prot_M-pyrifera_M_contig99766.22932.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99766.22932.1
Unique Nameprot_M-pyrifera_M_contig99766.22932.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length87
Homology
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: A0A3L8S7N3_CHLGU (40S ribosomal protein S29 n=1 Tax=Chloebia gouldiae TaxID=44316 RepID=A0A3L8S7N3_CHLGU)

HSP 1 Score: 98.6 bits (244), Expect = 7.480e-25
Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGP-----SRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKV 86
            M H  ++ SHPRKFG+GSRSW V   L F                PALT       SRVC+N+HGLIRKY +N+CRQCFR+YAKDIGF+KV
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSWSV---LPFALRGPWLPRSPSHPPRPALTASLCSPHSRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKV 88          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: RS29_GRIJA (40S ribosomal protein S29 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=RS29_GRIJA)

HSP 1 Score: 93.6 bits (231), Expect = 1.420e-23
Identity = 44/87 (50.57%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            M H N+W SHPRK+GKGSRS                                ++C NKHGLIRKY MNICRQCFREYAKDIGF+K R
Sbjct:    1 MGHQNIWYSHPRKYGKGSRS-------------------------------CKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: A0A6A5N100_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5N100_LUPAL)

HSP 1 Score: 92.4 bits (228), Expect = 4.730e-23
Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            M HSNVWNSHP+ +G GSR+W+V                         T  +RVC N HGLIRKY +N CRQCFR  AK+IGF+K R
Sbjct:    1 MGHSNVWNSHPKNYGPGSRTWYV-------------------------TASNRVCGNPHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 62          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: A0A0D3HUX4_9ORYZ (Uncharacterized protein n=1 Tax=Oryza barthii TaxID=65489 RepID=A0A0D3HUX4_9ORYZ)

HSP 1 Score: 92.0 bits (227), Expect = 1.120e-22
Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            M HSNVWNSHP+ +G GSR W+       C      +P    S    +T   RVC N HGLIRKY +  CRQCFR  AKDIGF+K R
Sbjct:    1 MGHSNVWNSHPKNYGPGSRVWYG-----CCSPSSPPSPTSSASDR-GVTWVGRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 81          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: A0A0E0FCF3_9ORYZ (Uncharacterized protein n=1 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0FCF3_9ORYZ)

HSP 1 Score: 92.0 bits (227), Expect = 1.840e-22
Identity = 49/99 (49.49%), Postives = 54/99 (54.55%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWF----VPPPLRFCXXXXXXAPLQRESGGPALT--------GPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            M HSNVWNSHP+ +G GSR W+     PPPL         A     SG    T        G  RVC N HGLIRKY +  CRQCFR  AKDIGF+K R
Sbjct:    1 MGHSNVWNSHPKNYGPGSRVWYGCFSPPPPLLHRPRRQIVALPGSISGLEYFTWMIPGIKIGVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 99          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: A0A367JG11_RHIAZ (40S ribosomal protein S29 n=5 Tax=Mucorineae TaxID=1344963 RepID=A0A367JG11_RHIAZ)

HSP 1 Score: 87.0 bits (214), Expect = 5.530e-21
Identity = 44/87 (50.57%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            MAHSNVWNSHP+ FGKGSR                                 RVCA++ GLIRKY +NICRQCFREYA DIGF K R
Sbjct:    1 MAHSNVWNSHPKTFGKGSRQ-------------------------------CRVCAHRAGLIRKYNLNICRQCFREYANDIGFHKYR 56          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: A0A061RP44_9CHLO (Small subunit ribosomal protein S29e n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RP44_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 5.530e-21
Identity = 42/87 (48.28%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            M H+ VWNSHP+ +GKGSRS                                RVC N+HGLIRKY +NICRQCFREYAKDIGF K++
Sbjct:    1 MGHAEVWNSHPKGYGKGSRS-------------------------------CRVCGNQHGLIRKYGLNICRQCFREYAKDIGFQKMK 56          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: E9J8N4_SOLIN (40S ribosomal protein S29 (Fragment) n=1 Tax=Solenopsis invicta TaxID=13686 RepID=E9J8N4_SOLIN)

HSP 1 Score: 88.2 bits (217), Expect = 9.930e-21
Identity = 43/87 (49.43%), Postives = 52/87 (59.77%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            M   N+W SHPRK+G+GSRS         C      + ++           SR CAN+HGLIRKY +NICRQCFREYA DIGF KV+
Sbjct:    1 MGFQNIWYSHPRKYGQGSRS---------CTKGYTNSAIKN----------SRACANRHGLIRKYGLNICRQCFREYAADIGFKKVK 68          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: F4NZV5_BATDJ (Uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4NZV5_BATDJ)

HSP 1 Score: 85.9 bits (211), Expect = 1.750e-20
Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXAPLQRESGGPALTGPSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKV 86
            MAH NV+NSHPR+FGKGSR                                 RVCA+K GLIRKY ++ICRQCFREYA DIGF+KV
Sbjct:    1 MAHDNVYNSHPRRFGKGSRQ-------------------------------CRVCAHKAGLIRKYNLDICRQCFREYASDIGFIKV 55          
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Match: A0A507B1M1_9PEZI (Uncharacterized protein n=1 Tax=Thyridium curvatum TaxID=1093900 RepID=A0A507B1M1_9PEZI)

HSP 1 Score: 86.7 bits (213), Expect = 1.830e-20
Identity = 46/93 (49.46%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    1 MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCXXXXXXA-PLQRESGGPALTGP-----SRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR 87
            M+H +VWNS PRK+GKGSRSW       F          +Q ++     T       SRVC ++ GLIRKY ++ICRQCFRE A DIGFVKVR
Sbjct:    1 MSHESVWNSRPRKYGKGSRSW-----RNFAGGEGTVGNQVQGDTEEACFTNVFVRNYSRVCTHRAGLIRKYGLDICRQCFREKAADIGFVKVR 88          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99766.22932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L8S7N3_CHLGU7.480e-2553.8540S ribosomal protein S29 n=1 Tax=Chloebia gouldia... [more]
RS29_GRIJA1.420e-2350.5740S ribosomal protein S29 n=1 Tax=Griffithsia japo... [more]
A0A6A5N100_LUPAL4.730e-2348.28Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A0D3HUX4_9ORYZ1.120e-2250.57Uncharacterized protein n=1 Tax=Oryza barthii TaxI... [more]
A0A0E0FCF3_9ORYZ1.840e-2249.49Uncharacterized protein n=1 Tax=Oryza meridionalis... [more]
A0A367JG11_RHIAZ5.530e-2150.5740S ribosomal protein S29 n=5 Tax=Mucorineae TaxID... [more]
A0A061RP44_9CHLO5.530e-2148.28Small subunit ribosomal protein S29e n=1 Tax=Tetra... [more]
E9J8N4_SOLIN9.930e-2149.4340S ribosomal protein S29 (Fragment) n=1 Tax=Solen... [more]
F4NZV5_BATDJ1.750e-2050.00Uncharacterized protein n=1 Tax=Batrachochytrium d... [more]
A0A507B1M1_9PEZI1.830e-2049.46Uncharacterized protein n=1 Tax=Thyridium curvatum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 53..86
e-value: 6.6E-10
score: 38.6
IPR03974440S ribosomal protein S29/30S ribosomal protein S14 type ZPANTHERPTHR1201040S RIBOSOMAL PROTEIN S29coord: 1..87
IPR018271Ribosomal protein S14, conserved sitePROSITEPS00527RIBOSOMAL_S14coord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99766contigM-pyrifera_M_contig99766:26..397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99766.22932.1mRNA_M-pyrifera_M_contig99766.22932.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99766 26..397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99766.22932.1 ID=prot_M-pyrifera_M_contig99766.22932.1|Name=mRNA_M-pyrifera_M_contig99766.22932.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp
MAHSNVWNSHPRKFGKGSRSWFVPPPLRFCCAAAAAAPLQRESGGPALTG
PSRVCANKHGLIRKYQMNICRQCFREYAKDIGFVKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001209Ribosomal_S14
IPR03974440S_S29/30S_S14z
IPR018271Ribosomal_S14_CS