mRNA_M-pyrifera_M_contig11116.2326.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11116.2326.1
Unique NamemRNA_M-pyrifera_M_contig11116.2326.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: D8LFG3_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG3_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 3.100e-122
Identity = 184/205 (89.76%), Postives = 199/205 (97.07%), Query Frame = 1 
Query:    1 EDGRDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            EDG+ FLS+A+DV+++TGVRTGAIRS+QAARATA+TA DVALNVLGGVRDGTG VETL+ SPPSVLRKLCERMGATYIKVGQF+ASSPTLFPA+YVKEFQKCLD+TD+IPWSTMRPIIEKDLGKR+TEV+SSINTVPLASASIAQVY A LKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR
Sbjct:   69 EDGQSFLSLAIDVVSNTGVRTGAIRSSQAARATASTAIDVALNVLGGVRDGTGPVETLKKSPPSVLRKLCERMGATYIKVGQFIASSPTLFPADYVKEFQKCLDKTDNIPWSTMRPIIEKDLGKRITEVFSSINTVPLASASIAQVYAATLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 273
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A6H5KMH0_9PHAE (ABC1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH0_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 5.480e-119
Identity = 183/204 (89.71%), Postives = 198/204 (97.06%), Query Frame = 1 
Query:    4 DGRDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            DG+ FLS+A+DV+++TGVRTGAIRS+QAARATA+TA DVALNVLGGVRDGTG VETL+ SPPSVLRKLCERMGATY+KVGQF+ASSPTLFPA+YVKEFQKCLD+TD+IPWSTMRPIIEKDLGKRVTEV+SSINTVPLASASIAQVY A LKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR
Sbjct:   89 DGQSFLSLAIDVVSNTGVRTGAIRSSQAARATASTAIDVALNVLGGVRDGTGPVETLKKSPPSVLRKLCERMGATYVKVGQFIASSPTLFPADYVKEFQKCLDKTDNIPWSTMRPIIEKDLGKRVTEVFSSINTVPLASASIAQVYAATLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 292
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A7S2F4J6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2F4J6_9DINO)

HSP 1 Score: 182 bits (463), Expect = 2.580e-55
Identity = 85/141 (60.28%), Postives = 118/141 (83.69%), Query Frame = 1 
Query:  193 VLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            +LR+L ER+GATY+K+GQF+ASSPT+FPA+YV+EFQ+CLD T ++P+S +R IIE DLG    +V+S ++ VP+ASASIAQV+ ARL TGE+VV+KVQKPG+ EVL+TDLGF+Y+ S+++E +NP   SR S++DI  D+R
Sbjct:    6 LLRRLFERLGATYVKLGQFIASSPTVFPADYVREFQQCLDSTSTVPFSDVRKIIEDDLGMPTGKVFSHLDPVPMASASIAQVHAARLLTGEEVVVKVQKPGIEEVLQTDLGFVYLASRVLEFINPELNSRGSLADIASDLR 146
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A7S4RD62_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RD62_9DINO)

HSP 1 Score: 190 bits (483), Expect = 3.250e-54
Identity = 101/204 (49.51%), Postives = 142/204 (69.61%), Query Frame = 1 
Query:    4 DGRDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            D +  L    DV   TG  TG  R+ Q A+A A TA ++       + +   A          +LR+L ER+GATY+K+GQF+ASSPT+FPA+YV+EFQ+CLD T+++P+S +R IIE DLG   ++V+S ++ VP+ASASIAQV+ A L TGEDVV+KVQKPG+ EVL+TDLGF+Y+ S+++E +NP   SR S++DI  D+R
Sbjct:   96 DVQRLLRDVSDVALSTGFETGFTRAAQGAQAAAFTAAELVREPPQELNEAFAA---------RLLRRLFERLGATYVKLGQFIASSPTVFPADYVREFQQCLDSTNTVPFSEIRKIIEDDLGMPTSKVFSYLDPVPMASASIAQVHAATLVTGEDVVVKVQKPGIEEVLQTDLGFVYLASRVLEFINPELNSRGSLADIASDLR 290
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A6T5M278_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5M278_HETAK)

HSP 1 Score: 187 bits (476), Expect = 8.500e-54
Identity = 107/212 (50.47%), Postives = 147/212 (69.34%), Query Frame = 1 
Query:    1 EDGRDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSP-------PSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            E+G   L  A  V   TG R+ A R+ QA RA A T+ D+              ++ LR  P       P +LR L ER+GATY+K+GQFVASSPTLFPA YV+EFQKCLDQT S+P++ +R II +++G   ++ ++SI+  PLASAS+AQV+ A LKTGE VV+KVQKPGVA++LK DLGF+Y+TS+++EL++P    R++++DI GDIR
Sbjct:   28 EEGGRVLREAAAVARATGARSTARRTAQAYRAAAQTSLDL--------------LQELRRDPRPENLPYPRLLRALFERLGATYVKLGQFVASSPTLFPAEYVREFQKCLDQTPSVPYAEIRRIIAEEIGNPDSK-FASIDPKPLASASVAQVHAATLKTGERVVLKVQKPGVADILKADLGFLYVTSRVLELLSPELG-RVALADIAGDIR 223
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A7S0AMY5_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AMY5_9DINO)

HSP 1 Score: 188 bits (477), Expect = 4.280e-53
Identity = 102/204 (50.00%), Postives = 138/204 (67.65%), Query Frame = 1 
Query:    4 DGRDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            D +  L    +V    G+ T   R+ Q A+A A TA +V       + +   A          +LR+L ER+GATY+K+GQF+ASSPT+FPA+YV+EFQKCLD T ++P+S +R IIE DLG     V+S ++ VP+ASASIAQV+ A L TGEDVV+KVQKPG+ EVLKTDLGF+YI S+++E +NP   SR S++DI  D+R
Sbjct:  120 DAQRLLGEISEVSLSAGLGTSLTRAAQGAQAAALTAAEVVREPPEELNEAFFA---------RLLRRLFERLGATYVKLGQFIASSPTVFPADYVREFQKCLDSTGTVPFSEVRRIIEDDLGMPTRSVFSYLDPVPMASASIAQVHAATLVTGEDVVVKVQKPGIEEVLKTDLGFVYIASRVLEFINPELNSRGSLADIASDLR 314
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A7S4N0D6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N0D6_GUITH)

HSP 1 Score: 185 bits (470), Expect = 2.250e-52
Identity = 103/200 (51.50%), Postives = 139/200 (69.50%), Query Frame = 1 
Query:   16 FLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
             +  A  + ++T  + G  R+ QAARA   T  ++  N+    R  T   E + +  P+ +R+L E +GATY+K+GQFVASSPTLFPA YVKEFQKCLD T+S+P+S ++ IIE DL   ++  YS ++  PLASASIAQV+ A+LKTGEDVVIKVQKPGV  +LK DL F+  +SK++E +NP F  RLS++DI  DIR
Sbjct:   84 LIQEAFQLASETPPQVGIRRTVQAARAVLLTGSELLQNLQALGRAPT--TEDVIAQAPATIRRLFELLGATYVKLGQFVASSPTLFPAEYVKEFQKCLDSTESVPFSQIKRIIEDDLKGDLSTFYSFVDEKPLASASIAQVHAAKLKTGEDVVIKVQKPGVGSLLKADLAFVSFSSKVLEFLNPEF-KRLSLADIAADIR 280
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A812MLX9_SYMPI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812MLX9_SYMPI)

HSP 1 Score: 178 bits (452), Expect = 1.700e-51
Identity = 95/205 (46.34%), Postives = 135/205 (65.85%), Query Frame = 1 
Query:    1 EDGRDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            ED    L    +V   TG   G  R  QAA+A A TA +VA      + +   A          VLRKL ER+G+TY+K+GQF+ASSPT+FPA YVKEFQ+CLD T ++ +  ++ IIE++LG+ +  V++ ++  PLASASIAQV+  RL+ G +VV+KVQKPG+ EVLKTDLG +Y+ ++++E +NP    R S++DI  D+R
Sbjct:   27 EDAMKLLKEVAEVAASTGPEVGLRRGLQAAQAAAATAAEVAQKPPAELDEAFVA---------KVLRKLFERLGSTYVKLGQFIASSPTVFPAPYVKEFQRCLDSTSTVSFVEVKRIIERELGQPLRNVFAYVDPTPLASASIAQVHTGRLRDGSEVVVKVQKPGIEEVLKTDLGVVYLAARILEFINPDLNIRGSLADIASDLR 222
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: A0A7S3P745_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P745_9STRA)

HSP 1 Score: 182 bits (463), Expect = 2.330e-51
Identity = 99/205 (48.29%), Postives = 140/205 (68.29%), Query Frame = 1 
Query:    1 EDGRDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            ++ R  +   V  + + G R G  R+ QA RA   TA +    ++ G     GA++T     P +LR L ER+GATYIK+GQF+ASSPTLFP  YVKEFQKCLDQT+ +PWST+R +IE +LG  +++ +  ++  PLASASIAQV+  RLKTGED+VIKVQKPG+ E LK DL F+++ ++++E + P +  R S+S + GD+R
Sbjct:   78 DEARSLIRDIVTSVAEAGPRAGPQRTFQAYRAFDKTAREFLPQIVTG-----GAIDT-----PVILRTLFERLGATYIKLGQFIASSPTLFPKEYVKEFQKCLDQTEPLPWSTIRRVIEDELGP-ISQTFEYVDQKPLASASIAQVHCGRLKTGEDIVIKVQKPGIDECLKADLSFLFVAARVLEFLQPDW-ERTSLSAVAGDLR 270
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BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Match: B7G1Y2_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1Y2_PHATC)

HSP 1 Score: 181 bits (458), Expect = 7.920e-51
Identity = 105/202 (51.98%), Postives = 139/202 (68.81%), Query Frame = 1 
Query:   10 RDFLSMAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETLRSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDSIPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVVIKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR 615
            +D L  AVD     G R G  R+ QA RA ATTA +    +  G        ET+  SP +VLR L ERMGATYIK+GQF+ASSPT+FP  YV EFQKCLDQT+S+PW  ++ +IE +LG  +++ +  +N+ PLASASIAQV+ ARL+TGEDVV+KVQKP + E LK DLGF+Y+ ++++E   P +  R S++ I GDIR
Sbjct:   70 KDVLRAAVDA----GPRAGPARTMQAYRAFATTAQEFLPKLAQGP-------ETI--SPAAVLRTLFERMGATYIKLGQFIASSPTIFPKEYVLEFQKCLDQTESLPWPIIKKVIEDELGP-ISKNFQYVNSKPLASASIAQVHVARLRTGEDVVLKVQKPRIDESLKADLGFIYVAARILEFFLPDW-ERTSLAAIAGDIR 256
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11116.2326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFG3_ECTSI3.100e-12289.76Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KMH0_9PHAE5.480e-11989.71ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2F4J6_9DINO2.580e-5560.28Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S4RD62_9DINO3.250e-5449.51Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A6T5M278_HETAK8.500e-5450.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0AMY5_9DINO4.280e-5350.00Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A7S4N0D6_GUITH2.250e-5251.50Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A812MLX9_SYMPI1.700e-5146.34Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S3P745_9STRA2.330e-5148.29Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
B7G1Y2_PHATC7.920e-5151.98Predicted protein (Fragment) n=3 Tax=Phaeodactylum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11116contigM-pyrifera_M_contig11116:816..9474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.6
Seed ortholog evalue1.9e-93
Seed eggNOG ortholog2880.D8LFG3
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0010287,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Exons6
Model size618
Cds size594
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815623.1796706-CDS-M-pyrifera_M_contig11116:815..8781622815623.1796706-CDS-M-pyrifera_M_contig11116:815..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 816..878 -
1692277492.3523166-CDS-M-pyrifera_M_contig11116:815..8781692277492.3523166-CDS-M-pyrifera_M_contig11116:815..878Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 816..878 -
1622815623.1930318-CDS-M-pyrifera_M_contig11116:1740..18601622815623.1930318-CDS-M-pyrifera_M_contig11116:1740..1860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 1741..1860 -
1692277492.3619034-CDS-M-pyrifera_M_contig11116:1740..18601692277492.3619034-CDS-M-pyrifera_M_contig11116:1740..1860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 1741..1860 -
1622815623.2081683-CDS-M-pyrifera_M_contig11116:4869..49701622815623.2081683-CDS-M-pyrifera_M_contig11116:4869..4970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 4870..4970 -
1692277492.3730402-CDS-M-pyrifera_M_contig11116:4869..49701692277492.3730402-CDS-M-pyrifera_M_contig11116:4869..4970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 4870..4970 -
1622815623.22164-CDS-M-pyrifera_M_contig11116:5747..58441622815623.22164-CDS-M-pyrifera_M_contig11116:5747..5844Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 5748..5844 -
1692277492.3813105-CDS-M-pyrifera_M_contig11116:5747..58441692277492.3813105-CDS-M-pyrifera_M_contig11116:5747..5844Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 5748..5844 -
1622815623.239565-CDS-M-pyrifera_M_contig11116:7965..81101622815623.239565-CDS-M-pyrifera_M_contig11116:7965..8110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 7966..8110 -
1692277492.3900044-CDS-M-pyrifera_M_contig11116:7965..81101692277492.3900044-CDS-M-pyrifera_M_contig11116:7965..8110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 7966..8110 -
1622815623.2547836-CDS-M-pyrifera_M_contig11116:9382..94501622815623.2547836-CDS-M-pyrifera_M_contig11116:9382..9450Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 9383..9450 -
1692277492.3991106-CDS-M-pyrifera_M_contig11116:9382..94501692277492.3991106-CDS-M-pyrifera_M_contig11116:9382..9450Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11116 9383..9450 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815623.264571-UTR-M-pyrifera_M_contig11116:9450..94741622815623.264571-UTR-M-pyrifera_M_contig11116:9450..9474Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11116 9451..9474 -
1692277492.4079087-UTR-M-pyrifera_M_contig11116:9450..94741692277492.4079087-UTR-M-pyrifera_M_contig11116:9450..9474Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig11116 9451..9474 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11116.2326.1prot_M-pyrifera_M_contig11116.2326.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11116 816..9450 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11116.2326.1

>prot_M-pyrifera_M_contig11116.2326.1 ID=prot_M-pyrifera_M_contig11116.2326.1|Name=mRNA_M-pyrifera_M_contig11116.2326.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
MAVDVITDTGVRTGAIRSTQAARATATTAFDVALNVLGGVRDGTGAVETL
RSSPPSVLRKLCERMGATYIKVGQFVASSPTLFPANYVKEFQKCLDQTDS
IPWSTMRPIIEKDLGKRVTEVYSSINTVPLASASIAQVYEARLKTGEDVV
IKVQKPGVAEVLKTDLGFMYITSKLVELVNPMFASRLSVSDIVGDIR*
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mRNA from alignment at M-pyrifera_M_contig11116:816..9474-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11116.2326.1 ID=mRNA_M-pyrifera_M_contig11116.2326.1|Name=mRNA_M-pyrifera_M_contig11116.2326.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8659bp|location=Sequence derived from alignment at M-pyrifera_M_contig11116:816..9474- (Macrocystis pyrifera P11B4 male)
GAAGACGGCAGGGACTTCTTGTCGATGGCCGTGGACGTCATCACCGACAC
GGGCGTGAGAACGGGCGCGATTCGATCTACGCAAGCAGCCAGGTGCGCAG
TTTCAGTGCGAAAGGGGTGTGCAAGGTGCGGGGGGGAAGGAGGGGGGCGT
ACTCATTTGTTGCTTGCCTTAGTAATTTGACCAGTGACCGCGCATCCCTT
TCGGGGGGGGGGGTACTCGTTGTCACGCATGGCCATAGTCGTATGATCAT
AGACCCTCGCATCCCTGCAGTGCCGGGACAGGGCGCGTCGGGCTTTTAGC
GGCCAGGCAGACACTTGTTTGCACCAAGCGCGAATCGCCCTCGCGTGTTC
GGCGCCCCGCATCAAGGGTGAGCTGCATCATTGAGGCGGGCCTCGGCACC
TTGTGCGTACTTTCTTGATTATGGATGACAGCGTCGAATGACGTGATTGC
GGGGGGCAGTTTCACCCTTCGCATCCATCCCTCTCATGTTTTTCGCCCAT
CATGTCAATAATATTGCGAGGCGCGCCTGTAACTTCTGCAGGAGCTGGAG
CTACTGCGTAAGTCTACAGTAGTCCACTGGTACAACTTATCATTTTTACG
TGCCTGCACACTACACTTGGGTATAGTAGTCCAGAGCTGCACCGTAGAGG
TAGAACCTAGACATCCCTATTGTAACCCTCAACCATGCGCGTTTGGGCTC
TCCGGCAGTTTCCCGGGCACCTCTTCTGGGCGAGTAGTCGCACCTACCCC
TAACCAAAGCCCTAACTCTGACTCTAAGTGTACCGATAACCCTAACCATG
ACCCTATATACCCGCACCTTGACCGTCGCATGTTGCCTCCTACTTGAAAT
GAACACCCCACAACGGCAGAAGCAAACGCTTTCTTTTTTTGTCCGTGAGA
GCGCCTCGCTTGCTTGCCTTGCCGAGTGAAGGATTCCAGTTTCAATTTCG
GTTCCGATGTACTCCCTCTCCCCTCCCGAAAGTCCGTCTCGCTAGCAGTT
CTTACTATTAATATCAGTAGGATATAGTTATAACCCTTCGTGCGACTCGG
GGAACACCTCACGGCGCTTCGCGCTTGGTGCAAGCAATGTCTGCCTGGTA
GGTGAAAACCCGACGTGCTCCGTCCCGGTATTGTAGGGATGCAAGGGTCT
ATGGTCATACGACTACGGCCACGCATGATTATGGTCGGTGAAAACCCGAC
GTGCTCCGTCCCGGCATTGTAGGGGTGCGAGAGTCTATGGTCATACGACT
ACGACCATGCATGATAGTGAGTAACCCCCTCCCCCCCAAAGCGCACGCAG
CTCACACGACCTGGCCTATCCTGACTACATGGTGCACACGTTTCCACGGT
GCCGCCCCCGACAGGGCGACAGCGACGACCGCGTTCGACGTGGCCCTGAA
CGTGCTCGGGGGGGTGCGAGATGGCACGGGAGCGGTGGAAACGCTTCGGA
GTAGCCCGCCGTCCGTGCTGCGGAAGCTGTGCGAGAGGATGGGCGCCACG
TACATCAAGGTACAGCAGCGCAACTTTCTTTTTTTTTTCATTTATGACGC
GTTCTACGATGGAGGTAGCACATTTCCGCTGTAATGTTTTCTGAATGACG
GGGTTCCTTAACCCAAAATCGTCGGAATGCCAATCTTGATTCGAAAAATG
ACGTCTTTGTATGCTTGGATCGTGGGATTATTCGTCTGGATTCAATTTGA
TTTTTTTCTGAGGTCAGTTTTCGGGTGAGGTATGGAGCTCCTTAAGGTCA
AGTGAGGAGCTTCAGAAAAATTAGGGAGAACGTCTATCGTAGAACGCCTC
TTATACGAAATATGCCGAAAGCGAAGCGAGTCGCTATTTTTTTCTTCACT
TCCGATTTTGTTTTCTCGCCGTCCCCGAACACGAACAATGAACCATAAAT
AATTAATTACATCCCCTAAAATAGCAAGATTAGTGTACAGGGCATACCCT
ACTTTTTCGTTGGGTACCGCCGGATATCCTACGATGTAGAAAGTGTGGAG
CCGGAGATCCCATGCCGTCCGATCGAAATATCTCATAAAAGGGGAAAAAT
CTCCGAAAAAAAAATATTCCCTTTCCACCAACTCACACAGTTGACGACAG
TTACAAATACGAGCCAGCGCGGGTTCCTATTTAGTCGTGGGGCCATAGCT
ATCAGAACCCACGATAACCCCAAAAGGCGTGTATCCCCCTATATGTTTAC
GCCCCACTTTTGGTTCTGACTACTTAGGGTCGTTTCAAACGACCGAATGA
CAAAGCAAAAAACTTGCTATTTTACCGATTCAAAAATTCCCAAAAGTTCC
CCAAACCTCATGTCGTGATACGCTGCATATGTGGCAATGTTTGTCAAATG
TTTGCATCATAACGCCCTCAGATTTTATTCAAACCCCTTACAGCAGCAGC
AGCAGCAGCAGCAGGTAGCCGACGGCACGCCGACGCTCTCTATGGAGTAA
ATGCTACCGCAGAAAGGACTCCAGGCACAGTCCATGTACCTTAGAGGTCG
GCAGTCCTTCCAGCCCGGCCAAAACTGGGAAAAGCTGGAACGGCCGCTGT
TTGTGATAATGTTTTAGCCCCCGCACGAAACGACACCCATGTCGCATTCA
CACGGGGCTCACGGCTATTAATAGTGTCGCCAGCCCTATCATCGTTGCTG
TCAATGCCACCGTGTATCCTCCGTATCTCCCTGTCTTTCACATGTCTAGC
GTGGGGCGTCGTGAGGTGATCTGGTTGTACAACCTTGCGTTGGCGGTATT
GGGCTAGAATAGTAAATAAGATAGCCAATATCACTTTGCATAAACTTTCC
AACGAAGCAAAACGGACACATCCGAAAAAAACTTTGGCAAGTTTTTTTTC
TATTTCGGCAAGTCCTAATTTCCATGAGCTTGCTATTTTGGCAAAAACTA
GCCATATATGTGTTGTTAGAAATGACCCCTACTGTATGTTCCCCCTAAAT
AGTAGCTACAGCTCGTGCTCTATATTTCGGTAGCACGTTGACATCGTGGC
TCTGGCGTATAAACTGTAGATGCACGCGGGCCGACGAGTTTGAATGAAAG
CACGCTGCCACCGCGTGACATTGTTGGGGTCACCGGCGAAAGTTGTCTCG
AGACCGCATACTGCTGCGTGACCCCCTTTGACGTGTTAAGACGCTCGCGT
GGTCTGCGGTTTCGCGCTCAGCGTTAGCATTGTCGTTGGTGCGCTTCCCC
CGCCGTGACCAAGTGTCCGGGGGTGTGGGGTGGGGGTTCGGGCTTCATCC
GCACAGTGGGCTGCGTCGCGCAGCGTGCAATATACAGGGTGTGACACATC
GCATGCTCTTTGGGTCGATGGGCTCTGTGAGCCGCCGGGGTTTCGTTCGT
GTTTCTTTTCGTACTGCATAGTTCTGTTTTGTCTTTCGGCCTCACGCACC
TCAGCAATGCCGGGCTCTTGTCGACCCAAAAGTGAAACTCGTAGAGCGTG
GACGTTTTTGGCCTTACTGTATTGTATTTTGTCAAGTCTTGTTTTTCGGT
CCGCACTCCCTGCCCTGAGTCGTCCCCTTTTCTTCCACCCCACTATATTT
TCCATTTTTAGGATTCAATATCGCTCGGCAAACCCCAGATTTCCTCCGTG
ATATTGTTGCCACCGCCTGCCCTCTGTCAGGTAGGGCAGTTCGTGGCCAG
CAGTCCCACCCTCTTCCCTGCCAACTACGTGAAGGAGTTCCAGAAGTGCT
TGGACCAGACCGACAGCATCCCGTGGAGTGAGTGTTATCACTTTCTCCCC
ACTCCAAAAAACGAGCTCAGTCTAAGTTCAAGTACTTCGTTAAAAAAAAT
CGACGGTGCAGTTCTAAAGCTGGGTGCCGTTGCCCTCTTGCTATACGTAG
TACGTATTATTCATACTTGTTGCCATTTTTGCTATTTATTGCTATGATTT
TCCGTCTCTAATCCTGAGGAAGCTATCTCCACAGTTTTGGCGCAGTTTCG
TAAACGAGGTTTGTGTTAGTAGTGGTAGGTGTCCTCGAGTAATTGGCACC
CCCTCAATTTCCCGCTTCGCCTTCTGCTATCAAAAGCTGTCTCTGTGGAA
TCTACCCCGTCGGTCACTAGACGATGCTGATATGTTCGGAATGTATAAGT
TGGCAAGTCCACCCGCTGAGCTGATCGCACGGCCGCCTTTGGCTTCGTCG
TTTTTCCTCTAGCGACATGAGGTTTTTATTTCTCGATTTTTCACTGGGCG
CTGCACACGACAGAGGGCGGCGGGACGAAATGTTATACTTTATCCATGGG
CCACACTAGTACGCCGGCTGTGACCTCAACCTATTTGATCGATACTTACC
TTCGCCAGCGTGCGACATACGTCGATCGCGTTTGTTCCAGGAATGTCGTT
TTCATCGTGGGGGAAAAACGGATTCTTGTGTTGCATTGCGTTGCCTCTCT
TTTTTTCTGACAACTCCACCGCCGCCGAGCTCGAGCACTTTTTCCCACCC
CACGTGTACCCTCCCCCCTCCCCTCTCTCTGCCCGCTGCCGTTGCCTCCT
GCAGGCACGATGAGACCAATCATCGAGAAGGACCTGGGCAAGCGCGTAAC
GGAAGTTTACTCATCCATCAATACCGTCCCGCTGGCCTCGGCCTCCATCG
CGCAGGTGTCACGCGTGCAGTCGTAGATGTCCCTCGAGACAGTTTAAAAA
ACATCATTTTCTGTGCGCCACCGCCGCCGAGTAGCCTTCTCGGGCATCTC
GTTTATGTCTCGTGTATGGTTTACCTGTTCGGTTGTCATCGCCAAAATGT
TCTGAGGTGATGTTTTTTGTGTTCCCTGAAGCCTTCAAAGAAAAAAAAAG
AAACATTTTCATGCCAGGCACCTCTCATGGGTTGATGGGTACTTTATGAG
GCTGTGCCGCCCCTTCGTTTTCCTTCAAAGAGACGTTGCGAGATCGAGGC
TTGAAACAGAGTTTGGGTGAGTTTTGGGCAAGCTTAGCCTCCATCCGATC
CATCGGGGAAAACATGGATAGGCTGATTTTTGCGCTCATTGGGCTGTAGC
TCTCGGCTCTAACCTAAGGTGGCGGTGAAACTCGCGAAGGTTAATTTTAC
CGACATTACTTTTTCTCACGCATGTGTATAAACATACGTATGTTAATCCT
TAGCCTGATCTGATCCGTTTTTGGTCGGCGGATCTCTCCCCCCTCTGACC
GTATTTCCGCGCGGTTTCTTCGCCGGGGTGTGCCCCCTCCACGCCTGAAA
CGCCCGGCGTCGGAGGATCCGCCCGCTCAGCGCCGTTGCGCCTGCGGGAG
GCCTTGACGTTGAGCTCTACGAAGGAATCTCCGAAAATCCCTGCTCTGTC
AGTGTTTTGGCCCATGGTCTCTCGACAGGGTGTATGCATTCGCGTGGTTC
TTTCCGGCACGTCCTTTCCGACGTCGGACCCATGGGGGAGGGTCAGCTAC
CGGGCAAGCGTTGTCATTGTGGGGGCCTGCGCGGTGGCTGTATCTGGGAC
ATCGATGGAACGTCCCGGTAGCACATGCCACCCACGCTTGGTTGAGAACT
GCCATCAGTAAAAAAATATGCTCTGTATGAGAGAGATACCGCATGCCAGC
TACAGCCAGCAGCACTTATGACGGCCAGCAGCATTTTTCGGTGTGTACGC
TATGGTACAGCGGCAGCTGCAGCGGAGCTGTATCACGTGGCTGCGGAAGT
GTACAGCTACGGCAGTACTGCTACAGCAGCTGCTGTGACCGCCCCTTTCT
ACGGAGCTGCGCTGTCGGTTATCGCGTACTCCCTGAGTTAGGAGTTAGTT
ACACCGCCTTCTAGCATTCCGCCGCTTTTCGGTTAATCGGCAAGTACTCG
TCAGTATTCTGCCGCCTTCTCCAACGTCCATCATGGAGTGTGGAGCGGGC
GCTCTCAATCTCTTAGTATCGAGTCTCAGCCTCCCCCTCTACATTATACG
TCCGTCACGCAAGTCTGCGACGGCCGCCGGCGTAGCCCCTTGTATTTATA
TACAACCTAATATAGGTAAAAAACGTCAGCTGTGAGAATGAGGAGTTCGG
CGAAAATGATACTTGGAAAGCTGTGTTTGCGTGTGATATTTCGATAAGAA
CTTGAATCGCAGAACTCCTGTCATACCGGTACCGCTTACTCGGTGTCCAG
CCGATCGAAAGATCACAGCAATCATATACTTGTAGACGTACATGTCTCGG
GTTCCGCCAGGATGTCGTTCGCTGGCACAACGCATATGGTTTCACATGAG
TAAAAGTTGCTCGCTTCACCTACTGTAGGGGAAAATACGGCACGCGGACG
TACAGAGAGGGGCGTGGGGCACACGCAGAGAAGTACCGCGGTCGGTTTCT
GGCGGGTTCTGGCTGCTCCTGTCTCGAGAACGAGGCCGAGAACAGGCACG
TAGCGCCTTGCCCTTGAACCGAGTTGACGATAGGGGTTGCACTTGCGAGT
CCAAACATTTCACACGTTGGACATATCAGATAGATCGTCGATTCGATTCG
CGCTTAATGATCCAGGTCTTGCGGGGTAGACATAGTTCCGATCTGCATGA
TCTAGCTCATGTTGCCAGGTGGGAGTCGTATGATCTGAATGATCTAGAAC
ATGTTTCCTGGGCTGGACCTGTACTGTATACAGATACTGCACAGCATCTC
ATAAGGGCAGGTTAGGATCTATATGTAGATGATCTATCGGTAGAGGATCT
ATCGGTAGATGATCTATCGGTAGATGATCTATCTGTAGATTTTCTATCTG
TACATGATCTATCTGTATATGATCTATCTGTAGATGGTCTATCTGTACAT
GGTCTATCTGTCCGAGGTGTGAGCTCCGTAGCTGATGAGTATCCCAATGG
CACTGTATTTTAATTCCATAGAAACAATCTTGCAGATGTCTCGCCTATTT
CGGAGGACACCCTCGGTATATTCTCCCACCTCTCAGCCGTTCTCAGCCCT
TACTTGTCGACCAAAAAGTTTCTTTTCTGGATCTATTCTCGAGTTCTCTT
ACACGTGTGCCGATCTGGAAATGTGTGTTTTTATTTATCGTACGTAGAGT
TTCTCATTCTTTCCTCTTCTCCTTTTGTTTTGTTGTTCCGCGTTGAACCT
CGTATTGGCCCGGCATAGCTTTTCTTGCACCACTGACTCTCTTGGCACTT
GCAAGCCTCCCATTGCACCAAGTCGCGAGCGTCCTCTGCCCTCTGTCTGC
TCTACACTGTGTTCTGTCTGCTTCCTTGAGCGAGCGCAGCAGGCGGCGTA
TAGCCGCCTGCGGAGCACAGCCTTGTGTATAATTCACTATAACTCGACAG
ATAAGTACCTCAAGTCCATGGAATTGTGTATCGAGCTTGACTTGCACGAT
TTTTTCTCTGAGCCAATTATTTCTGGTGGGTTTAGGTAACATTTTTTTTT
TCTCTCATTACTGTCAGTTGTTTTTGGGCGAGGTGGATAGAACCTCCTCA
AAGCGAGGAGCACCGTACCTGTGGTGTATTTTTAGCTGCGACTACCCCTA
TATGTACCGTGGCTCGCGCCCCCCTCGCCGTCGCCGTTTCGCTCGGAGAC
AGCTTGAGAGTCAGCACCCCTCGGCGGCGTATGGCATGACCCCTTTCGCG
ATCAGCATCTGAGAGTTCTCACGAAAAAGGCGATGTATCGCCTCCCGCTA
TGTGTCATATGTAGGTGTACGAGGCTCGGCTGAAAACGGGCGAGGACGTG
GTGATCAAGGTGCAGAAGCCCGGCGTGGCCGAGGTGCTGAAGACCGACCT
CGGCTTCATGTACATCACGTCTAAGCTCGTCGAGGTGAAAGGGCTGTTTT
TTTTTGGGTCGCCTCTTCGAACGAACTCTTTCAAGCTGTGAAACATCCGA
CAGACCACTGCTGTAGTGCTGTTGAGCGTCAGTGTATATTAAACTATGCA
CTCAGTAGTAGTAGTAGTACCTGCAGCAGTGGTAGTCATGCATTATTAGT
AGCAGTAGCAGTAGTAGCAGCAATGTTCGTGTATTAATAGTAGTAGCAGC
AGTAGCAGAAGAAGCGGTAGCAGTAGCGGCAGCAGTAGTAGTAGCAGCAG
TATTCATATATTCACAGTATCAGTAGTAGCAGCAGCAGTAGTAGTAGCAG
TAGCAGTAGCAGTAGTTAGTATTACGGGGGTCCATAGCTAATAGGACCTA
TGGTGTACATAAAAACCTATATGTTTACCTATTTTTAGTAACAAAATTTG
GTCCCATAAACTATGGACCCCCGTAATGGTAGTAGCAGTAGCAGTAGCAG
GAGTATTATTATAGTAGTAGTACCTGCTTGGTTTTGGAGGGGGGAAGTCG
CCCTGTCGTGAACGATCGGACACACCCCTTCGAGGCCTGAGAGAAAACTG
GATTCTAACACGCAAAAGTTCCGAATGGTTTGCATCCCGTTCACGCAGAG
TTTGTCGTTATTAAAAGTAGCAGATACCGCTGGAGTCCTTATTGCAGAAT
AACGAAAGGCGCGATTTACGCTCTTACCGCGTGTTTTGCGCTTCCTGCAC
AACCGGCAGCCCTTCTTCTACCTTCGCGCGCCTCAGCAACGCTTGGCGAG
ATGTCGATTGACACCATCACCGACCCCCCCCCCCCGCGCCCCGGGCGCTC
TGCGCCGCCCGCTTGTCCCCTTATTGCGTCGCACCGCACCGTGCAGCTGG
TGAACCCTATGTTTGCAAGCCGTCTCAGCGTGTCAGATATCGTCGGCGAC
ATCAGGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11116:816..9474-

>mRNA_M-pyrifera_M_contig11116.2326.1 ID=mRNA_M-pyrifera_M_contig11116.2326.1|Name=mRNA_M-pyrifera_M_contig11116.2326.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig11116:816..9474- (Macrocystis pyrifera P11B4 male)
ATGGCCGTGGACGTCATCACCGACACGGGCGTGAGAACGGGCGCGATTCG
ATCTACGCAAGCAGCCAGATGGCCGTGGACGTCATCACCGACACGGGCGT
GAGAACGGGCGCGATTCGATCTACGCAAGCAGCCAGGGCGACAGCGACGA
CCGCGTTCGACGTGGCCCTGAACGTGCTCGGGGGGGTGCGAGATGGCACG
GGAGCGGTGGAAACGCTTCGGAGTAGCCCGCCGTCCGTGCTGCGGAAGCT
GTGCGAGAGGATGGGCGCCACGTACATCAAGGGCGACAGCGACGACCGCG
TTCGACGTGGCCCTGAACGTGCTCGGGGGGGTGCGAGATGGCACGGGAGC
GGTGGAAACGCTTCGGAGTAGCCCGCCGTCCGTGCTGCGGAAGCTGTGCG
AGAGGATGGGCGCCACGTACATCAAGGTAGGGCAGTTCGTGGCCAGCAGT
CCCACCCTCTTCCCTGCCAACTACGTGAAGGAGTTCCAGAAGTGCTTGGA
CCAGACCGACAGCATCCCGTGGAGTAGGGCAGTTCGTGGCCAGCAGTCCC
ACCCTCTTCCCTGCCAACTACGTGAAGGAGTTCCAGAAGTGCTTGGACCA
GACCGACAGCATCCCGTGGAGCACGATGAGACCAATCATCGAGAAGGACC
TGGGCAAGCGCGTAACGGAAGTTTACTCATCCATCAATACCGTCCCGCTG
GCCTCGGCCTCCATCGCGCAGGCACGATGAGACCAATCATCGAGAAGGAC
CTGGGCAAGCGCGTAACGGAAGTTTACTCATCCATCAATACCGTCCCGCT
GGCCTCGGCCTCCATCGCGCAGGTGTACGAGGCTCGGCTGAAAACGGGCG
AGGACGTGGTGATCAAGGTGCAGAAGCCCGGCGTGGCCGAGGTGCTGAAG
ACCGACCTCGGCTTCATGTACATCACGTCTAAGCTCGTCGAGGTGTACGA
GGCTCGGCTGAAAACGGGCGAGGACGTGGTGATCAAGGTGCAGAAGCCCG
GCGTGGCCGAGGTGCTGAAGACCGACCTCGGCTTCATGTACATCACGTCT
AAGCTCGTCGAGCTGGTGAACCCTATGTTTGCAAGCCGTCTCAGCGTGTC
AGATATCGTCGGCGACATCAGGTGACTGGTGAACCCTATGTTTGCAAGCC
GTCTCAGCGTGTCAGATATCGTCGGCGACATCAGGTGA
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