCCTACCGCATTGCCGCCAACAAGAGCGTTGTCGA GAACGCCAACAGCTGGAACAGAGTCGCAAACGTCATTTACGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig111206:350..592+

>mRNA_M-pyrifera_M_contig111206.2342.1 ID=mRNA_M-pyrifera_M_contig111206.2342.1|Name=mRNA_M-pyrifera_M_contig111206.2342.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig111206:350..592+ (Macrocystis pyrifera P11B4 male)
TTCGAACAGTTCAGTGGCTACGTCTCAGTGAACAGCAGCGCCACGAGGAG
AATGTTCTATTGGTTCGTGCAGTCACAGCGCTCTCCTGCCTCAGATCCTG
TGGTGCTGTGGCTCCAGGGAGGCCCGGGGTGCGCTGGCACCTGGGCTGTG
TTCGAGGAGCACGGCCCCTACCGCATTGCCGCCAACAAGAGCGTTGTCGA
GAACGCCAACAGCTGGAACAGAGTCGCAAACGTCATTTACGTCTTCGAAC
AGTTCAGTGGCTACGTCTCAGTGAACAGCAGCGCCACGAGGAGAATGTTC
TATTGGTTCGTGCAGTCACAGCGCTCTCCTGCCTCAGATCCTGTGGTGCT
GTGGCTCCAGGGAGGCCCGGGGTGCGCTGGCACCTGGGCTGTGTTCGAGG
AGCACGGCCCCTACCGCATTGCCGCCAACAAGAGCGTTGTCGAGAACGCC
AACAGCTGGAACAGAGTCGCAAACGTCATTTACGTC
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