prot_M-pyrifera_M_contig11098.2302.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11098.2302.1
Unique Nameprot_M-pyrifera_M_contig11098.2302.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length254
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11098.2302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 175..193
score: 40.13
coord: 59..70
score: 44.79
coord: 119..134
score: 50.78
coord: 150..160
score: 29.55
NoneNo IPR availablePANTHERPTHR46527FAMILY NOT NAMEDcoord: 125..248
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 1..28
score: 10.812

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11098contigM-pyrifera_M_contig11098:6531..7969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11098.2302.1mRNA_M-pyrifera_M_contig11098.2302.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11098 6531..7969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11098.2302.1 ID=prot_M-pyrifera_M_contig11098.2302.1|Name=mRNA_M-pyrifera_M_contig11098.2302.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
APCIRRPLSAQTGNCRFGDRCRNSHDLSASRGDRGGGNAAESSAGWASAG
FGSGGGFGGGGGGDRDSFGGNPSSATSGGDRISFRDSQSGQSHGGRARDG
GGGVSRGGGGSDGGGGFGGGGGFGSAGGFGGGRGFSSGGGFGGSGGAVAF
GPGFSSIGGGGGDGSGGGGGGGGGGGGFGGGNGAGSFPRSSGIRRSGANR
SGQAAPPEVLATWYTDEDKLSAGDLREYEAPKFRVGFIPVVPPPRRFCFP
QEY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH