prot_M-pyrifera_M_contig99387.22864.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99387.22864.1
Unique Nameprot_M-pyrifera_M_contig99387.22864.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length70
Homology
BLAST of mRNA_M-pyrifera_M_contig99387.22864.1 vs. uniprot
Match: A0A358A2X2_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A2X2_9ACTN)

HSP 1 Score: 81.6 bits (200), Expect = 5.780e-19
Identity = 41/70 (58.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 LTVALDVTPLAGAPTGIHQVTKGLLRSLRHRDDVDVRGWMLSARGRPPDIDIPVRHSRIPAAVALRGWAR 70
            L V +D+TPL G PTGIHQ T+ L  +L  RDDV V GW+LSARG  P    P+R S IPAA A R WAR
Sbjct:    2 LRVGIDITPLVGPPTGIHQHTRHLTDALLSRDDVTVSGWLLSARGSKPRFAGPIRRSPIPAAPAARLWAR 71          
BLAST of mRNA_M-pyrifera_M_contig99387.22864.1 vs. uniprot
Match: A0A2E0SYE8_9ACTN (Glycos_transf_1 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0SYE8_9ACTN)

HSP 1 Score: 82.8 bits (203), Expect = 3.950e-17
Identity = 41/70 (58.57%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    1 LTVALDVTPLAGAPTGIHQVTKGLLRSLRHRDDVDVRGWMLSARGRPPDIDIPVRHSRIPAAVALRGWAR 70
            L V +D+TPL G PTGIHQ T+ L  +L  RDDV V GW+LSARGR P    P+R S IPA+ A R WAR
Sbjct:    3 LRVGIDITPLVGPPTGIHQHTRHLTDALLSRDDVTVSGWLLSARGRKPRFAGPIRRSPIPASPAARLWAR 72          
BLAST of mRNA_M-pyrifera_M_contig99387.22864.1 vs. uniprot
Match: A0A2E7NGS8_9BACT (Glycos_transf_1 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E7NGS8_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 1.370e-9
Identity = 34/74 (45.95%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    1 LTVALDVTPLAGAPTGIHQVTKGLLRSLRHRDDVDVRGWMLSARGRPPDIDIP----VRHSRIPAAVALRGWAR 70
            L VALDVTPLAG PTGI +   G+L +L     + + GWMLS R R     +P    V H  +PA +   GWAR
Sbjct:    5 LRVALDVTPLAGEPTGIARAVDGVLHALWTDQSLAISGWMLSGRRRARPDGVPAGMSVHHCPVPARLLHPGWAR 78          
BLAST of mRNA_M-pyrifera_M_contig99387.22864.1 vs. uniprot
Match: A0A381YZU4_9ZZZZ (Glycos_transf_1 domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381YZU4_9ZZZZ)

HSP 1 Score: 60.5 bits (145), Expect = 4.830e-9
Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    1 LTVALDVTPLAGAPTGIHQVTKGLLRSLRHRDDVDVRGWMLSARGR--PPDID--IPVRHSRIPAAVALRGWAR 70
            L VALDVTPLAG PTGI +   G++ +L     + V GWMLS R R  P  +   +PV H  +PA +    WAR
Sbjct:    5 LRVALDVTPLAGEPTGIARAINGVIHALCADPSLAVSGWMLSGRRRAHPSGVPSGVPVHHCPVPARLLHPSWAR 78          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99387.22864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A358A2X2_9ACTN5.780e-1958.57Uncharacterized protein (Fragment) n=1 Tax=Acidimi... [more]
A0A2E0SYE8_9ACTN3.950e-1758.57Glycos_transf_1 domain-containing protein n=2 Tax=... [more]
A0A2E7NGS8_9BACT1.370e-945.95Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
A0A381YZU4_9ZZZZ4.830e-945.95Glycos_transf_1 domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99387contigM-pyrifera_M_contig99387:15..224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99387.22864.1mRNA_M-pyrifera_M_contig99387.22864.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99387 15..224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99387.22864.1 ID=prot_M-pyrifera_M_contig99387.22864.1|Name=mRNA_M-pyrifera_M_contig99387.22864.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=70bp
LTVALDVTPLAGAPTGIHQVTKGLLRSLRHRDDVDVRGWMLSARGRPPDI
DIPVRHSRIPAAVALRGWAR
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