prot_M-pyrifera_M_contig99887.22974.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99887.22974.1
Unique Nameprot_M-pyrifera_M_contig99887.22974.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length86
Homology
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: A0A7L3UW16_MOLAT (ERCC1 protein (Fragment) n=1 Tax=Molothrus ater TaxID=84834 RepID=A0A7L3UW16_MOLAT)

HSP 1 Score: 96.3 bits (238), Expect = 3.020e-22
Identity = 49/86 (56.98%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            SSSI+VS RQRGNP+L  +R VP+ F D+G   PD+V+G   C LFLSLRYH +HP YI  RL      FGL VLLL VDV D  +
Sbjct:  128 SSSIIVSPRQRGNPVLRFIRNVPWEFGDVG---PDFVLGTSSCALFLSLRYHHLHPGYIHERLRALGRSFGLQVLLLQVDVRDPQQ 210
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: UPI001B800B88 (DNA excision repair protein ERCC-1 n=1 Tax=Onychostruthus taczanowskii TaxID=356909 RepID=UPI001B800B88)

HSP 1 Score: 96.7 bits (239), Expect = 3.040e-22
Identity = 49/86 (56.98%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            SS I+VS RQRGNP+L  +R VP+ F D+G   PD+V+G G C LFLSLRYH +HP YI  RL     G GL VLLL VDV D  +
Sbjct:  208 SSGIIVSPRQRGNPVLRFIRSVPWHFGDIG---PDFVLGAGACALFLSLRYHRLHPEYIHERLRALGRGCGLRVLLLQVDVRDPHQ 290
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: A0A8C3XAJ7_9PASS (Uncharacterized protein n=1 Tax=Cyanoderma ruficeps TaxID=181631 RepID=A0A8C3XAJ7_9PASS)

HSP 1 Score: 95.1 bits (235), Expect = 3.570e-22
Identity = 49/86 (56.98%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            SSSI+VS RQRGNP+L  +R VP+ F D+    PDYV+G+  C LFLSLRYH +HP YI  RL      FGL VLLL VDV D  +
Sbjct:  131 SSSIIVSPRQRGNPVLKFIRNVPWEFGDVV---PDYVLGQSSCALFLSLRYHHLHPEYIHERLRALGRSFGLQVLLLQVDVRDPQQ 213
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: UPI000B3E2191 (DNA excision repair protein ERCC-1 n=1 Tax=Numida meleagris TaxID=8996 RepID=UPI000B3E2191)

HSP 1 Score: 95.1 bits (235), Expect = 3.710e-22
Identity = 48/86 (55.81%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            SS I+VS RQRGNP+L  +R VP+ F D+    PDYV+G+  C LFLSLRYH +HP YI  RL    G + L VLLL VDV+D  R
Sbjct:   35 SSGIVVSPRQRGNPVLRFIRNVPWEFGDVV---PDYVLGQSACALFLSLRYHHLHPDYIHERLRALAGSYALRVLLLQVDVKDPRR 117
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: UPI001CFD7BC3 (DNA excision repair protein ERCC-1 n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFD7BC3)

HSP 1 Score: 95.5 bits (236), Expect = 1.160e-21
Identity = 49/86 (56.98%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            S+SI+VS RQRGNP+L  +R VP+ F   GE  PDYV+G+  C LFLSLRYH +HP YI  RL G    + L VLLL VDV+D  R
Sbjct:  135 SNSIIVSPRQRGNPVLKFIRNVPWQF---GEIVPDYVLGQSTCALFLSLRYHNLHPNYIHERLQGLGKNYALRVLLLQVDVKDPQR 217
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: A0A7K5Q6H8_9CORV (ERCC1 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K5Q6H8_9CORV)

HSP 1 Score: 92.8 bits (229), Expect = 1.320e-21
Identity = 48/86 (55.81%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            SSSI+VS RQRGNP+L  +R VP+ F D+    PDYV+G+  C LFLSLRYH ++P YI  RL      FGL VLLL VDV D  +
Sbjct:    7 SSSIIVSPRQRGNPVLKFIRNVPWEFGDVV---PDYVLGQSSCALFLSLRYHHLNPGYIHERLRALGRSFGLQVLLLQVDVRDPQQ 89
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: F7DZM3_MONDO (Uncharacterized protein n=3 Tax=Monodelphis domestica TaxID=13616 RepID=F7DZM3_MONDO)

HSP 1 Score: 96.3 bits (238), Expect = 1.340e-21
Identity = 50/86 (58.14%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            S+SILVS RQRGNP+L  +R VP+ F   GE  PDYV+G+  C LFLSLRYH +HP YI  RL G    + L VLLL VDV+D  R
Sbjct:  215 SNSILVSPRQRGNPVLKFIRNVPWEF---GEIVPDYVLGQSTCALFLSLRYHNLHPNYIHERLQGLGKNYALRVLLLQVDVKDPQR 297
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BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: A0A7K8SFR9_9PASS (ERCC1 protein (Fragment) n=1 Tax=Rhodinocichla rosea TaxID=58203 RepID=A0A7K8SFR9_9PASS)

HSP 1 Score: 92.4 bits (228), Expect = 1.420e-21
Identity = 48/81 (59.26%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDV 81
            SSSI+VS RQRGNP+L  +R VP+ F D+G   PD+V+G   C LFLSLRYH +HP YI  RL      FGL VLLL VDV
Sbjct:    8 SSSIIVSPRQRGNPVLRFIRNVPWEFGDVG---PDFVLGTSSCALFLSLRYHHLHPGYIHERLRALGRSFGLQVLLLQVDV 85
[Close]
BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: A0A8C5VZD1_MICMU (ERCC excision repair 1, endonuclease non-catalytic subunit n=2 Tax=Lemuriformes TaxID=376915 RepID=A0A8C5VZD1_MICMU)

HSP 1 Score: 92.8 bits (229), Expect = 1.570e-21
Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            S+SI+VS RQRGNP+L  +R VP+ F D+    PDYV+G+  C LFLSLRYH +HP YI  RL G    F L VLL+ VDV+D  +
Sbjct:   98 SNSIIVSPRQRGNPVLKFVRNVPWEFGDVI---PDYVLGQSTCALFLSLRYHNLHPDYIHERLQGLGKNFALRVLLIQVDVKDPQQ 180
[Close]
BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Match: UPI001301E0E8 (DNA excision repair protein ERCC-1 n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=UPI001301E0E8)

HSP 1 Score: 95.5 bits (236), Expect = 1.780e-21
Identity = 50/86 (58.14%), Postives = 58/86 (67.44%), Query Frame = 0 
Query:    1 SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLRYHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR 86
            SSSI VS RQRGNP+L  +R VP+ F   GE  PDYV+G+  C LFLSLRYH +HP YI  RL G    + L VLLL VDV+D  R
Sbjct:  173 SSSITVSPRQRGNPVLKFIRNVPWEF---GEIVPDYVMGQSTCALFLSLRYHNLHPNYIHDRLQGLGKNYALRVLLLQVDVKDPQR 255
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99887.22974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L3UW16_MOLAT3.020e-2256.98ERCC1 protein (Fragment) n=1 Tax=Molothrus ater Ta... [more]
UPI001B800B883.040e-2256.98DNA excision repair protein ERCC-1 n=1 Tax=Onychos... [more]
A0A8C3XAJ7_9PASS3.570e-2256.98Uncharacterized protein n=1 Tax=Cyanoderma ruficep... [more]
UPI000B3E21913.710e-2255.81DNA excision repair protein ERCC-1 n=1 Tax=Numida ... [more]
UPI001CFD7BC31.160e-2156.98DNA excision repair protein ERCC-1 n=1 Tax=Gracili... [more]
A0A7K5Q6H8_9CORV1.320e-2155.81ERCC1 protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
F7DZM3_MONDO1.340e-2158.14Uncharacterized protein n=3 Tax=Monodelphis domest... [more]
A0A7K8SFR9_9PASS1.420e-2159.26ERCC1 protein (Fragment) n=1 Tax=Rhodinocichla ros... [more]
A0A8C5VZD1_MICMU1.570e-2154.65ERCC excision repair 1, endonuclease non-catalytic... [more]
UPI001301E0E81.780e-2158.14DNA excision repair protein ERCC-1 n=1 Tax=Sarcoph... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004579ERCC1/RAD10/SWI10 familyTIGRFAMTIGR00597TIGR00597coord: 3..84
e-value: 3.6E-22
score: 76.3
IPR004579ERCC1/RAD10/SWI10 familyPFAMPF03834Rad10coord: 3..84
e-value: 3.4E-21
score: 75.4
IPR004579ERCC1/RAD10/SWI10 familyPANTHERPTHR12749EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1coord: 2..84
NoneNo IPR availableGENE3D3.40.50.10130coord: 2..86
e-value: 2.2E-21
score: 77.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..86
NoneNo IPR availablePRODOMPD013585coord: 2..86
e-value: 1.0E-14
score: 189.0
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 2..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99887contigM-pyrifera_M_contig99887:426..683 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99887.22974.1mRNA_M-pyrifera_M_contig99887.22974.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99887 426..683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99887.22974.1 ID=prot_M-pyrifera_M_contig99887.22974.1|Name=mRNA_M-pyrifera_M_contig99887.22974.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
SSSILVSFRQRGNPILPLLRLVPYTFADLGEDGPDYVVGKGVCVLFLSLR
YHLMHPAYIRSRLGGGVGGFGLVVLLLLVDVEDASR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004579ERCC1/RAD10/SWI10
IPR011335Restrct_endonuc-II-like