mRNA_M-pyrifera_M_contig111052.2312.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig111052.2312.1
Unique NamemRNA_M-pyrifera_M_contig111052.2312.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A0A0G4J8H7_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J8H7_PLABS)

HSP 1 Score: 99.4 bits (246), Expect = 1.980e-25
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 1 
Query:    4 HADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            HADA LIAKWK+ GYERLCCLQCIQTRDHN+GTTCICRVP++ L E++ VEC
Sbjct:   82 HADAALIAKWKKQGYERLCCLQCIQTRDHNFGTTCICRVPKESLPEDRTVEC 133
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A0A0L0DG13_THETB (G10 protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DG13_THETB)

HSP 1 Score: 100 bits (250), Expect = 2.020e-25
Identity = 41/53 (77.36%), Postives = 49/53 (92.45%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            G+ADA L+AKWK+AGYE+LCCL CIQTRDHN+GTTCICRVPR QLD +++VEC
Sbjct:   83 GYADALLMAKWKKAGYEKLCCLSCIQTRDHNFGTTCICRVPRAQLDSDRIVEC 135
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A9RQM3_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9RQM3_PHYPA)

HSP 1 Score: 98.6 bits (244), Expect = 4.210e-25
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            GHAD NLIAKWK++GYERLCCL+CIQ RDHN+GTTC+CRVP K L EEKV+EC
Sbjct:   82 GHADKNLIAKWKKSGYERLCCLRCIQPRDHNFGTTCVCRVP-KHLREEKVIEC 133
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: F4PAA0_BATDJ (Uncharacterized protein n=4 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PAA0_BATDJ)

HSP 1 Score: 98.2 bits (243), Expect = 6.130e-25
Identity = 40/53 (75.47%), Postives = 48/53 (90.57%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            GHADA LIAKWK+ GYE+LCCL+CIQ +D N+GTTCICRVP++QLDE KV+EC
Sbjct:   82 GHADAALIAKWKKTGYEKLCCLRCIQPKDTNFGTTCICRVPKQQLDENKVIEC 134
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: BD31B_ORYSJ (Protein BUD31 homolog 2 n=30 Tax=Poaceae TaxID=4479 RepID=BD31B_ORYSJ)

HSP 1 Score: 97.8 bits (242), Expect = 8.460e-25
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            GHAD NLIAKWK+ GYERLCCL+CIQTRDHN+ TTC+CRVP K L EEKV+EC
Sbjct:   82 GHADKNLIAKWKKPGYERLCCLRCIQTRDHNFATTCVCRVP-KHLREEKVIEC 133
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A0A0L0GED7_9EUKA (Protein BUD31 n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GED7_9EUKA)

HSP 1 Score: 97.8 bits (242), Expect = 8.460e-25
Identity = 40/52 (76.92%), Postives = 49/52 (94.23%), Query Frame = 1 
Query:    4 HADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            +ADANLIAKWK++GYE LCCL+CIQTRD N+GT CICRVP+K+L+EEKV+EC
Sbjct:   84 YADANLIAKWKKSGYENLCCLRCIQTRDTNFGTQCICRVPKKKLEEEKVIEC 135
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A0A0A0LSL5_CUCSA (Uncharacterized protein n=7 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LSL5_CUCSA)

HSP 1 Score: 97.8 bits (242), Expect = 8.460e-25
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            G+ADANLIAKWK+ GYERLCCL+CIQ RDHN+GTTC+CRVP K L EEKVVEC
Sbjct:   82 GYADANLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVP-KHLREEKVVEC 133
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BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A0A1U7YXI7_NELNU (protein BUD31 homolog 2-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7YXI7_NELNU)

HSP 1 Score: 97.8 bits (242), Expect = 8.460e-25
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            G+AD NLIAKWK+AGYERLCCL CIQTRDHN+GTTC+CRVP+  L EEKV+EC
Sbjct:   82 GYADRNLIAKWKKAGYERLCCLHCIQTRDHNFGTTCVCRVPQ-HLREEKVIEC 133
[Close]
BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A0A1Y2CAQ7_9FUNG (G10 protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CAQ7_9FUNG)

HSP 1 Score: 97.8 bits (242), Expect = 8.690e-25
Identity = 38/53 (71.70%), Postives = 48/53 (90.57%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            GHAD NLIAKW++ GYE+LCCL+CIQ RD N+GTTC+CRVP+ +LDEEK++EC
Sbjct:   82 GHADENLIAKWRKTGYEKLCCLRCIQPRDTNFGTTCVCRVPKGKLDEEKIIEC 134
[Close]
BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Match: A0A6P3Z7Z4_ZIZJJ (protein BUD31 homolog 2-like n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P3Z7Z4_ZIZJJ)

HSP 1 Score: 97.4 bits (241), Expect = 1.200e-24
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 1 
Query:    1 GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKVVEC 159
            GHAD NLIAKWK++GYERLCCL+C+Q RDHN+GTTC+CRVP K L EEK+VEC
Sbjct:   82 GHADRNLIAKWKKSGYERLCCLRCMQPRDHNFGTTCVCRVP-KHLREEKIVEC 133
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig111052.2312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4J8H7_PLABS1.980e-2578.85Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A0L0DG13_THETB2.020e-2577.36G10 protein n=1 Tax=Thecamonas trahens ATCC 50062 ... [more]
A9RQM3_PHYPA4.210e-2579.25Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
F4PAA0_BATDJ6.130e-2575.47Uncharacterized protein n=4 Tax=Batrachochytrium d... [more]
BD31B_ORYSJ8.460e-2579.25Protein BUD31 homolog 2 n=30 Tax=Poaceae TaxID=447... [more]
A0A0L0GED7_9EUKA8.460e-2576.92Protein BUD31 n=1 Tax=Sphaeroforma arctica JP610 T... [more]
A0A0A0LSL5_CUCSA8.460e-2581.13Uncharacterized protein n=7 Tax=Cucurbitaceae TaxI... [more]
A0A1U7YXI7_NELNU8.460e-2579.25protein BUD31 homolog 2-like n=1 Tax=Nelumbo nucif... [more]
A0A1Y2CAQ7_9FUNG8.690e-2571.70G10 protein n=1 Tax=Rhizoclosmatium globosum TaxID... [more]
A0A6P3Z7Z4_ZIZJJ1.200e-2477.36protein BUD31 homolog 2-like n=1 Tax=Ziziphus juju... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig111052contigM-pyrifera_M_contig111052:7..590 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.1
Seed ortholog evalue3.2e-19
Seed eggNOG ortholog529818.AMSG_06442T0
Preferred nameBUD31
KEGG koko:K01369,ko:K12873,ko:K17285
KEGG Pathwayko03040,ko04142,ko04612,map03040,map04142,map04612
KEGG ModuleM00355
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000278,GO:0000281,GO:0000282,GO:0000375,GO:0000377,GO:0000398,GO:0000910,GO:0003674,GO:0003700,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007049,GO:0007163,GO:0008134,GO:0008150,GO:0008152,GO:0008380,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010604,GO:0010646,GO:0010647,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0022402,GO:0023051,GO:0023056,GO:0030010,GO:0030374,GO:0030532,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032991,GO:0033143,GO:0033145,GO:0034641,GO:0035257,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044093,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051301,GO:0051427,GO:0060255,GO:0060765,GO:0061640,GO:0065007,GO:0065009,GO:0070013,GO:0071007,GO:0071013,GO:0071014,GO:0071704,GO:0080090,GO:0090304,GO:0097525,GO:0120114,GO:0140110,GO:1901360,GO:1902494,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2000273,GO:2000823,GO:2000825,GO:2001141
EggNOG free text desc.Protein BUD31 homolog
EggNOG OGsCOG5132@1,KOG3404@2759
EC3.4.22.34
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko04147
Exons2
Model size159
Cds size159
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815622.3402848-CDS-M-pyrifera_M_contig111052:6..1261622815622.3402848-CDS-M-pyrifera_M_contig111052:6..126Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111052 7..126 -
1692277491.9618273-CDS-M-pyrifera_M_contig111052:6..1261692277491.9618273-CDS-M-pyrifera_M_contig111052:6..126Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111052 7..126 -
1622815622.3537672-CDS-M-pyrifera_M_contig111052:551..5901622815622.3537672-CDS-M-pyrifera_M_contig111052:551..590Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111052 552..590 -
1692277491.9735408-CDS-M-pyrifera_M_contig111052:551..5901692277491.9735408-CDS-M-pyrifera_M_contig111052:551..590Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig111052 552..590 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig111052.2312.1prot_M-pyrifera_M_contig111052.2312.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig111052 7..590 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig111052.2312.1

>prot_M-pyrifera_M_contig111052.2312.1 ID=prot_M-pyrifera_M_contig111052.2312.1|Name=mRNA_M-pyrifera_M_contig111052.2312.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=53bp
GHADANLIAKWKRAGYERLCCLQCIQTRDHNYGTTCICRVPRKQLDEEKV
VEC
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mRNA from alignment at M-pyrifera_M_contig111052:7..590-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig111052.2312.1 ID=mRNA_M-pyrifera_M_contig111052.2312.1|Name=mRNA_M-pyrifera_M_contig111052.2312.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=584bp|location=Sequence derived from alignment at M-pyrifera_M_contig111052:7..590- (Macrocystis pyrifera P11B4 male)
GGCCACGCCGACGCCAACCTCATCGCCAAGTGGAAGCGGGTCCGACCCCC
TCCTCCCTTCTCTCTCTCCATCTCTCTCCATCTCTCTCTCTTTCACACAC
ACACACTCTCTCTCTCTCACTCTCTCTCTCTCATTCTCTCTCAATCTCAC
CCAGGCTGTGCCGCCTCTCAACAGCGACACGCGCGATGCTTCAATTCCCT
TCTCTCTCTTCCACAACACTTCTGCCTCTTTGTCTCTGCCTTCTCAAACT
ATCTTTCTGTCTCCCTTGCAACCCCTCCCTGCTCACCTCTGCTCTTCCCT
CTGCCAGTCTACGTCTCCCTCGATGCCACCACACACATCCACGCACATAC
CATCACACCATCACACCGCCACACCACCACACCATCGCACACACCATCAC
ACCATCGCACACACCATCACACAGTCACACAAACCAGACCCACATTGCAG
GGCTGACGGCGCAGGCTGGCTACGAACGGCTGTGCTGCCTGCAGTGCATC
CAGACGCGCGACCACAACTACGGCACCACGTGCATCTGCCGCGTGCCGCG
CAAGCAGCTCGACGAGGAGAAGGTCGTCGAGTGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig111052:7..590-

>mRNA_M-pyrifera_M_contig111052.2312.1 ID=mRNA_M-pyrifera_M_contig111052.2312.1|Name=mRNA_M-pyrifera_M_contig111052.2312.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig111052:7..590- (Macrocystis pyrifera P11B4 male)
GGCCACGCCGACGCCAACCTCATCGCCAAGTGGAAGCGGGGCCACGCCGA
CGCCAACCTCATCGCCAAGTGGAAGCGGGCTGGCTACGAACGGCTGTGCT
GCCTGCAGTGCATCCAGACGCGCGACCACAACTACGGCACCACGTGCATC
TGCCGCGTGCCGCGCAAGCAGCTCGACGAGGAGAAGGTCGTCGAGTGCGC
TGGCTACGAACGGCTGTGCTGCCTGCAGTGCATCCAGACGCGCGACCACA
ACTACGGCACCACGTGCATCTGCCGCGTGCCGCGCAAGCAGCTCGACGAG
GAGAAGGTCGTCGAGTGC
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