prot_M-pyrifera_M_contig99856.22958.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99856.22958.1
Unique Nameprot_M-pyrifera_M_contig99856.22958.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
BLAST of mRNA_M-pyrifera_M_contig99856.22958.1 vs. uniprot
Match: D4S797_9FIRM (Exodeoxyribonuclease III n=20 Tax=Selenomonadaceae TaxID=1843491 RepID=D4S797_9FIRM)

HSP 1 Score: 54.3 bits (129), Expect = 3.790e-6
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0
Query:    1 FVDAFRACFPHRSGAYTFWDTTTAARETNCGSRIDLLLIDAALSCRCGALLQVH 54
            FVD FRA +P R+GAYT+W     ARETN G RID  L+ A L  R  A  ++H
Sbjct:  182 FVDTFRALYPDRTGAYTWWSYLRHARETNAGWRIDYFLVSAELRDRIAAA-EIH 234          
BLAST of mRNA_M-pyrifera_M_contig99856.22958.1 vs. uniprot
Match: K9CUQ0_9FIRM (Exodeoxyribonuclease III (Xth) n=1 Tax=Selenomonas sp. F0473 TaxID=999423 RepID=K9CUQ0_9FIRM)

HSP 1 Score: 52.8 bits (125), Expect = 1.360e-5
Identity = 28/55 (50.91%), Postives = 33/55 (60.00%), Query Frame = 0
Query:    1 FVDAFRACFPHRSGAYTFWDTTTAARETNCGSRIDLLLIDAALSCRCGALLQVHA 55
            FVD FRA +P R GAYT+W     ARETN G RID  L+   L  R  A  ++HA
Sbjct:  182 FVDTFRALYPDRRGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRVAAA-EIHA 235          
BLAST of mRNA_M-pyrifera_M_contig99856.22958.1 vs. uniprot
Match: A0A0G1FA55_9BACT (Exodeoxyribonuclease III n=2 Tax=unclassified Parcubacteria group TaxID=1794840 RepID=A0A0G1FA55_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 2.670e-5
Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    2 VDAFRACFPHRSGAYTFWDTTTAARETNCGSRIDLLLI 39
            +D +R  +PH++GAYT+WD  TAARE N G R+D L +
Sbjct:  188 IDTYRHFYPHKTGAYTYWDMKTAARERNVGWRLDYLFV 225          
BLAST of mRNA_M-pyrifera_M_contig99856.22958.1 vs. uniprot
Match: A0A0G1AZ23_9BACT (Exodeoxyribonuclease III n=2 Tax=Patescibacteria group TaxID=1783273 RepID=A0A0G1AZ23_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 7.650e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    2 VDAFRACFPHRSGAYTFWDTTTAARETNCGSRIDLL 37
            +D +R  +PH++GAYT+WD  TAARE N G R+D L
Sbjct:  225 IDTYRHFYPHKTGAYTYWDMKTAARERNVGWRLDYL 260          
BLAST of mRNA_M-pyrifera_M_contig99856.22958.1 vs. uniprot
Match: UPI000D7303AA (LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) lyase 2-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D7303AA)

HSP 1 Score: 50.8 bits (120), Expect = 9.350e-5
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    1 FVDAFRACFPHRSGAYTFWDTTTAARETNCGSRIDLLLIDAALS 44
            FVDAFR   P ++ AYT W TTT+AR+TN G R+D + +D  L+
Sbjct:  244 FVDAFRFFHPDQTEAYTNWSTTTSARQTNYGKRLDYIYVDERLA 287          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99856.22958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D4S797_9FIRM3.790e-651.85Exodeoxyribonuclease III n=20 Tax=Selenomonadaceae... [more]
K9CUQ0_9FIRM1.360e-550.91Exodeoxyribonuclease III (Xth) n=1 Tax=Selenomonas... [more]
A0A0G1FA55_9BACT2.670e-552.63Exodeoxyribonuclease III n=2 Tax=unclassified Parc... [more]
A0A0G1AZ23_9BACT7.650e-555.56Exodeoxyribonuclease III n=2 Tax=Patescibacteria g... [more]
UPI000D7303AA9.350e-552.27LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 1..120
NoneNo IPR availablePANTHERPTHR22748:SF4DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2coord: 1..120
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99856contigM-pyrifera_M_contig99856:142..522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99856.22958.1mRNA_M-pyrifera_M_contig99856.22958.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99856 142..522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99856.22958.1 ID=prot_M-pyrifera_M_contig99856.22958.1|Name=mRNA_M-pyrifera_M_contig99856.22958.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
FVDAFRACFPHRSGAYTFWDTTTAARETNCGSRIDLLLIDAALSCRCGAL
LQVHAVAPAGAGGVRSPASPVVETTHRDHYAREHEAARVCSCPASLVASD
LRPDVMGSDHCPAWATLRLPASALAWP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004808AP_endonuc_1
IPR036691Endo/exonu/phosph_ase_sf