mRNA_M-pyrifera_M_contig99401.22873.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: A0A2E5X517_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X517_9BACT) HSP 1 Score: 104 bits (259), Expect = 3.200e-22 Identity = 83/252 (32.94%), Postives = 111/252 (44.05%), Query Frame = 1 Query: 1 DPQLAAQVQHIAESVPDPWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEW----VRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFELEAARLSLEGEEARSTRDSREGELRALMGLHAEAEVQLVPG----------------PLPLTALPSVDLAALPDT----SPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPIWN 684 DP L I+ESVPDPWV+ G+ F +PL+ A A A A +LEAEW VW + ++ WIEW +RL E ER A + ++ L + GE+ R EA LF++E + R LR L G A+A Q + G PD +P L RLR E+ +E ALR + +Q P+ LGPL E D GQ+R G G L +P N Sbjct: 133 DPGLELSALRISESVPDPWVISPGLSFSIPLSGRLGAERGLAEAERKAAAGAVLEAEWSVWRDVQVAWIEWSAVRLRLEETER----LALDMEGLVTTTTELAERGEIPRTEASLFQVEELQ--------------RRNRLRRLAG-EADAGRQRLLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDAIELRNPGLERLRHEYRVSEQALRHEIRKQYPDLTLGPLFESDAGQSRVGFLGALPIPFLN 365
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: A0A520XI24_9ACTN (TolC family protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XI24_9ACTN) HSP 1 Score: 89.0 bits (219), Expect = 5.310e-17 Identity = 69/230 (30.00%), Postives = 103/230 (44.78%), Query Frame = 1 Query: 1 DPQLAAQVQHIAESVPDPWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFELEAARLSLEGEEARSTRDSREGELRALMGLHAEAEVQLVPGPLPLTALPSVD--LAALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPIWN 684 DP+ I P+ GL + +P++ + RA A R +++AEW ++ W W ER R +RE + + L GEL RVE+ LF++E A EA L LMGL A+A V+LVP LP P D L L +++ EL RAE+ E ALRL + +Q P+ +G ++ R +G + +PI+N Sbjct: 116 DPEFGFDGAEILSPSGSPFEFGLTLNLTIPISGRLEVEKTRAGAAYEAELRRIVDAEWATRADVRRSWASWTVAEERLRLLREAIAQIERITAITDRLEAGGELSRVESRLFQVELADRRAAVAEAELDATRSRINLLGLMGLPADASVELVPA-LPTADPPLSDDPLRRLIESNTELAVRRAEYQVVEEALRLEIRKQYPDITIGSGYGSEDNDDRLILGFSVPIPIFN 344
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: UPI0013A5D9B1 (TolC family protein n=1 Tax=Geomonas oryzae TaxID=2364273 RepID=UPI0013A5D9B1) HSP 1 Score: 76.3 bits (186), Expect = 1.890e-12 Identity = 70/241 (29.05%), Postives = 111/241 (46.06%), Query Frame = 1 Query: 1 DPQLAAQVQHIAESVP---DPWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAEL----LWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFELEAARLSLEGEEARSTRDSREGELRALMGLHAEAEVQL------VPGPLPLTALPSVDLAALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPIWN 684 DP + QH +++ PW +G ++ + +R R+ +A A + +A WRV S E L+ E +R QAEV+S + +A AGE + L R+ L EAR L + +G+ EA L + P PL A + AL + P+++ L ++++AAEAALRL +A Q P+ RLGP + D+G + IG + LP++N Sbjct: 101 DPSIGFTPQHHSDTAGGTLSPWSLGFNLDIPIETAGKRGYRILQAEKRSDAARLHIADAAWRVRSRLESSLCDLYAEMEAEPLLQRQEAAQAEVVSLLEARLA----AGEASLPDVTRSRLALERIRLLKMEARKRLAQSRVALASALGVPKEAVDGLDISFGFIDAPFPLPAAGELRRQALTNR-PDILALLSDYEAAEAALRLEIAAQYPDLRLGPGYQWDQGDDVWSIGFSVTLPVFN 336
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: UPI001FACBEC3 (TolC family protein n=1 Tax=Methylobacter sp. S3L5C TaxID=2839024 RepID=UPI001FACBEC3) HSP 1 Score: 68.9 bits (167), Expect = 6.040e-10 Identity = 55/217 (25.35%), Postives = 102/217 (47.00%), Query Frame = 1 Query: 52 PWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFELEAARLSLEGEEARSTRDSREGELRALMGLHAEA--EVQL----VPGPLPLTALPSVDL--AALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPI 678 PW+ + + +RD R+ +A A + +A W L +E E ER +++Q + A + + + AGE+ R+E + +L L AR L A +G+ +A +++L + P L ++P+ +L AL + S +L+ A++DAA++AL+L +A Q PN + P + G+ R+ +G + LP+ Sbjct: 124 PWIAASAISIPIETAGKRDFRIKKADHLADAARLRIRDAAWLARGRLRLAMLEVFAAQEAERLLQQQVSIQKAMSERLEQQLSAGEISRLEVMRAHITLNQLQLNVSTARKRVAESRVMLAASIGVGVDALSDIKLDFTTLSKPSVLDSIPTQNLKEVALRERS-DLLAALADYDAAQSALQLEIANQYPNIQANPGYAWEMGEHRWALGATMPLPV 339
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: A0A2E7Y7T6_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A2E7Y7T6_9PLAN) HSP 1 Score: 66.2 bits (160), Expect = 5.010e-9 Identity = 59/214 (27.57%), Postives = 94/214 (43.93%), Query Frame = 1 Query: 52 PWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFELEAARLSLEGEEARSTRDSREGELRALMGLHAEAEVQLVPGPLPLTALPSVD--LAALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPIWNA 687 P+ GL +P++ + RATA RTL++AEW+ ++ W W ++ + + L + L AGEL+RVE L ++E A ++ E E L ++GL A +L P P + VD A L +++ EL AE+ AE LRL + +Q P+ +G + R G + +PI NA Sbjct: 132 PFEFGLMGSLTIPISGRLEVEKDRATAAYEAQLRTLVDAEWQTRADLRRAWARWAAVAAQAELLTGMIVELQRISEIARHLEVAGELNRVERRLLQIELADRRMQATEMDLLLIDAENVLLDILGLPPSAVQKLQPS-FPGVTISEVDDVTARLIESNTELAVHFAEYQTAEDTLRLEIKKQFPDIVIGSGYGTEFNDHRVMFGISVPVPILNA 344
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: UPI0019D13F55 (TolC family protein n=1 Tax=Acidithiobacillus sp. MC6.1 TaxID=2801580 RepID=UPI0019D13F55) HSP 1 Score: 64.3 bits (155), Expect = 1.580e-8 Identity = 62/234 (26.50%), Postives = 104/234 (44.44%), Query Frame = 1 Query: 7 QLAAQVQHIAESVPDPWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFELEAARLSLEGEEARSTRDSREGELRALMGLHAEA------EVQLVPGPLPLTALPS--VDLAALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPIWN 684 +L +Q + E+ PW GL + + +R R+A+A + A + EA W + S+ ++++ E+ + + + + + + + AGE + L+ R L A++ L +GL A V P L LPS V AAL + +L + A + AAEAAL+L VA+Q P+ RLGP ++G R+G+ L LP+ N Sbjct: 24 KLLSQHHSLTEASVLPWTFGLAFDIPIETAGKRGDRIAQAQSLATAAHFQVGEAAWLLRSQVRQRFLDYFAALEQTKLLEAETATRAQMLALMQQRLVAGESAAFDVSTALLDLQRAHLAQARAQAQEAGTRAALAQALGLPVRALNGVEFSFADVEQPPTLQQLPSAAVQRAALLNRL-DLRQALARYAAAEAALKLQVAKQYPDLRLGPGYGWEQGDNRWGLSISLTLPLLN 256
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: UPI000372FBA5 (TolC family protein n=1 Tax=Bordetella sp. FB-8 TaxID=1159870 RepID=UPI000372FBA5) HSP 1 Score: 64.7 bits (156), Expect = 1.620e-8 Identity = 71/250 (28.40%), Postives = 106/250 (42.40%), Query Frame = 1 Query: 1 DPQLAAQVQHIAESVPDPWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFE---LEAARLSLEGEEARSTRDSREGELRALMGLHAEAEVQLVPGPLPLTALPSVDL-------------------AALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPIWN 684 +P L + A + PW VG V F + R AR+A+A A A + + W++ + VR + + +QA L+A S+A R +AG+ L A L+ E + D R L A + + G LP+ AL VDL +AL + P+++ A + AAEAALRLAVAQQ P +GP D+G +F + L LP++N Sbjct: 99 NPTLQLAPTYDATTTAPPWTVGPVVTFLIQSYGARPARIAQARARTEQARQAIDVTAWQLRDQ--------VRSAMLDLWSAQQAATLAAQRVSLADRYRDAVTQRYQAGMVSAATLTTATLAFNQAELQLASDRRASRL-------ARSALAAALG-LPIAALDGVDLDMRGIIHPRQPGRLESLVHSAL-TSRPDVLAALAHYAAAEAALRLAVAQQYPAIDIGPGYHYDQGDNKFIVSFSLPLPVFN 331
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: UPI000AB50CEF (TolC family protein n=1 Tax=Thiomonas sp. FB-Cd TaxID=1158292 RepID=UPI000AB50CEF) HSP 1 Score: 63.5 bits (153), Expect = 4.030e-8 Identity = 77/255 (30.20%), Postives = 107/255 (41.96%), Query Frame = 1 Query: 1 DPQLAAQVQHIAESVPDPWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFE---LEAARLSL---EGEEARSTRDSREGE--LRALMGLHAEAEVQLVPGPLPLTALPSVDL-------------------AALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALPIWN 684 +P L + + PW VG V F + R AR+A+A A A + W++ + VR + + +QA L+A +S+A R +AG+ L A L+L E E A R SR G L A +GL P TAL VDL +AL + P+++ A + AAEAALRLAVAQQ P +GP D+G +F + L LPI N Sbjct: 104 NPNLQLAPTYDTTTPAPPWTVGPVVTFLIQSYGARPARIAQARARTEQAREAIAVTAWQLRGQ--------VRTAMLDLWAAQQAAALAAQRASLAERYREVVAQRYQAGMVSAATLTTATLALNQAELELASQRRASRLGRASLAAALGL-------------PTTALDGVDLDMRGIAHPRQPGRLEPLIHSAL-TSRPDVLAALAHYAAAEAALRLAVAQQYPAIDIGPGYHYDQGDNKFILSISLPLPILN 336
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: A0A6M8W240_9BACT (TolC family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A6M8W240_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 4.960e-8 Identity = 63/193 (32.64%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 52 PWVVGLGVEFELPLTD----ERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEAGLFELE-AARLSLEGEEARSTRDSREGELRALMGLHAEAEVQLVPGPLPLTALPSVDLAALPDTSPELMRLR-AEFDAAEAALRLAVAQQVPNPRLG 612 P+ G ++F LP++ ERD A A + R + +AEWR E W W + + E L S L AGE+ RV+A LF E AA+ + + R R +R +L A+ GL + L+PG L P LA+ S L+ +R AE+ AAE ALRL V +Q P+ +G Sbjct: 61 PFEFGFSLQFTLPVSGRLGIERDLAGAEHEAQL----RRVADAEWRTRIEVRRRWTRWTTAALQLDLHNEALAQLERIISLTDQLEAAGEIRRVDARLFRAELAAQRAAHTDAERQARQARL-DLLAIAGLPPATTIDLIPGLPTLPVKPDPTLASRMIESNTLLAVRRAEYQAAEHALRLEVRKQYPDITIG 248
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Match: UPI001F5C8F07 (TolC family protein n=1 Tax=Phenylobacterium aquaticum TaxID=1763816 RepID=UPI001F5C8F07) HSP 1 Score: 62.8 bits (151), Expect = 6.620e-8 Identity = 67/229 (29.26%), Postives = 103/229 (44.98%), Query Frame = 1 Query: 10 LAAQVQHIAESVPDPWVVGLGVEFELPLTDERDARVARATAGVVVAERTLLEAEWRVWSEAELLWIEWVRLSERERHIREQAEVLSAFASSIAGLVDAGELDRVEA--GLFELEAARLSLEGEEARSTRDSREGELRALMGL--HAEAEVQLVP---GPLPLTALPSVDLAALPDTSPELMRLRAEFDAAEAALRLAVAQQVPNPRLGPLLEVDEGQTRFGIGGVLALP 675 L+ ++ ES PW G + + R R+ A + A+ +++A W V + IE + R ++ ++ A+ + V AGE R A +L AAR L +AR T+ L A +G+ A A ++L P P P A+P+ A S +++R A++DAAEAALR+ VA+Q P RLGP D G + L LP Sbjct: 90 LSLTAEYAHES--SPWAYGAAADVPVDAGARRAGRLTAADLTALQAQYDVIQAVWTVRTNLAKARIELLSAEAEIRLAQDLVDLRDQRAARLNARVVAGEDARPVALQAAADLAAARHRLADAQARRTQAV--SSLAAALGVPPQAVATLRLAPLETAPAPPAAIPAQRAEAAAGRS-DVLRAIADYDAAEAALRVEVARQYPEVRLGPGYSWDHGLAKLPFSLGLTLP 313 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99401.22873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig99401.22873.1 >prot_M-pyrifera_M_contig99401.22873.1 ID=prot_M-pyrifera_M_contig99401.22873.1|Name=mRNA_M-pyrifera_M_contig99401.22873.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=229bp DPQLAAQVQHIAESVPDPWVVGLGVEFELPLTDERDARVARATAGVVVAEback to top mRNA from alignment at M-pyrifera_M_contig99401:2..688+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig99401.22873.1 ID=mRNA_M-pyrifera_M_contig99401.22873.1|Name=mRNA_M-pyrifera_M_contig99401.22873.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=687bp|location=Sequence derived from alignment at M-pyrifera_M_contig99401:2..688+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig99401:2..688+ >mRNA_M-pyrifera_M_contig99401.22873.1 ID=mRNA_M-pyrifera_M_contig99401.22873.1|Name=mRNA_M-pyrifera_M_contig99401.22873.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1374bp|location=Sequence derived from alignment at M-pyrifera_M_contig99401:2..688+ (Macrocystis pyrifera P11B4 male)back to top |