mRNA_M-pyrifera_M_contig110934.2295.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110934.2295.1
Unique NamemRNA_M-pyrifera_M_contig110934.2295.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A059LBJ1_9CHLO (Dihydroorotate dehydrogenase (quinone), mitochondrial (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LBJ1_9CHLO)

HSP 1 Score: 233 bits (595), Expect = 1.470e-74
Identity = 126/203 (62.07%), Postives = 146/203 (71.92%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMER----REKGALWRSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKLA-SAPHTPPLLLKVAPDMEESE 594
            PRD   D   L TEV+G   SNPLGLAAG DK  EAME  L  GFGFVEVG+VTP PQ GN +PRVFRL    A+INRYGFN++G+DAV+ RL  F ER    R    L RSGLVG NVGKNKT++  AADFC+G+S+L P  DYLVVNVSSPNTPGLR+LQ R ALE+L+ RV+  RD LA      PPLLLK+APD+ + E
Sbjct:    3 PRDGRRDPASLRTEVWGRALSNPLGLAAGFDKSAEAMEGALDLGFGFVEVGSVTPLPQPGNPKPRVFRLPSAGAIINRYGFNNDGIDAVKSRLERFRERARAPRASHRL-RSGLVGVNVGKNKTTSDGAADFCAGVSALAPLADYLVVNVSSPNTPGLRALQSRAALEQLLRRVLAARDGLAWDEGPAPPLLLKIAPDLGDDE 204
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A835Y0C0_9CHLO (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0C0_9CHLO)

HSP 1 Score: 231 bits (589), Expect = 3.920e-71
Identity = 118/199 (59.30%), Postives = 141/199 (70.85%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKGALWRSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKLASAPH-TPPLLLKVAPDMEESE 594
            P D   D   L+TEVFGL+FSNP+GLAAG DKH EAM+ ++  GFGFVE+G+VTP PQ GN  PRVFR+ E RA+INRYGFNS G DAV   L AF +     A  + GL+G N+GKNKTS   AAD+C G++ LG   DYLVVNVSSPNTPGLRSLQ R  L+ LV +V   RD +A  P   PPLL+KVAPD+ E +
Sbjct:   98 PVDDRPDPLSLSTEVFGLRFSNPVGLAAGFDKHAEAMQGLMGLGFGFVEIGSVTPQPQPGNPTPRVFRIPEARAIINRYGFNSLGADAVASNLEAFEQAAANSAGVKRGLLGVNLGKNKTSEDAAADYCEGLTKLGRFADYLVVNVSSPNTPGLRSLQGRNELKALVRKVQATRDSMAWGPRGAPPLLVKVAPDLSEDD 296
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A2D4BER9_PYTIN (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BER9_PYTIN)

HSP 1 Score: 228 bits (582), Expect = 3.660e-70
Identity = 116/196 (59.18%), Postives = 147/196 (75.00%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKGALW-RSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKLASAPHTP-PLLLKVAPDM 582
            P D   D   L   V G +F NPLG+AAG DK  EAME +L  GFGFVE+G+VTP PQ GN +PRVFRL+EDRAVINRYGFNS+GL++V  RL A+M RRE  + W R+G++G N+GKNKT+   AAD+  G+ +LG + DYLVVNVSSPNTPGLRSLQ ++ L+ELV+RV+  RD+L +    P PLL+K+APD+
Sbjct:  103 PLDEKTDDEILRVNVLGREFPNPLGMAAGFDKDAEAMEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRAVINRYGFNSQGLESVAKRLEAYMWRRENLSRWHRAGVLGVNLGKNKTTEDAAADYVEGVKALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELVSRVLTARDELVAQLGRPIPLLVKIAPDL 298
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A662X2Z7_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2Z7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.380e-69
Identity = 117/199 (58.79%), Postives = 147/199 (73.87%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREK----GALWRSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKLA-SAPHTPPLLLKVAPDM 582
            P+D   DA  LA +VFG  F NPLG+AAG DK+GEA+E ML  GFG VE+G+VTP PQ GN +PRVFRLSEDR VINRYGFNS+GLD V  RL  ++  RE     G   R+G++G N+GKNKT+   AAD+  G+ +LG + DYLVVNVSSPNTPGLRSLQ ++ L+EL+ RV+E RD++A S     PLL+K+APD+
Sbjct:  100 PKDDQPDASLLAVDVFGQTFPNPLGIAAGFDKNGEAIEGMLDVGFGCVEIGSVTPKPQPGNPKPRVFRLSEDRGVINRYGFNSKGLDDVRARLEKYVASRETRTAPGQGHRAGVLGVNLGKNKTTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRSLQGKQQLQELLVRVLEARDEVAASEKRAIPLLVKIAPDL 298
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A812UEF7_9DINO (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812UEF7_9DINO)

HSP 1 Score: 225 bits (574), Expect = 2.840e-69
Identity = 121/205 (59.02%), Postives = 148/205 (72.20%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKG--ALWRSGLVGANVGKNKTSALDAA-DFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKL----ASAPHTPPLLLKVAPDMEESE 594
            P DS +D PELATE  G+   NP+GLAAG DK GEA++ ML  GFG VEVG+VTP PQ GNA+PRVFRL+ED AV+NRYGFNSEGLD V+ R+ ++M RR     AL R G VG NVGKNK    DA  DF  G+ ++ P+ DY+VVNVSSPNTPGLRSLQR+E L++LV   V+ RD L    +     PPLL+KVAPD+ ++E
Sbjct:   61 PIDSDDDPPELATEWLGMTLGNPIGLAAGFDKGGEAVDGMLGMGFGAVEVGSVTPEPQPGNAKPRVFRLAEDGAVVNRYGFNSEGLDTVQGRVVSYMRRRSDNPAALRRLGPVGVNVGKNKDG--DAVEDFTRGVRTMAPYADYVVVNVSSPNTPGLRSLQRQEQLQQLVTACVQARDGLPWGTSLQRDPPPLLVKVAPDLSDAE 263
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: Q75XR0_EUGGR (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Euglena gracilis TaxID=3039 RepID=Q75XR0_EUGGR)

HSP 1 Score: 222 bits (566), Expect = 9.140e-68
Identity = 117/211 (55.45%), Postives = 145/211 (68.72%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKGALWRSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKL-------------ASAPHTPPLLLKVAPDMEESE 594
            PRD   D  +L  EV+GLKFSNPLGLAAG DKHGEA++A+L +GFGFVE+GTVTP PQ GN  PR+FRL +DRA+INRYGFNS+GL AV  RL A   R       R GLVG NVGKNK     AAD+  G+  LGP+ DYLV+NVSSPNTPGLR+LQ+R A+ +L+   +  RD++             ++AP   PLL+K+APD+   E
Sbjct:   88 PRDVHPDPADLEMEVWGLKFSNPLGLAAGFDKHGEAVDALLGTGFGFVEIGTVTPLPQPGNPSPRMFRLEQDRAIINRYGFNSQGLAAVRKRLEARQHRPAP----RGGLVGVNVGKNKLQEDAAADYSKGLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDEVVRDADGRRAAAGKSAAPL--PLLIKIAPDLTAEE 292
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: K3WLG9_GLOUD (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLG9_GLOUD)

HSP 1 Score: 221 bits (564), Expect = 2.120e-67
Identity = 110/200 (55.00%), Postives = 148/200 (74.00%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKGALW-RSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKLASAPHTP-PLLLKVAPDMEESE 594
            PRD G D+  L+ + FG +F NPLG+AAG DK+ EA+E +L  GFGFVE+G+VTP PQ GN +PRVFRL+EDR VINRYGFNS G+DAV   L +++  RE    + RSG++G N+GKNKT+   AAD+  G+ +LG + DYLVVNVSSPNTPGLRSLQ ++ L+EL+ RV++ R  + +  +   PLL+K+APD+ E +
Sbjct:  110 PRDHGTDSLVLSVKAFGQEFPNPLGMAAGFDKNAEAIEGLLDIGFGFVEIGSVTPKPQPGNPKPRVFRLTEDRGVINRYGFNSSGMDAVAKSLESYVTTRELSKRFHRSGVLGVNLGKNKTTEDAAADYVEGVYTLGKYADYLVVNVSSPNTPGLRSLQGKQQLQELLTRVLDARKNVEAKENRKIPLLVKIAPDLTEDD 309
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A5D6XSB7_9STRA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSB7_9STRA)

HSP 1 Score: 221 bits (562), Expect = 3.920e-67
Identity = 113/200 (56.50%), Postives = 145/200 (72.50%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKGALW-RSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKL-ASAPHTPPLLLKVAPDMEESE 594
            PRD G D+  L   V G +F+NPLG+AAG DK  EAME +L  GFGFVE+G+VTP PQ GN +PRVFRL+EDR VINRYGFNS G++AV  RL A++  R     + R+G++G N+GKNKT+   AAD+ +G+  LG + DYLVVNVSSPNTPGLRSLQ R+ LE L+ARV+  RD + A      PLL+K+APD+ + +
Sbjct:  104 PRDHGTDSELLKVNVLGQEFANPLGMAAGFDKDAEAMEGLLDMGFGFVEIGSVTPQPQEGNPKPRVFRLAEDRGVINRYGFNSAGVEAVAARLDAYVATRALSQRFHRAGVLGVNLGKNKTTEDAAADYIAGVHRLGKYADYLVVNVSSPNTPGLRSLQGRQQLEALLARVLAARDAVEAKERRRIPLLVKIAPDLTDDD 303
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A7J7UZZ3_PIPKU (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7UZZ3_PIPKU)

HSP 1 Score: 215 bits (547), Expect = 1.460e-66
Identity = 112/199 (56.28%), Postives = 141/199 (70.85%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKGALWRSGL-VGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKLASAPHTPPLLLKVAPDMEESE 594
            PR + +D+  L   V G KF NP+G+AAG DKHGEA++ +   GFGFVE+G+VTP PQ GN RPRVFRL ED+AVINRYGFNS GL AVE RL A   ++ +  L   GL +G N+GKNKTSA  A+D+  G+  LGP  DYLVVNVSSPNT GLRSLQ ++ L  L+ +V++ RD L   PH P LL+K+APD+   +
Sbjct:   68 PRVTFQDSDMLEVRVLGRKFRNPVGVAAGFDKHGEAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSAVEHRLRA--RQQTQARLTEGGLPLGINLGKNKTSADAASDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKDELRHLLTKVLQERDAL-KGPHKPALLVKIAPDLSAQD 263
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BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Match: A0A2T7NGX8_POMCA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NGX8_POMCA)

HSP 1 Score: 219 bits (557), Expect = 2.250e-66
Identity = 112/198 (56.57%), Postives = 142/198 (71.72%), Query Frame = 1 
Query:    1 PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEVGTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERREKGALWRSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPNTPGLRSLQRREALEELVARVVEVRDKLASAPHTPPLLLKVAPDMEESE 594
            PR    D   L TEV+G  F+NP+GLAAG DKHGEA++ +L +GFGFVE+G+VTP PQ GN +PRVFRL+EDRAVINRYGFNSEG DAV  RL     R  +  +   GL+G N+GKNK S    +D+ +G+   G   DYLV+NVSSPNTPGLR LQ ++ LEEL+ +VV  RD+L  +P  PPLLLK+APD+ + +
Sbjct:   73 PRPRVADPLSLKTEVWGRTFNNPVGLAAGFDKHGEAVDGLLKAGFGFVEIGSVTPVPQPGNEKPRVFRLTEDRAVINRYGFNSEGHDAVFKRLR---HREAEPVVSERGLMGVNLGKNKLSGHPVSDYVTGVRIFGKVADYLVINVSSPNTPGLRDLQGKKELEELLDQVVAERDRLRVSPK-PPLLLKIAPDLSDKD 266
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110934.2295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059LBJ1_9CHLO1.470e-7462.07Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A835Y0C0_9CHLO3.920e-7159.30Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A2D4BER9_PYTIN3.660e-7059.18Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A662X2Z7_9STRA1.380e-6958.79Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A812UEF7_9DINO2.840e-6959.02Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
Q75XR0_EUGGR9.140e-6855.45Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
K3WLG9_GLOUD2.120e-6755.00Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A5D6XSB7_9STRA3.920e-6756.50Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A7J7UZZ3_PIPKU1.460e-6656.28Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A2T7NGX8_POMCA2.250e-6656.57Dihydroorotate dehydrogenase (quinone), mitochondr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110934contigM-pyrifera_M_contig110934:1..594 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score227.6
Seed ortholog evalue5e-57
Seed eggNOG ortholog36331.EPrPI00000019822
Preferred nameDHODH
KEGG rclassRC00051
KEGG koko:K00254
KEGG ReactionR01868
KEGG Pathwayko00240,ko01100,map00240,map01100
KEGG ModuleM00051
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0004152,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005758,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006213,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0007275,GO:0007565,GO:0007584,GO:0007589,GO:0007595,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009163,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009410,GO:0009605,GO:0009987,GO:0009991,GO:0010033,GO:0010181,GO:0010243,GO:0010821,GO:0010941,GO:0010942,GO:0014070,GO:0014074,GO:0016020,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0019866,GO:0022414,GO:0022603,GO:0030879,GO:0031000,GO:0031090,GO:0031667,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0033043,GO:0034404,GO:0034641,GO:0034654,GO:0036094,GO:0036270,GO:0036477,GO:0042221,GO:0042493,GO:0042594,GO:0042981,GO:0043025,GO:0043065,GO:0043067,GO:0043068,GO:0043167,GO:0043168,GO:0043200,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043279,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046112,GO:0046134,GO:0046390,GO:0046483,GO:0046903,GO:0048037,GO:0048038,GO:0048039,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048732,GO:0048856,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051704,GO:0055086,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0072527,GO:0072528,GO:0090140,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1903576
EggNOG free text desc.Dihydroorotate dehydrogenase, mitochondrial. Source PGD
EggNOG OGs1MAP8@121069,COG0167@1,KOG1436@2759
EC1.3.5.2
COG Functional cat.F
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size594
Cds size594
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815621.3806374-CDS-M-pyrifera_M_contig110934:0..5941622815621.3806374-CDS-M-pyrifera_M_contig110934:0..594Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110934 1..594 +
1692277491.4613776-CDS-M-pyrifera_M_contig110934:0..5941692277491.4613776-CDS-M-pyrifera_M_contig110934:0..594Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110934 1..594 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110934.2295.1prot_M-pyrifera_M_contig110934.2295.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110934 1..594 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110934.2295.1

>prot_M-pyrifera_M_contig110934.2295.1 ID=prot_M-pyrifera_M_contig110934.2295.1|Name=mRNA_M-pyrifera_M_contig110934.2295.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=198bp
PRDSGEDAPELATEVFGLKFSNPLGLAAGMDKHGEAMEAMLSSGFGFVEV
GTVTPAPQAGNARPRVFRLSEDRAVINRYGFNSEGLDAVEPRLHAFMERR
EKGALWRSGLVGANVGKNKTSALDAADFCSGISSLGPHCDYLVVNVSSPN
TPGLRSLQRREALEELVARVVEVRDKLASAPHTPPLLLKVAPDMEESE
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mRNA from alignment at M-pyrifera_M_contig110934:1..594+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110934.2295.1 ID=mRNA_M-pyrifera_M_contig110934.2295.1|Name=mRNA_M-pyrifera_M_contig110934.2295.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig110934:1..594+ (Macrocystis pyrifera P11B4 male)
CCTCGGGATTCGGGAGAGGACGCTCCAGAGCTTGCGACGGAAGTATTTGG
GCTCAAGTTCTCGAACCCTCTTGGATTGGCAGCCGGGATGGACAAGCACG
GGGAAGCGATGGAAGCTATGCTCTCGAGTGGGTTTGGTTTTGTGGAGGTT
GGGACGGTGACGCCTGCGCCGCAGGCAGGGAATGCTCGGCCGCGCGTGTT
TCGCCTGTCTGAGGACCGTGCGGTGATCAACCGGTACGGGTTCAACTCGG
AGGGTTTGGATGCGGTGGAGCCGCGGCTGCATGCGTTCATGGAGCGTCGA
GAAAAGGGCGCATTGTGGCGGAGTGGGTTGGTGGGGGCGAATGTGGGCAA
GAACAAGACATCTGCGTTGGATGCTGCGGATTTCTGCAGCGGCATTTCGA
GTCTAGGTCCCCATTGCGACTATTTGGTGGTGAATGTGTCGTCACCCAAC
ACTCCCGGATTGCGATCTCTGCAGCGAAGGGAAGCGTTGGAGGAGTTGGT
GGCGCGCGTGGTGGAGGTGAGGGACAAGCTGGCGTCTGCCCCCCACACCC
CACCGCTGCTGCTCAAGGTCGCACCAGACATGGAGGAAAGCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110934:1..594+

>mRNA_M-pyrifera_M_contig110934.2295.1 ID=mRNA_M-pyrifera_M_contig110934.2295.1|Name=mRNA_M-pyrifera_M_contig110934.2295.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1188bp|location=Sequence derived from alignment at M-pyrifera_M_contig110934:1..594+ (Macrocystis pyrifera P11B4 male)
CCTCGGGATTCGGGAGAGGACGCTCCAGAGCTTGCGACGGAAGTATTTGG
GCTCAAGTTCTCGAACCCTCTTGGATTGGCAGCCGGGATGGACAAGCACG
GGGAAGCGATGGAAGCTATGCTCTCGAGTGGGTTTGGTTTTGTGGAGGTT
GGGACGGTGACGCCTGCGCCGCAGGCAGGGAATGCTCGGCCGCGCGTGTT
TCGCCTGTCTGAGGACCGTGCGGTGATCAACCGGTACGGGTTCAACTCGG
AGGGTTTGGATGCGGTGGAGCCGCGGCTGCATGCGTTCATGGAGCGTCGA
GAAAAGGGCGCATTGTGGCGGAGTGGGTTGGTGGGGGCGAATGTGGGCAA
GAACAAGACATCTGCGTTGGATGCTGCGGATTTCTGCAGCGGCATTTCGA
GTCTAGGTCCCCATTGCGACTATTTGGTGGTGAATGTGTCGTCACCCAAC
ACTCCCGGATTGCGATCTCTGCAGCGAAGGGAAGCGTTGGAGGAGTTGGT
GGCGCGCGTGGTGGAGGTGAGGGACAAGCTGGCGTCTGCCCCCCACACCC
CACCGCTGCTGCTCAAGGTCGCACCAGACATGGAGGAAAGCGAGCCTCGG
GATTCGGGAGAGGACGCTCCAGAGCTTGCGACGGAAGTATTTGGGCTCAA
GTTCTCGAACCCTCTTGGATTGGCAGCCGGGATGGACAAGCACGGGGAAG
CGATGGAAGCTATGCTCTCGAGTGGGTTTGGTTTTGTGGAGGTTGGGACG
GTGACGCCTGCGCCGCAGGCAGGGAATGCTCGGCCGCGCGTGTTTCGCCT
GTCTGAGGACCGTGCGGTGATCAACCGGTACGGGTTCAACTCGGAGGGTT
TGGATGCGGTGGAGCCGCGGCTGCATGCGTTCATGGAGCGTCGAGAAAAG
GGCGCATTGTGGCGGAGTGGGTTGGTGGGGGCGAATGTGGGCAAGAACAA
GACATCTGCGTTGGATGCTGCGGATTTCTGCAGCGGCATTTCGAGTCTAG
GTCCCCATTGCGACTATTTGGTGGTGAATGTGTCGTCACCCAACACTCCC
GGATTGCGATCTCTGCAGCGAAGGGAAGCGTTGGAGGAGTTGGTGGCGCG
CGTGGTGGAGGTGAGGGACAAGCTGGCGTCTGCCCCCCACACCCCACCGC
TGCTGCTCAAGGTCGCACCAGACATGGAGGAAAGCGAG
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