mRNA_M-pyrifera_M_contig1011.234.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: D7FYI4_ECTSI (S5 DRBM domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7FYI4_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 1.320e-154 Identity = 222/230 (96.52%), Postives = 226/230 (98.26%), Query Frame = 1 Query: 79 DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTPKAAE 768 DDDKEWVP+TKLGRLVKENKIKSLEDIYLFSMAIK EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDE+GHVGLGVKCAKEVATAIRGAII AKMSVVPVRRGYWGRRNG+PHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELW PT+FQSAPYQEHTDFLAKNP PKAAE Sbjct: 52 DDDKEWVPITKLGRLVKENKIKSLEDIYLFSMAIK-EYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAE 280
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A835Z6C9_9STRA (40S ribosomal protein S2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C9_9STRA) HSP 1 Score: 379 bits (972), Expect = 1.730e-129 Identity = 190/220 (86.36%), Postives = 201/220 (91.36%), Query Frame = 1 Query: 88 KEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKN 747 KEWVPVTKLGRLVKE KIKSLE+IY FSM I+ E QIVD FLG KLKDEVMKIMPVQKVSAAGQITRFKAFVAVGD NGHVGLGVKCAKEVATAIRGAI AKMSVVP+RRGYWGRRNG PHTVP KVTGKCGSVRVRLIPAPRGTGLVA+PV +KLL MAGVEDCYT S GHTRT+GNFVKAV+FAL KTYGYLSPELW PT F+++PYQEHTDFLAK+ Sbjct: 31 KEWVPVTKLGRLVKEEKIKSLEEIYSFSMRIQ-ECQIVDKFLGDKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDSNGHVGLGVKCAKEVATAIRGAITIAKMSVVPIRRGYWGRRNGQPHTVPCKVTGKCGSVRVRLIPAPRGTGLVASPVSRKLLGMAGVEDCYTCSNGHTRTMGNFVKAVFFALGKTYGYLSPELWAPTQFKASPYQEHTDFLAKS 249
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A7S4UVA6_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4UVA6_9DINO) HSP 1 Score: 359 bits (922), Expect = 1.590e-121 Identity = 181/222 (81.53%), Postives = 199/222 (89.64%), Query Frame = 1 Query: 79 DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 744 D DKEWVPVTKLGRLVK+ KIKSLE+IYL+S+ IK EYQIVD+FL + LKDEVMKIMPVQK SAAGQ TRFKAFVAVGD NGHVGLGVKCA EVATAIRGAII AK+SVVP+RRGYWG++ GLPHTV NKVTGKCGSV VRLIPAPRGTGLVA+PVPKKLL MAGVED Y+ S GHTRT+GNF+KAVY AL+KTYGYLSPELW PT+F PYQE+TDFL+K Sbjct: 41 DGDKEWVPVTKLGRLVKDGKIKSLEEIYLYSLPIK-EYQIVDYFLPN-LKDEVMKIMPVQKQSAAGQRTRFKAFVAVGDYNGHVGLGVKCASEVATAIRGAIILAKISVVPIRRGYWGKKVGLPHTVANKVTGKCGSVSVRLIPAPRGTGLVASPVPKKLLGMAGVEDVYSQSTGHTRTMGNFIKAVYTALSKTYGYLSPELWKPTVFTPTPYQEYTDFLSK 260
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A7S2BZ58_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZ58_9STRA) HSP 1 Score: 357 bits (916), Expect = 2.780e-120 Identity = 181/238 (76.05%), Postives = 204/238 (85.71%), Query Frame = 1 Query: 79 DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTPKAAEA*ALNPKP 792 DDDKEWVP+TKLGRLVKE KIKSLE+I+LFSM IK EYQIVD FLG+KLKDEVM IMPVQK + AGQ TRFKAFVAVGD +GHVGLGVKCAKEVATAIRGAII AKM+++P+RRG+WG++ G PHTV K+TGKCGSVRVRLIPAPRGTGLVAAP KK+L+MAG++DCYTSSRGHTRT+GNF+KA +FALAK+YGYLSPELW T F P+QEHTDFL KN K A PKP Sbjct: 63 DDDKEWVPITKLGRLVKEQKIKSLEEIFLFSMPIK-EYQIVDLFLGTKLKDEVMGIMPVQKQTTAGQRTRFKAFVAVGDFSGHVGLGVKCAKEVATAIRGAIIMAKMNIIPIRRGFWGKQVGQPHTVSQKLTGKCGSVRVRLIPAPRGTGLVAAPATKKILAMAGLDDCYTSSRGHTRTMGNFIKACFFALAKSYGYLSPELWPETQFLPPPFQEHTDFL-KNAGGKEAA-----PKP 293
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A484DZT2_BRELC (S5 DRBM domain-containing protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DZT2_BRELC) HSP 1 Score: 352 bits (904), Expect = 4.940e-119 Identity = 197/246 (80.08%), Postives = 217/246 (88.21%), Query Frame = 1 Query: 10 RGGFGRXXXXXXXXXXXXXXXXX-DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 744 RGGFGRXXXXXXXXXXXXXXXXX ++ KEWVPVTKLGRLVKE KI SLE+IYLFS+ IK E +IV++FL + LKDEVMKIMPVQK + AGQ TRFKAFVAVGD NGH+GLGVKCAKEVATAIRGAII AK+S+VPVRRGYWGR G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL TY YL+P+LW F +PYQE+TDFLAK Sbjct: 12 RGGFGRXXXXXXXXXXXXXXXXXXEESKEWVPVTKLGRLVKEGKISSLEEIYLFSLPIK-ECEIVNYFLEASLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDSNGHIGLGVKCAKEVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWEQHTFGQSPYQEYTDFLAK 256
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: K3X0V8_GLOUD (S5 DRBM domain-containing protein n=5 Tax=Oomycota TaxID=4762 RepID=K3X0V8_GLOUD) HSP 1 Score: 352 bits (902), Expect = 9.260e-119 Identity = 193/249 (77.51%), Postives = 214/249 (85.94%), Query Frame = 1 Query: 4 TGRGGFGRXXXXXXXXXXXXXXXXX--DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 744 T RGGFGR XXXXXXXXX XXXX DD+KEWVPVTKLGRLVKE KI SLE+IYLFS+ IK E +IV+ FL ++LKDEVMKIMPVQK + AGQ TRFKAFVAVGD NGH+GLGVKCAKEVAT+IRGAII AK+++VPVRRGYWG G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAP PKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL TY YL+P+LW F ++PYQEHTDFLAK Sbjct: 7 TQRGGFGRGRGXXXXXXXXXRXXXXGGDDNKEWVPVTKLGRLVKEGKISSLEEIYLFSLPIK-ECEIVNHFLEAQLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDHNGHIGLGVKCAKEVATSIRGAIILAKIALVPVRRGYWGLMIGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPAPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWEQHSFAASPYQEHTDFLAK 254
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: M4BLS4_HYAAE (S5 DRBM domain-containing protein n=19 Tax=Oomycota TaxID=4762 RepID=M4BLS4_HYAAE) HSP 1 Score: 351 bits (900), Expect = 1.290e-117 Identity = 195/247 (78.95%), Postives = 214/247 (86.64%), Query Frame = 1 Query: 10 RGGFGRXXXXXXXXXXXXXXXXX--DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAK 744 RGGFGR XXXXXXXXXXX XXXX ++ KEWVPVTKLGRLVKE KI SLE+IYLFS+ IK E +IV++FL S LKDEVMKIMPVQK + AGQ TRFKAFVAVGD NGH+GLGVKCAKEVATAIRGAII AK+S+VPVRRGYWGR G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+EDCYTS+RGHTRT+GNFVKA ++AL TY YL+P+LW F +PYQ HTDFLAK Sbjct: 65 RGGFGRGXXXXXXXXXXXRXXXXXXEESKEWVPVTKLGRLVKEGKIGSLEEIYLFSLPIK-ECEIVNYFLESSLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDSNGHIGLGVKCAKEVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEDCYTSARGHTRTMGNFVKATFYALRATYAYLTPDLWEQHSFVPSPYQAHTDFLAK 310
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A6S7JAX4_PARCT (40S ribosomal protein S2 n=4 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7JAX4_PARCT) HSP 1 Score: 350 bits (899), Expect = 1.440e-117 Identity = 175/230 (76.09%), Postives = 196/230 (85.22%), Query Frame = 1 Query: 82 DDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTPKAAEA 771 DDKEWVPVTKLGRLVKE KIKSLE IYLFS+ IK E++I+DFFLG+ LKDEV+KIMPVQK + AGQ TRFKAFVA+GD NGHVGLGVKC+KEVATAIRGAII AK+SV+PVRRGYWG + G PHTVP KVTGKCGSVRVRLIPAPRGTG+V+APVPKKLL MAG++DCYTS+RG T TLGNF KA + A+AKTY YL+P+LW F PYQE TDFLAK PK A A Sbjct: 66 DDKEWVPVTKLGRLVKELKIKSLEQIYLFSLPIK-EFEIIDFFLGAALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDHNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVRVRLIPAPRGTGIVSAPVPKKLLQMAGIDDCYTSARGATATLGNFAKATFQAIAKTYEYLTPDLWGENKFTKVPYQEFTDFLAKPVLPKPAPA 294
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: RS2_URECA (40S ribosomal protein S2 n=1 Tax=Urechis caupo TaxID=6431 RepID=RS2_URECA) HSP 1 Score: 348 bits (893), Expect = 4.170e-117 Identity = 173/238 (72.69%), Postives = 200/238 (84.03%), Query Frame = 1 Query: 79 DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTPKAAEA*ALNPKP 792 D DKEWVPVTKLGRLVK+ KIK+LE+IYLFS+ IK E++I+DFFLG LKDEV+KIMPVQK + AGQ TRFKAFVA+GD NGHVGLGVKC+KEVATAIRGAII AK+SVVPVRRGYWG + G PHTVP KVTGKCGSV VRLIPAPRGTG+V+APVPKKLL+MAG++DCYTS+RG T TLGNF KA Y A+A TY YL+P+LW T+F +PYQE+TD+LAK+ A A KP Sbjct: 41 DGDKEWVPVTKLGRLVKDMKIKTLEEIYLFSLPIK-EFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAKATYAAIAATYSYLTPDLWRETVFTKSPYQEYTDYLAKHHGRGAVTAHPTEEKP 277
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Match: A0A0P5E9E5_9CRUS (40S ribosomal protein S2 (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5E9E5_9CRUS) HSP 1 Score: 348 bits (892), Expect = 4.970e-117 Identity = 167/226 (73.89%), Postives = 198/226 (87.61%), Query Frame = 1 Query: 79 DDDKEWVPVTKLGRLVKENKIKSLEDIYLFSMAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENGHVGLGVKCAKEVATAIRGAIITAKMSVVPVRRGYWGRRNGLPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWTPTLFQSAPYQEHTDFLAKNPTP 756 + +KEWVPVTKLGRLV++ KI++LE+IYLFS+ IK E++I+DFFLG+ LKDEV+KIMPVQK + AGQ TRFKAFVA+GD NGH+GLGVKC+KEVATAIRGAII AK+SVVPVRRGYWG + G PHTVP KVTGKCGSV VRLIP PRGTG+V+APVPKKLL MAG+EDCYT++RG T TLGNF KA Y A+AKTY YL+P+LWT T+F ++PYQEH+DFL KN P Sbjct: 38 EGEKEWVPVTKLGRLVRDGKIRTLEEIYLFSLPIK-EFEIIDFFLGTALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHIGLGVKCSKEVATAIRGAIIMAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPGPRGTGIVSAPVPKKLLQMAGIEDCYTAARGSTGTLGNFAKATYAAIAKTYAYLTPDLWTETVFNNSPYQEHSDFLMKNHRP 262 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1011.234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1011.234.1 >prot_M-pyrifera_M_contig1011.234.1 ID=prot_M-pyrifera_M_contig1011.234.1|Name=mRNA_M-pyrifera_M_contig1011.234.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp MAIKAEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDENback to top mRNA from alignment at M-pyrifera_M_contig1011:150..5583- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1011.234.1 ID=mRNA_M-pyrifera_M_contig1011.234.1|Name=mRNA_M-pyrifera_M_contig1011.234.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5434bp|location=Sequence derived from alignment at M-pyrifera_M_contig1011:150..5583- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1011:150..5583- >mRNA_M-pyrifera_M_contig1011.234.1 ID=mRNA_M-pyrifera_M_contig1011.234.1|Name=mRNA_M-pyrifera_M_contig1011.234.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1206bp|location=Sequence derived from alignment at M-pyrifera_M_contig1011:150..5583- (Macrocystis pyrifera P11B4 male)back to top |