prot_M-pyrifera_M_contig99780.22940.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99780.22940.1
Unique Nameprot_M-pyrifera_M_contig99780.22940.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length228
Homology
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A2D9CI68_9BACT (tRNA modification GTPase MnmE n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D9CI68_9BACT)

HSP 1 Score: 210 bits (535), Expect = 1.680e-62
Identity = 116/229 (50.66%), Postives = 148/229 (64.63%), Query Frame = 0
Query:    1 DELESELVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAIDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLPGQHTAQGA-IPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            ++L  +L+   G  +G+ V  D  +VVL+G PNAGKS + NALLG  R +VS+RAGTT                 GAV L DLAGLGD AIDAID  AQ+ AR  ID+ADA++WCDP+GRFDE   +     P+VRVRTKSDLP Q     + + VCA D + + VLRRAIADA    +G+GVGVFVPRHRRA+ +AI  I  A+  +D    S++ PEL+A GL E+L
Sbjct:  194 EQLREQLIEQVGGASGDRVVRDAPSVVLIGRPNAGKSALFNALLGTTRAVVSDRAGTTRDALVEPLDLSQDVPGAGAVELVDLAGLGDRAIDAIDEQAQQRARGFIDEADAVLWCDPSGRFDERLFETRDGVPMVRVRTKSDLPAQSPIDSSGVSVCAFDASTLGVLRRAIADATSRASGSGVGVFVPRHRRALNMAIESIDRAMQSIDTRTRSLQHPELIALGLRESL 422          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A2A4RNI2_9BACT (tRNA modification GTPase MnmE n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RNI2_9BACT)

HSP 1 Score: 201 bits (512), Expect = 4.900e-59
Identity = 118/226 (52.21%), Postives = 143/226 (63.27%), Query Frame = 0
Query:    7 LVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAIDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLP---GQHT-AQGAIPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            +V   G  +G+ V  DL  VV VG PNAGKS++ NALLG QR  VS++AGTT                 G+V L DLAG+G+ AID+IDA AQ  A E I++A  I+WCDP G FD  SI LP   P+VRVRTKSDLP   G  T    A+ VCA+DGT +  L+RAIADA   RTG+GVGVFVPRHRRA+  +  GI  A+  +D     IE PELVA GL +AL
Sbjct:  201 VVAQIGTASGDRVHSDLPKVVFVGKPNAGKSSLFNALLGVQRATVSDQAGTTRDVIIEQMDLAKHVPGAGSVELVDLAGVGEAAIDSIDASAQTRALEVIEEAGVILWCDPAGVFDAESIALPTATPIVRVRTKSDLPLSTGLRTKTNNALAVCALDGTALGSLQRAIADAVSRRTGSGVGVFVPRHRRALIDSKDGIDAAIGHVDSTKRVIEEPELVAIGLRDAL 426          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A3M2CEY8_9BACT (tRNA modification GTPase MnmE n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CEY8_9BACT)

HSP 1 Score: 188 bits (478), Expect = 7.170e-54
Identity = 113/237 (47.68%), Postives = 141/237 (59.49%), Query Frame = 0
Query:    3 LESELVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHA---IDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLPGQHTAQGA--------IPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            ++++LV   GA AG     D   VVLVG PNAGKST+ NALL   R +VS+R GTT                 G V L DLAGL D A   ID ID  AQ LAR+RI +ADA++WCDPTG FD  +  LP + P +RVRTKSDLPG    +G         IPVCA+DGT ++ LRRAIAD A   TG    + +PRHRRAIA  +  +H A   +D EA ++  PEL+A+ L  A+
Sbjct:  205 VQADLVAIIGAAAGAAAERDTPEVVLVGRPNAGKSTLFNALLARPRAIVSDRPGTTRDALAEPLDLSADAPGAGVVTLVDLAGLTDQAEGGIDEIDTAAQHLARQRIARADALLWCDPTGAFDPLAFPLP-NLPTIRVRTKSDLPGSPDRKGVDGDRSSPHIPVCALDGTNLATLRRAIADTAT-NTGPAGAIALPRHRRAIARTLAHLHQARDAVDPEAHALAEPELIAAALRAAI 439          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A2E2NBJ4_9BACT (tRNA modification GTPase MnmE n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E2NBJ4_9BACT)

HSP 1 Score: 157 bits (396), Expect = 5.390e-42
Identity = 92/203 (45.32%), Postives = 118/203 (58.13%), Query Frame = 0
Query:   26 VVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAIDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLPGQHTAQGAIPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            VVLVG PNAGKS + NALLG +R +VS+R GTT                 G+V L DLAG+GD A+D +DA+AQ +ARER+  AD ++ CDP GRF E    L   A VVRVRTK+D+    T   A+ VCAIDG  ++ LRRAIADAA    G      VPRH   +  A+  ++ A++       ++  PEL A  L  AL
Sbjct:  220 VVLVGEPNAGKSALFNALLGRRRAVVSDRPGTTRDALEESLDLTTEAPGAGSVTLVDLAGIGDRAVDPLDAEAQEIARERVRGADVVLHCDPNGRFSE----LDTRATVVRVRTKADIATGETESEALAVCAIDGWRLAPLRRAIADAAQTVRGAARSTVVPRHAAELRAALHAMNNAISTFSGVERTLRDPELTAGELRTAL 418          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A4P5X401_9BACT (tRNA modification GTPase MnmE n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A4P5X401_9BACT)

HSP 1 Score: 149 bits (377), Expect = 5.440e-39
Identity = 93/248 (37.50%), Postives = 130/248 (52.42%), Query Frame = 0
Query:    3 LESELVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAI----------DAIDADAQRLARERIDKADAIIWCDPTGRFDESSI--KLPADA-----PVVRVRT-----KSDLPGQHTAQGAIPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            L +++V H G  +G+     L  V LVG PNAGKST+ NALL +QR + S RAGTT                 G++ L DL GL  HA            A D  AQ  AR  +  AD +IWCDPTGRFD  ++  +L  D      P++RVRT     +++      +Q  + VCA+DG  +S LRRA+AD AC     G+   +PR+RR+++ A   I  A+T++   A  ++ PE +A  L  AL
Sbjct:  205 LHTQIVDHMGGASGQTASSALPRVALVGLPNAGKSTLFNALLRQQRAIASPRAGTTRDIIEEELDLSRDVLGAGSITLQDLPGLS-HATTTNTLDASVQSAADLAAQHAARAAVQSADVLIWCDPTGRFDTLALAGQLHLDTWHAAQPIIRVRTFGDHVRTEAASDANSQAILTVCAVDGWNLSSLRRAVADQACVGKAAGIAALLPRYRRSLSEAASAISYAITDVPANATRLDEPETIAESLRLAL 451          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: UPI001AC8295B (tRNA modification GTPase MnmE n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001AC8295B)

HSP 1 Score: 147 bits (371), Expect = 3.080e-38
Identity = 95/236 (40.25%), Postives = 120/236 (50.85%), Query Frame = 0
Query:    3 LESELVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAIDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLPGQ----------HTAQGAIPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            L   +  H GA AG         VVLVG PNAGKST+ NALLG +R +    AGTT                 G V L DLAGL D   D  DA AQ  AR  I +AD ++WCDPT RFDE  +  P  A V+R+RT +D P                 A+PVCA+DG  ++ L+RAIA+ AC+     +   +PRHR A+  AI  I +A T +D     +  PE +A  L  AL
Sbjct:  200 LRQAIASHLGARAGAEATVAQPLVVLVGRPNAGKSTLFNALLGRRRAVAGPIAGTTRDALVEPLDLSPSAPGAGTVQLADLAGLDDMQSDQPDALAQAAARHTIARADLLLWCDPTSRFDERDLP-PTSAEVLRIRTFADRPADPHPRVPQSSFRVQHSALPVCALDGWHLADLKRAIAEHACSSNQAPLAALLPRHRAAMHDAIGAIDLAATLIDTRDTGLRRPEELAQTLRAAL 434          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A7C3Q253_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C3Q253_9BACT)

HSP 1 Score: 137 bits (346), Expect = 2.020e-35
Identity = 88/219 (40.18%), Postives = 112/219 (51.14%), Query Frame = 0
Query:   12 GAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAIDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADA--PVVRVRTKSDLPGQHTAQGAIPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            GA  G    D    V +VG PNAGKST+ NALL  +R + S  AGTT                 G + L DL GL       I+  +QR AR+    ADA+IWCDP G FDE S+     A   V+RVRT  D P +      + VCA+DG  +  LRRA+AD        GV   +PRHRRA+AVA   +  A   +D +A ++  PE+VA  L  AL
Sbjct:  111 GASGGREHTDGQPRVAIVGNPNAGKSTLFNALLERRRAVASPIAGTTRDVLSERLDLSRVAPGAGEIELQDLPGLDPRVGSVIEVQSQRAARDAAAHADALIWCDPDGNFDERSLADLGGAGKAVLRVRTFGDRPAEGLG-AHVEVCALDGWHLDTLRRALADVTGGSISEGVASLLPRHRRALAVARKSLESARRSIDPDAAALAAPEVVAGHLRHAL 328          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A3B1DYR3_9ZZZZ (GTPase and tRNA-U34 5-formylation enzyme TrmE n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DYR3_9ZZZZ)

HSP 1 Score: 139 bits (350), Expect = 3.220e-35
Identity = 88/204 (43.14%), Postives = 115/204 (56.37%), Query Frame = 0
Query:   26 VVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAIDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLPG-QHTAQGAIPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADSIEMPELVASGLCEAL 228
            VVLVG PNAGKST+ NALLG +R +V+E  GTT                  +V L DL GL     DA  + +Q LA E I +ADA++ CDP+G F      +P   PV+RVRTK+D PG +  + G + VCA+DG  + V+RR IAD A    G    V + RH R I  A+  +  A  +LD  A +++ PELVA GL  AL
Sbjct:  235 VVLVGVPNAGKSTLFNALLGRRRSVVAEEVGTTRDVLLEVLHLAEVAGPGLSVQLADLPGL-----DATSS-SQALALEAIHRADAVVHCDPSGEFSTGLWAIPESTPVLRVRTKADQPGGREGSSGDVEVCALDGWHLGVVRRGIADIALRAPGGSCSVALTRHAREITHAVEQLAAAEAQLDPTARALDAPELVADGLRSAL 432          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: UPI00199F2E4B (50S ribosome-binding GTPase n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI00199F2E4B)

HSP 1 Score: 135 bits (340), Expect = 1.360e-33
Identity = 96/253 (37.94%), Postives = 129/253 (50.99%), Query Frame = 0
Query:    2 ELESELVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGLGDHAIDA--------IDADAQRLARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLPGQHTAQGAIP--------VCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGIHMALTELDREADS----------IEMPELVASGLCEAL 228
            +L   L+ + G   G   R     VVL GAPNAGKST+ NALLG  R +VS  AGTT                   V LTDLAG+    + A        ID++AQ+ AR+ I +AD ++ CDP+GRF +  +     APV+R++TK+DLP  H A+   P        VCA+DG  +  LRRAIAD+A     +G    +PRH+R++  A+  I  A+  L     S          I  PEL+A  L EAL
Sbjct:  214 QLRESLMAYVGHVKGAESRSANPVVVLAGAPNAGKSTLFNALLGRHRAVVSRVAGTTRDVIVEDLDLSRDIPGGPVVKLTDLAGVDAALLRAAPHSTALHIDSEAQQRARQAIAEADVVVHCDPSGRFVDD-LPQHGKAPVIRLQTKADLPHVHQAKSPAPWAVAPSLAVCALDGWNLGPLRRAIADSASQDRASGSLSVLPRHQRSLTHAVASISEAIARLKAPVQSSSPGGPDHQAIMAPELIAGSLREAL 465          
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Match: A0A651EU60_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A651EU60_9BACT)

HSP 1 Score: 134 bits (338), Expect = 1.860e-33
Identity = 99/237 (41.77%), Postives = 128/237 (54.01%), Query Frame = 0
Query:    3 LESELVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVLVSERAGTTXXXXXXXXXXXXXXXXXGAVLLTDLAGL--GDHAIDAIDADAQRLARERIDKADAIIWCDPTGRFDESSIK-LPADAP--VVRVRTKSDLPGQHTAQGAIPVCAIDGTMMSVLRRAIADAACARTGTGV----GVFVPRHRRAIAVAIMGIHMALTELD--READSIEMPELVASGLCEAL 228
            L+ E+V   G G+   V +    + LVGAPNAGKST+ NALLG +R +VSE+AGTT                  A+ L DLAGL  G  +       AQ  AR+ I  ADAI+WCDP+G+FD++ +  L A+ P  V+RVRTK+DL         + VCA+DG  M  L RA+ DAA    G       G  V RHR A+  A   +  A+  ++  REA SIE   LVAS L  AL
Sbjct:  205 LDVEMVSLLGPGSRATVDESPVRMALVGAPNAGKSTLFNALLGRERAIVSEQAGTTRDVIAEALPRDPMMPHAPAIELLDLAGLDAGSASDGRAHGAAQLAARDAIGAADAIVWCDPSGQFDDAKVAHLVAERPAMVLRVRTKADLVAPQDTGEMLAVCALDGWRMDALHRALCDAATTVRGYSTPLAPGSLVSRHRAALQEAQRCVREAMELINPAREAHSIE---LVASSLRLAL 438          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99780.22940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9CI68_9BACT1.680e-6250.66tRNA modification GTPase MnmE n=1 Tax=Phycisphaera... [more]
A0A2A4RNI2_9BACT4.900e-5952.21tRNA modification GTPase MnmE n=1 Tax=bacterium Ta... [more]
A0A3M2CEY8_9BACT7.170e-5447.68tRNA modification GTPase MnmE n=1 Tax=Planctomycet... [more]
A0A2E2NBJ4_9BACT5.390e-4245.32tRNA modification GTPase MnmE n=1 Tax=Phycisphaera... [more]
A0A4P5X401_9BACT5.440e-3937.50tRNA modification GTPase MnmE n=1 Tax=Phycisphaera... [more]
UPI001AC8295B3.080e-3840.25tRNA modification GTPase MnmE n=1 Tax=Phycisphaera... [more]
A0A7C3Q253_9BACT2.020e-3540.18Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
A0A3B1DYR3_9ZZZZ3.220e-3543.14GTPase and tRNA-U34 5-formylation enzyme TrmE n=1 ... [more]
UPI00199F2E4B1.360e-3337.9450S ribosome-binding GTPase n=1 Tax=Pyrinomonadace... [more]
A0A651EU60_9BACT1.860e-3341.77Uncharacterized protein n=1 Tax=Phycisphaeraceae b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006073GTP binding domainPRINTSPR00326GTP1OBGcoord: 80..95
score: 28.88
coord: 26..46
score: 47.37
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 26..115
e-value: 2.2E-15
score: 56.7
IPR027368tRNA modification GTPase MnmE domain 2GENE3D1.20.120.430coord: 12..212
e-value: 4.7E-28
score: 100.9
NoneNo IPR availableGENE3D3.40.50.300coord: 23..179
e-value: 4.7E-28
score: 100.9
NoneNo IPR availablePANTHERPTHR42714FAMILY NOT NAMEDcoord: 16..174
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99780contigM-pyrifera_M_contig99780:3..686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99780.22940.1mRNA_M-pyrifera_M_contig99780.22940.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99780 3..686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99780.22940.1 ID=prot_M-pyrifera_M_contig99780.22940.1|Name=mRNA_M-pyrifera_M_contig99780.22940.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
DELESELVLHSGAGAGEIVRDDLATVVLVGAPNAGKSTMMNALLGEQRVL
VSERAGTTRDAISERLDLSRDLPGAGAVLLTDLAGLGDHAIDAIDADAQR
LARERIDKADAIIWCDPTGRFDESSIKLPADAPVVRVRTKSDLPGQHTAQ
GAIPVCAIDGTMMSVLRRAIADAACARTGTGVGVFVPRHRRAIAVAIMGI
HMALTELDREADSIEMPELVASGLCEAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR027368MnmE_dom2
IPR027417P-loop_NTPase