mRNA_M-pyrifera_M_contig111103.2322.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A2E7KH02_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KH02_9PLAN) HSP 1 Score: 385 bits (988), Expect = 1.240e-133 Identity = 193/197 (97.97%), Postives = 195/197 (98.98%), Query Frame = 1
Query: 1 QPTLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
QPTLDDVLQ+QRE VL QGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIA+LTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW
Sbjct: 45 QPTLDDVLQNQRESVLEQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIAALTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 241
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A812PJG9_SYMMI (SigL protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PJG9_SYMMI) HSP 1 Score: 375 bits (963), Expect = 5.490e-119 Identity = 189/197 (95.94%), Postives = 190/197 (96.45%), Query Frame = 1
Query: 1 QPTLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
QPTLDDVL DQRE VL QGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERI +LTDETEVSRGQDWLKQQI EPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLI APHPQLSQ DRTW
Sbjct: 223 QPTLDDVLLDQRESVLEQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERITALTDETEVSRGQDWLKQQIAEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLINAPHPQLSQVDRTW 419
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A3D3R7V3_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3R7V3_9PLAN) HSP 1 Score: 338 bits (867), Expect = 3.230e-115 Identity = 168/197 (85.28%), Postives = 179/197 (90.86%), Query Frame = 1
Query: 1 QPTLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
Q TL+DVLQDQRE VL QGCQ LS LQIQQLLTHP+LLLELQEQLFLEGG FWQ+RI +LTDE EVSRGQDWLK QI PPA E Q+ +T PA QT+SYRKIGIIGFVSAAL+LVA+FLNQ+PAAPQGWGWNRPGALTADVP AEYLNQLADSAEEWFNKPTETKAAL+TRLKQFRAGCETLIKAPHPQLSQDDR W
Sbjct: 45 QLTLNDVLQDQRESVLEQGCQGLSSLQIQQLLTHPKLLLELQEQLFLEGGTFWQKRITALTDEAEVSRGQDWLKPQIAGPPAAETQSTSTPPALQTISYRKIGIIGFVSAALILVAVFLNQQPAAPQGWGWNRPGALTADVPPAEYLNQLADSAEEWFNKPTETKAALDTRLKQFRAGCETLIKAPHPQLSQDDRIW 241
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A3D3R959_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3R959_9PLAN) HSP 1 Score: 229 bits (584), Expect = 2.980e-72 Identity = 117/195 (60.00%), Postives = 144/195 (73.85%), Query Frame = 1
Query: 7 TLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
TL V DQ E +L G L+ Q+QQLLTHP LLLELQE L LEG FWQ+ S +++E++ + L++Q+ PP E + V ++ SYRKI ++GFVSAAL+ VA+FLNQ+P+AP GWGWNRPGALTAD+PA +YLN+LADSA EWF KPTETKA+L TRL QFRAGCETLI APHPQLS +DR W
Sbjct: 47 TLGTVCGDQWENILQDGFSELTQTQLQQLLTHPYLLLELQELLLLEGSDFWQKHFLSQNNDSEITDNKLALQEQLFSPPP-EPETVQQPVDYKKSSYRKIAVLGFVSAALICVAVFLNQQPSAPAGWGWNRPGALTADIPANQYLNRLADSANEWFKKPTETKASLITRLTQFRAGCETLINAPHPQLSPEDRVW 240
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A3D4PAB6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D4PAB6_9PLAN) HSP 1 Score: 135 bits (341), Expect = 1.050e-35 Identity = 87/201 (43.28%), Postives = 114/201 (56.72%), Query Frame = 1
Query: 10 LDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTV-------SYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
L DVLQ+Q + V G VLSP+QI+QLLT P LL ELQEQ+ L+GG +W + S T + E+ D KQ TE Q T P Q S++ + + G LV + N +P A WG+ + G L+AD+ A YL+ LAD+A +WFNK E+ L TRL+QF GC+TLI APHPQLS+ D W
Sbjct: 48 LPDVLQEQEQQVYESGLHVLSPIQIKQLLTAPHLLFELQEQILLQGGEYWSQLSLS-TSQRELL--DDQRKQLATEIAGD--QTAITPPVSQPTRHSSKWSSWKTLIVPGVALLVLVGIVTVWN-KPVASGSWGFQQGGLLSADLNARAYLDSLADAAGQWFNKRPESAENLVTRLQQFSDGCQTLITAPHPQLSETDIDW 242
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A517TTM0_9BACT (Uncharacterized protein n=1 Tax=Lacipirellula limnantheis TaxID=2528024 RepID=A0A517TTM0_9BACT) HSP 1 Score: 113 bits (282), Expect = 5.430e-27 Identity = 71/199 (35.68%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 7 TLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIG--IIGFVSAALVLV--ALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
+LD + D+ VL G LS ++ LL P LLLELQ ++F EGG +W+ S V R + + +++ E P T P + V + ++ ++A L+L A L P GWG++RPG LT +PA +YL L+ +A +WFNK ++ +L RL QFR GC+TL+ APH QL+ D+ W
Sbjct: 49 SLDVAIGDRLATVLEAGLCGLSVDDLRGLLARPGLLLELQARIFGEGGDYWRGVAISSEHRAAVQRVESAVSERLRERP-------TLPPVAEPVGNLRARWRVLPAIAAVLLLALGAWALRPGPVPAPGWGFDRPGLLTQQIPADQYLTMLSQAANQWFNKKPDSADSLRARLIQFRDGCDTLLAAPHAQLAAADKEW 240
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A5C5ZZC4_9BACT (Uncharacterized protein n=1 Tax=Stieleria varia TaxID=2528005 RepID=A0A5C5ZZC4_9BACT) HSP 1 Score: 110 bits (276), Expect = 4.800e-26 Identity = 69/211 (32.70%), Postives = 108/211 (51.18%), Query Frame = 1
Query: 10 LDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQ----------------ERIASLTDETEVS-RGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFLNQEPAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
LD ++ D+R +LA+G LS Q++ L+ HP+LL+ELQE + +EGGA W + I L D T+ G + L+Q + + V P ++ +A L+ V + P GWG++ L+A V +Y+ LAD+A++W+NK +T AL RL+Q+ GC+ L++APH QL+Q DR W
Sbjct: 49 LDQLIGDRRSELLARGTIALSETQLRTLIRHPDLLIELQELVLIEGGAHWLNLSADASHADEARGQWQSIRLLADATQTKVDGSEHLQQGVHRDTPRDGSTVPWMP-----------LLAVAAALLLAVGWWFGIRETGP-GWGFDNQELLSAKVQPQQYMTLLADAADDWYNKRPDTSEALAKRLEQYSQGCQILLEAPHEQLAQADREW 247
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: UPI00035F206F (hypothetical protein n=1 Tax=Zavarzinella formosa TaxID=360055 RepID=UPI00035F206F) HSP 1 Score: 103 bits (257), Expect = 2.510e-23 Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = 1
Query: 55 GCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETE-VSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIG--FVSAALVLVALFLNQE--------PAAPQGWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
G + L +++LL P LLEL + L + GGA+W ++ ++ D T+ V+ G + LKQ + PP ++ PA ++ + K + G F +AA +L+A+F+ + P WGW +P A EYLN+LADSA EWF K E KAAL R+ +FR GC L+ A H L D+ W
Sbjct: 60 GLKTLPAHLLRRLLIRPGDLLELAKYLLMNGGAYWDAKLNAVPDMTDDVAAGWERLKQAL--PPVESVK-----PAGKS-GFGKWVMAGSVFATAAAILIAVFVLKPFGDKSQTGPEVAAAWGWQKPDAFAPAPTREEYLNRLADSANEWFKKRPEDKAALAKRIGEFRQGCTALLTASHEPLPPADQAW 241
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A356A9A8_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356A9A8_9PLAN) HSP 1 Score: 101 bits (252), Expect = 2.120e-22 Identity = 72/225 (32.00%), Postives = 110/225 (48.89%), Query Frame = 1
Query: 7 TLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQIT-----EPPATEMQNVTTAPAFQT----VSYRKIGIIGFVSAAL-VLVALFLNQEPAAPQ--------------------GWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
+L ++L R+ VL +G + L+ Q L +P++LLELQE + +EGG +WQE L D+ E+ ++ T P +Q + +P +S +G++ V+ V V+ LN P WGW+ P A +PA +YL++LAD+A WFNK ++ L+ RL +FR GCETL+ A H LS+DDR W
Sbjct: 51 SLKEILGSDRDAVLDRGLKSLNYDQCAAFLANPQMLLELQELVLIEGGKYWQE----LFDQAEIPTASPPRHKKKTVASNSAPKVHVLQPIEESPKRSKMPWIISMAALGLLAIVAYQYQVHVSNPLNSIVENPNDKKSDSNPDNNSPTPTMLASNWGWDSPDAFDNSLPADDYLHELADAAGAWFNKRPDSTDDLKQRLAEFRHGCETLLTAKHTALSEDDREW 271
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Match: A0A5C5XEJ7_9PLAN (Uncharacterized protein n=1 Tax=Rubinisphaera italica TaxID=2527969 RepID=A0A5C5XEJ7_9PLAN) HSP 1 Score: 100 bits (248), Expect = 8.010e-22 Identity = 70/226 (30.97%), Postives = 110/226 (48.67%), Query Frame = 1
Query: 7 TLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGAFWQERIASLTDETEVSRGQDWLKQQITEPPATEMQNVTTAPAFQTVSYRKIGIIGFVSAALVLVALFL----------------------------NQEPAAPQ---GWGWNRPGALTADVPAAEYLNQLADSAEEWFNKPTETKAALETRLKQFRAGCETLIKAPHPQLSQDDRTW 591
+L+ +L RE VL +G + L+ Q L +P++LLELQE + +EGG +WQ ++ ++ E+ +++ T+ + + P ++ K+ I V AAL L+A+ N PA WGW+ P A +P +YL++LAD+A WFNK ++ L+ RL +FR GCETL+ A H LS+DDR W
Sbjct: 51 SLEVILGSDREAVLDRGLKSLNYEQCAAFLANPQMLLELQELVLIEGGNYWQ----NILEQAELPLSSPPRQKKTKSDSGTKPKVLVLQPIEESPKRSKMPWIISV-AALGLLAIVAYQYQVHVSNPVNSIVENPNDKKSDSNPDNNSPAQTMLASNWGWDSPDAFDNSLPPDDYLHELADAAGAWFNKRPDSTEGLKQRLAEFRHGCETLLTAKHTALSEDDREW 271 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111103.2322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig111103.2322.1 >prot_M-pyrifera_M_contig111103.2322.1 ID=prot_M-pyrifera_M_contig111103.2322.1|Name=mRNA_M-pyrifera_M_contig111103.2322.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp QPTLDDVLQDQREPVLAQGCQVLSPLQIQQLLTHPELLLELQEQLFLEGGback to top mRNA from alignment at M-pyrifera_M_contig111103:2..592+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig111103.2322.1 ID=mRNA_M-pyrifera_M_contig111103.2322.1|Name=mRNA_M-pyrifera_M_contig111103.2322.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig111103:2..592+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig111103:2..592+ >mRNA_M-pyrifera_M_contig111103.2322.1 ID=mRNA_M-pyrifera_M_contig111103.2322.1|Name=mRNA_M-pyrifera_M_contig111103.2322.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig111103:2..592+ (Macrocystis pyrifera P11B4 male)back to top |