mRNA_M-pyrifera_M_contig101047.229.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A354B8D3_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B8D3_9ACTN) HSP 1 Score: 145 bits (365), Expect = 5.000e-41 Identity = 75/126 (59.52%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 1 ADGPPECVGERLEPFVEVLDDRWTGYAHRAGVDVDVSAST-MGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 A+ P + G+RLEP V LDDRW GYA RAG D+++ A + HPVVW SLANR+FA +LVDG WVHTRS VRHL G V+E W VDRF+T+ G RAVVD+R+TVDG V VEHEAI+ L Sbjct: 106 AETPSKASGKRLEPLVVELDDRWVGYAARAGEDLELYAGQQLVHPVVWPSLANRVFAAQLVDGAWVHTRSRVRHLGIAAPGDAVVIESWEVDRFSTRGGERAVVDLRMTVDGRPVCAVEHEAIVRL 231
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A2E0ZS34_9ACTN (Enoyl-CoA hydratase 2 n=3 Tax=root TaxID=1 RepID=A0A2E0ZS34_9ACTN) HSP 1 Score: 123 bits (309), Expect = 1.810e-32 Identity = 67/126 (53.17%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 4 DGPP-ECVGERLEPFVEVLDDRWTGYAHRAGVDVDV-SASTMGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 DGP + + LEP VE L W GY R G D+ + S + + HP VW +LAN + R LV+GPWVHTRS +RH GATA+VE VVDRF T++G+RAV+D+RI+VDGELVA +EHEA++ L Sbjct: 114 DGPSTRPLHQPLEPQVEALXGEWDGYGLRTGDDLGLYSEAGIIHPAVWPALANSVVKRNLVEGPWVHTRSRIRHHGTAQVGATALVEAVVVDRFETRSGSRAVLDIRISVDGELVASLEHEALVSL 239
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A7C7SBQ3_9ACTN (Enoyl-CoA hydratase 2 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7C7SBQ3_9ACTN) HSP 1 Score: 119 bits (299), Expect = 5.440e-31 Identity = 63/119 (52.94%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 22 VGERLEPFVEVLDDRWTGYAHRAGVDVDVSAST-MGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 + E+LEP VE L W Y RAG D+ + A + HP VW +LAN + R LVDG W+HTRS +RH GATA V+ VVDRF T++G RAV+DV I+VDG LVA +EHEAI+ L Sbjct: 121 LNEQLEPHVEPLTGGWADYGLRAGDDLGIYAEAGIVHPAVWPALANGVMTRHLVDGAWIHTRSRIRHHGIARVGATATVQATVVDRFETRSGTRAVLDVTISVDGALVATIEHEAIVAL 239
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A2E5P2H9_9ACTN (Enoyl-CoA hydratase 2 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5P2H9_9ACTN) HSP 1 Score: 119 bits (299), Expect = 6.420e-31 Identity = 62/119 (52.10%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 22 VGERLEPFVEVLDDRWTGYAHRAGVDVDVSAST-MGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 + ERL VE L DRWT YA RAG D+ + A + HP VW +LAN + R LV+GPW+HT S + H +A G +A+VE V+DRF T++G+RAVVDVRI+VDG V +EHEA++ L Sbjct: 127 LSERLPDHVEPLVDRWTNYAERAGADLSLCADAGVVHPSVWPALANGVITRHLVEGPWIHTGSRIVHHAAAPVGVSALVEATVIDRFNTRSGSRAVVDVRISVDGLPVVTIEHEALVSL 245
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A2E7X7Y1_9ACTN (Enoyl-CoA hydratase 2 n=3 Tax=root TaxID=1 RepID=A0A2E7X7Y1_9ACTN) HSP 1 Score: 110 bits (274), Expect = 3.030e-27 Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = 1 Query: 34 LEPFVEVLDDRWTGYAHRAGVDVDV-SASTMGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 L+ VE L W Y RAG D+ + S + + HP VW +LAN + R LV GPWVHTRS +RH T GATAV++ VV+RF T++G+RAV++V+I+VDGE VA +EHEA++ L Sbjct: 124 LQRHVEPLVGEWDDYGLRAGDDLGLYSEAGIVHPAVWTALANSVVKRNLVAGPWVHTRSHIRHHCTATVGATAVIDAVVVNRFETRSGSRAVIEVQISVDGEPVASLEHEALVSL 238
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A2E5ZEY0_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E5ZEY0_9ACTN) HSP 1 Score: 100 bits (250), Expect = 1.180e-23 Identity = 56/119 (47.06%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 22 VGERLEPFVEVLDDRWTGYAHRAGVDVDVSAST-MGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 GE L +E LD YA RAG D + A + HP W +LAN +F R LVDGPW+HTRS + H +AV G + +VE VVDR + G R VVDV +++DG VA V HEA++ L Sbjct: 122 AGEVLPARLEALDGAHADYARRAGEDFGLYAQEGLVHPCAWPTLANAVFVRHLVDGPWIHTRSRIVHHAAVAVGESVLVEATVVDRLEARRGTRVVVDVEVSLDGIPVASVRHEALVHL 240
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A2E9JBB7_9ACTN (Enoyl-CoA hydratase 2 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E9JBB7_9ACTN) HSP 1 Score: 99.8 bits (247), Expect = 2.840e-23 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 28 ERLEPFVEVLDDRWTGYAHRAGVDVDVSASTMG--HPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 E LE L D W+ Y RAG D ++ S +G HP VW SLAN + + LV+G WVHTRS + H V G+TA VE V++RF T+ G RA+VDV ++VDGE + +EHEAI+ L Sbjct: 121 ELLETEEIHLTDEWSDYGQRAGDDHEIY-SELGVIHPAVWPSLANYIVEKNLVNGAWVHTRSKICHHGLVQIGSTATVESSVINRFKTRTGNRAIVDVSVSVDGEKLIDIEHEAIVSL 237
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A2E8X6D8_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E8X6D8_9CHLR) HSP 1 Score: 90.5 bits (223), Expect = 3.300e-21 Identity = 47/83 (56.63%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 127 HPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 HP +W ++AN + R LVDG W+HTRS + H +V G+ A VE +VV RF T+AG R V++V ITVDGE VA VEHEAII L Sbjct: 11 HPAIWPAVANHVVERNLVDGAWIHTRSKIFHHDSVQIGSIATVESYVVRRFETRAGDRVVINVSITVDGEKVADVEHEAIISL 93
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A6I3AGC9_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3AGC9_9ACTN) HSP 1 Score: 92.0 bits (227), Expect = 2.860e-20 Identity = 58/122 (47.54%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 16 ECVGERLEPFVEVLDDRW-TGYAHRAGVDVDVSAST-MGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 E GE L LDD YA RAG D+D+ + HP VW SLAN +F++ELV GPW+HTRS + H + A A + VVDRF ++G RAVVD+ I DG +V +EHEAII L Sbjct: 121 ERPGEDLPVHRFALDDNHGPDYAVRAGDDLDIFVERGIVHPAVWPSLANGVFSKELVRGPWIHTRSRITHHALARANADIEITSRVVDRF-VRSGERAVVDMTIRADGAIVCSIEHEAIIDL 241
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Match: A0A3C2AXV2_9ACTN (Enoyl-CoA hydratase 2 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2AXV2_9ACTN) HSP 1 Score: 89.0 bits (219), Expect = 7.890e-19 Identity = 58/119 (48.74%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 25 GERLEPFVEVLDDRW-TGYAHRAGVDVDV-SASTMGHPVVWISLANRLFARELVDGPWVHTRSAVRHLSAVTAGATAVVEGWVVDRFATQAGARAVVDVRITVDGELVAVVEHEAIIGL 375 GE L L W + Y RAG D+ + HP VW +LAN L E+ G WVHTRS VRH AGATA V G VV RF G RAV+DV IT+DG++VA +EHEAI+ L Sbjct: 162 GEALPAKRVELRGEWGSDYGARAGDPFDLYQQHGVVHPAVWPALANHLVHTEVARGSWVHTRSIVRHHGLAPAGATAEVRGTVVRRFQAH-GERAVLDVHITIDGQVVASLEHEAIVAL 279 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101047.229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig101047.229.1 >prot_M-pyrifera_M_contig101047.229.1 ID=prot_M-pyrifera_M_contig101047.229.1|Name=mRNA_M-pyrifera_M_contig101047.229.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=129bp ADGPPECVGERLEPFVEVLDDRWTGYAHRAGVDVDVSASTMGHPVVWISLback to top mRNA from alignment at M-pyrifera_M_contig101047:8..394+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig101047.229.1 ID=mRNA_M-pyrifera_M_contig101047.229.1|Name=mRNA_M-pyrifera_M_contig101047.229.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig101047:8..394+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig101047:8..394+ >mRNA_M-pyrifera_M_contig101047.229.1 ID=mRNA_M-pyrifera_M_contig101047.229.1|Name=mRNA_M-pyrifera_M_contig101047.229.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig101047:8..394+ (Macrocystis pyrifera P11B4 male)back to top |