prot_M-pyrifera_M_contig99759.22930.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99759.22930.1
Unique Nameprot_M-pyrifera_M_contig99759.22930.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length132
Homology
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BLAST of mRNA_M-pyrifera_M_contig99759.22930.1 vs. uniprot
Match: A0A5B1QBJ3_9AGAM (SWI/SNF complex subunit n=1 Tax=Dentipellis sp. KUC8613 TaxID=1883078 RepID=A0A5B1QBJ3_9AGAM)

HSP 1 Score: 51.2 bits (121), Expect = 7.370e-5
Identity = 26/92 (28.26%), Postives = 43/92 (46.74%), Query Frame = 0 
Query:   12 QWKPTRADARRDGFRIRRAVVGAHRAVLELHSKTPACTFTTEPLLARAIGVDAGTQDQILEAVWMYVEAHGLQDGTSPSSVQPDRVLRSLVG 103
            +W  T A    DGF IRR      +  + +H +     F   P L   +G+   ++  +++A+W Y++A GLQD      +  D  LR + G
Sbjct:  165 EWHRTPAQPTLDGFTIRRTGDTPTKVRIIIHLEHHPDQFKVHPDLGSVVGIREDSRSGVIQALWNYIKAQGLQDKVDRKRIHADAALRPIFG 256
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BLAST of mRNA_M-pyrifera_M_contig99759.22930.1 vs. uniprot
Match: A0A4Y9Y630_9AGAM (Uncharacterized protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9Y630_9AGAM)

HSP 1 Score: 51.2 bits (121), Expect = 8.470e-5
Identity = 26/92 (28.26%), Postives = 43/92 (46.74%), Query Frame = 0 
Query:   12 QWKPTRADARRDGFRIRRAVVGAHRAVLELHSKTPACTFTTEPLLARAIGVDAGTQDQILEAVWMYVEAHGLQDGTSPSSVQPDRVLRSLVG 103
            +W  T A    DGF IRR      +  + +H +     F   P L   +G+   ++  +++A+W Y++A GLQD      +  D  LR + G
Sbjct:  165 EWHRTPAQPTLDGFTIRRTGDTPTKVRIIIHLEHHPDQFKVHPDLGSVVGIREDSRSGVIQALWNYIKAQGLQDKVDRKRIHADAALRPIFG 256
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99759.22930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5B1QBJ3_9AGAM7.370e-528.26SWI/SNF complex subunit n=1 Tax=Dentipellis sp. KU... [more]
A0A4Y9Y630_9AGAM8.470e-528.26Uncharacterized protein n=1 Tax=Dentipellis fragil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036885SWIB/MDM2 domain superfamilyGENE3D1.10.245.10coord: 44..128
e-value: 1.4E-10
score: 43.0
IPR036885SWIB/MDM2 domain superfamilySUPERFAMILY47592SWIB/MDM2 domaincoord: 49..124
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 50..107
e-value: 2.4E-9
score: 36.9
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 9..132
NoneNo IPR availablePANTHERPTHR13844:SF7BRAHMA-ASSOCIATED PROTEIN OF 60 KDAcoord: 9..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99759contigM-pyrifera_M_contig99759:58..453 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99759.22930.1mRNA_M-pyrifera_M_contig99759.22930.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99759 58..471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99759.22930.1 ID=prot_M-pyrifera_M_contig99759.22930.1|Name=mRNA_M-pyrifera_M_contig99759.22930.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
MRLSALTRSWRQWKPTRADARRDGFRIRRAVVGAHRAVLELHSKTPACTF
TTEPLLARAIGVDAGTQDQILEAVWMYVEAHGLQDGTSPSSVQPDRVLRS
LVGPNRTSAAALVQAVLRSLRPQPAARIVHEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036885SWIB_MDM2_dom_sf
IPR003121SWIB_MDM2_domain