prot_M-pyrifera_M_contig99663.22907.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99663.22907.1
Unique Nameprot_M-pyrifera_M_contig99663.22907.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length134
Homology
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: A0A803P665_CANSA (Elongation factor Ts, mitochondrial n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803P665_CANSA)

HSP 1 Score: 64.7 bits (156), Expect = 1.410e-9
Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDALLEQEFIMDSGSVAEAVSKAGASVKSFV 127
            G  TV+ AI+++     E I L++A  + A   G V  YLH     G+G+ A VV+LE +D  +  E L+++ +++A+H+VA+ P  L +E      H   DAL  +  I+ S   AE+  K+  +++  V
Sbjct:  212 GETTVQNAITEVAAMMGENIKLRRAFVISASSQGVVSTYLHTSPQPGLGRIAGVVSLEVEDGNSQSEALQRVGSELAMHVVAAKPLFLTRE------HVTSDALENEREILKSQ--AESSGKSQMAIEKMV 334          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: A0A803P660_CANSA (Elongation factor Ts, mitochondrial n=5 Tax=Cannabis sativa TaxID=3483 RepID=A0A803P660_CANSA)

HSP 1 Score: 64.7 bits (156), Expect = 1.590e-9
Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDALLEQEFIMDSGSVAEAVSKAGASVKSFV 127
            G  TV+ AI+++     E I L++A  + A   G V  YLH     G+G+ A VV+LE +D  +  E L+++ +++A+H+VA+ P  L +E      H   DAL  +  I+ S   AE+  K+  +++  V
Sbjct:  212 GETTVQNAITEVAAMMGENIKLRRAFVISASSQGVVSTYLHTSPQPGLGRIAGVVSLEVEDGNSQSEALQRVGSELAMHVVAAKPLFLTRE------HVTSDALENEREILKSQ--AESSGKSQMAIEKMV 334          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: A0A7J6F038_CANSA (Elongation factor Ts, mitochondrial n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6F038_CANSA)

HSP 1 Score: 63.2 bits (152), Expect = 6.140e-9
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDALLEQEFIMDS 109
            G  TV+ AI+++     E I L++A  + A   G V  YLH     G+G+ A VV+LE +D  +  E L+++ +++A+H+VA+ P  L +E      H   DAL  +  I+ S
Sbjct:  385 GETTVQNAITEVAAMMGENIKLRRAFVISASSQGVVSTYLHTSPQPGLGRIAGVVSLEVEDGNSQSEALQRVGSELAMHVVAAKPLFLTRE------HVTSDALENEREILKS 491          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: UPI0009010304 (elongation factor Ts, mitochondrial n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009010304)

HSP 1 Score: 62.8 bits (151), Expect = 7.110e-9
Identity = 37/132 (28.03%), Postives = 75/132 (56.82%), Query Frame = 0
Query:    1 DGSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDALLEQEFIMDSGSVAEAVSKAGASVKSFV 127
            +G  TV+ AI+++     E + L++  A+     G +  YLH     GIG+ A +++LE +D+   ++ ++++ +++A+H+VA+ P  L KED+      + DAL  +  I+ S   AE+ +K+  +++  V
Sbjct:  205 NGEKTVQNAITELAAMMGENVKLRRGFAIANPSQGVMSTYLHTSPQQGIGRIAGILSLEVEDANTPLDAVQRIGSELAMHVVAAKPLFLTKEDV------SSDALDNEREILKSQ--AESTAKSAMAIEKMV 328          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: A0A118K102_CYNCS (Elongation factor Ts, mitochondrial n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118K102_CYNCS)

HSP 1 Score: 61.6 bits (148), Expect = 1.770e-8
Identity = 30/92 (32.61%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    1 DGSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKE 87
            +G  TVE AI+++     E I L++  A+   + G +  YLH     G+G+ A +++LE +D  A+++ ++++ +++A+H+VA+ P VL KE
Sbjct:  189 NGERTVENAITEVAAMMGENIKLRRGFAMSMSKHGVMSTYLHTCPQPGLGRIAGILSLEVEDENASLDAVQRVGSELAMHVVAAKPLVLTKE 280          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: A0A4D8YQU4_SALSN (Elongation factor Ts, mitochondrial n=2 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8YQU4_SALSN)

HSP 1 Score: 61.6 bits (148), Expect = 1.780e-8
Identity = 32/93 (34.41%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDI 89
            G  TV+ AI+++   T E + L    A+ A   G +  YLH     GIG+ A +++LE +D  A ++ ++++ + IA+H+VA+ P  L+KED+
Sbjct:  192 GEKTVQNAITEVAVMTGENVKLGGGFAISAPSYGVISTYLHTSPMPGIGRIAGLLSLEVEDKDAPLDAVQRVGSQIAMHLVAAKPLFLSKEDV 284          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: S8EF22_9LAMI (Elongation factor Ts (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EF22_9LAMI)

HSP 1 Score: 61.2 bits (147), Expect = 2.150e-8
Identity = 41/131 (31.30%), Postives = 71/131 (54.20%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDALLEQEFIMDSGSVAEAVSKAGASVKSFV 127
            G  T++ AI+++     E + L    A+ A   G +  YLH     G+G+ A VV+L+ +DS+A ++ +  + + +A+H+VA+ P  LAKED+        DAL  +E I+   S AE+  K+  ++   V
Sbjct:  145 GEKTLQNAIAEVAAMMGENVKLGGGFAISAPSHGVLSTYLHASPQPGLGRIAGVVSLDVEDSSAPLDSVRTVGSQLAMHVVAAKPLFLAKEDV------NSDALGNEEEIL--RSQAESTGKSETAIDKIV 267          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: A0A5J5A1H0_9ASTE (Elongation factor Ts, mitochondrial n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5A1H0_9ASTE)

HSP 1 Score: 60.8 bits (146), Expect = 3.050e-8
Identity = 32/103 (31.07%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKE----DIVEGEHK 95
            G  TV+ AI+++     E + L++  A+ +   G +  YLH     G+G+ A +++LE +D  A+++ L+++ +++A+H+VA+ P  L KE    D VE E +
Sbjct:  145 GEKTVQNAITEVAAMMGENVKLRRGFAMSSSSQGIISTYLHTRPQRGLGRIAGILSLEVEDGNASLDALQRVGSELAMHVVAAKPLFLTKELVSSDAVENERE 247          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: Q9SWW0_SOLLC (Elongation factor Ts, mitochondrial n=8 Tax=Solanoideae TaxID=424551 RepID=Q9SWW0_SOLLC)

HSP 1 Score: 60.8 bits (146), Expect = 3.330e-8
Identity = 38/131 (29.01%), Postives = 72/131 (54.96%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDALLEQEFIMDSGSVAEAVSKAGASVKSFV 127
            G  +V+ AI+++     E + L++  A+ A   G +  YLH     G+G+ A +++LE +D   + + L+++ +++A+H+VA+ P  L KED+      + DAL  +  I+ S   AE+  K   +V+  V
Sbjct:  198 GEKSVQNAITEVAAMMGENVKLRRGFAMSAPSLGVISTYLHTSPQPGVGRIAGILSLEVEDKNVSEDALQRVGSELAMHVVAAKPLFLTKEDV------SSDALSNEREILKSQ--AESSGKPQIAVEKMV 320          
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Match: A0A1R3G777_COCAP (Elongation factor Ts, mitochondrial n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3G777_COCAP)

HSP 1 Score: 60.5 bits (145), Expect = 4.550e-8
Identity = 38/131 (29.01%), Postives = 70/131 (53.44%), Query Frame = 0
Query:    2 GSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLH-----GIGKQAAVVALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDALLEQEFIMDSGSVAEAVSKAGASVKSFV 127
            G  TV+ A++++     E + L +   +     G V  YLH     G+G+ A +++LE ++  +N++ L+K+ +++A+HIVAS P  L KE +        DAL  +  I+ S   AE+  K+  +++  V
Sbjct:  199 GETTVQNAVTEVAAMMGENVKLSRGFVMSPSSNGVVSSYLHRSPKPGLGRMAGILSLEVENGISNLDALQKVGSELAMHIVASKPLFLTKELVTS------DALNNEREILKSQ--AESTGKSPMAIEKMV 321          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99663.22907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A803P665_CANSA1.410e-932.06Elongation factor Ts, mitochondrial n=1 Tax=Cannab... [more]
A0A803P660_CANSA1.590e-932.06Elongation factor Ts, mitochondrial n=5 Tax=Cannab... [more]
A0A7J6F038_CANSA6.140e-933.63Elongation factor Ts, mitochondrial n=2 Tax=Cannab... [more]
UPI00090103047.110e-928.03elongation factor Ts, mitochondrial n=2 Tax=Ipomoe... [more]
A0A118K102_CYNCS1.770e-832.61Elongation factor Ts, mitochondrial n=1 Tax=Cynara... [more]
A0A4D8YQU4_SALSN1.780e-834.41Elongation factor Ts, mitochondrial n=2 Tax=Salvia... [more]
S8EF22_9LAMI2.150e-831.30Elongation factor Ts (Fragment) n=1 Tax=Genlisea a... [more]
A0A5J5A1H0_9ASTE3.050e-831.07Elongation factor Ts, mitochondrial n=2 Tax=Nyssac... [more]
Q9SWW0_SOLLC3.330e-829.01Elongation factor Ts, mitochondrial n=8 Tax=Solano... [more]
A0A1R3G777_COCAP4.550e-829.01Elongation factor Ts, mitochondrial n=2 Tax=Corcho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014039Translation elongation factor EFTs/EF1B, dimerisationPFAMPF00889EF_TScoord: 4..91
e-value: 7.6E-15
score: 55.1
IPR036402Elongation factor Ts, dimerisation domain superfamilyGENE3D3.30.479.20coord: 40..133
e-value: 1.6E-15
score: 58.9
IPR036402Elongation factor Ts, dimerisation domain superfamilySUPERFAMILY54713Elongation factor Ts (EF-Ts), dimerisation domaincoord: 27..132
NoneNo IPR availablePANTHERPTHR11741:SF0ELONGATION FACTOR TS, MITOCHONDRIALcoord: 6..128
IPR001816Translation elongation factor EFTs/EF1BPANTHERPTHR11741ELONGATION FACTOR TScoord: 6..128
IPR001816Translation elongation factor EFTs/EF1BHAMAPMF_00050EF_Tscoord: 1..133
score: 12.483

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99663contigM-pyrifera_M_contig99663:214..615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99663.22907.1mRNA_M-pyrifera_M_contig99663.22907.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99663 214..615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99663.22907.1 ID=prot_M-pyrifera_M_contig99663.22907.1|Name=mRNA_M-pyrifera_M_contig99663.22907.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp
DGSGTVEEAISKMIFSTKETISLKKALAVQAKEGGAVGVYLHGIGKQAAV
VALEAKDSTANVEQLEKLATDIAIHIVASSPKVLAKEDIVEGEHKADDAL
LEQEFIMDSGSVAEAVSKAGASVKSFVHALQGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014039Transl_elong_EFTs/EF1B_dimer
IPR036402EF-Ts_dimer_sf
IPR001816Transl_elong_EFTs/EF1B